Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_022300156 chr1:101106778-101138652 31874 156 3 852 57 0 80 0 DPH5
SE_02_022300023 chr1:101282798-101325614 42816 23 4 1135 62 4 97 0 S1PR1
SE_02_022300242 chr1:107918728-107966752 48024 242 6 1194 92 1 150 280 VAV3
SE_02_022300107 chr1:110780228-110790314 10086 107 1 302 29 1 3 0 CD53
SE_02_022300051 chr1:111211447-111232453 21006 51 1 589 74 1 14 247 CHI3L2,LOC149620,DENND2D
SE_02_022300106 chr1:115530853-115566480 35627 106 2 1034 70 1 53 0 VANGL1
SE_02_022300240 chr1:116497382-116518466 21084 240 2 522 23 1 11 55 CD58
SE_02_022300232 chr1:12469598-12482754 13156 232 1 364 2 0 136 0 VPS13D,SNORA59A
SE_02_022300243 chr1:155971849-155984447 12598 243 1 269 14 0 114 568 ARHGEF2,SCARNA4,SSR2,RXFP4,KIAA0907
SE_02_022300052 chr1:158244369-158294095 49726 52 3 1476 69 3 0 886 CD1A,CD1C,CD1B
SE_02_022300040 chr1:158327039-158337177 10138 40 1 373 20 0 0 429 CD1B,CD1E,CD1C
SE_02_022300113 chr1:158352320-158365960 13640 113 2 460 53 3 0 519 CD1E,OR10T2,CD1B
SE_02_022300114 chr1:158388894-158409240 20346 114 2 597 71 0 0 132 OR10T2,OR10K2,CD1E
SE_02_022300041 chr1:160518942-160581202 62260 41 6 1913 176 11 73 1388 CD84,SLAMF6
SE_02_022300223 chr1:165826702-165872120 45418 223 4 1282 47 2 114 208 UCK2,MIR3658
SE_02_022300177 chr1:167088266-167132577 44311 177 3 1380 142 10 167 1090 DUSP27,GPA33
SE_02_022300032 chr1:167599576-167639191 39615 32 2 1095 110 6 47 155 RCSD1,CREG1
SE_02_022300202 chr1:198612013-198659681 47668 202 5 1302 44 8 93 50 PTPRC
SE_02_022300005 chr1:199004714-199059073 54359 5 4 1284 14 11 101 211 MIR181A1
SE_02_022300030 chr1:207858734-207909204 50470 30 3 1339 167 5 198 1461 CD34,LOC148696
SE_02_022300196 chr1:228789559-228806306 16747 196 1 409 43 0 0 0 RHOU
SE_02_022300155 chr1:228883721-228915845 32124 155 4 884 43 3 0 164 RHOU
SE_02_022300073 chr1:230241147-230284393 43246 73 3 1476 75 4 76 1357 GALNT2,PGBD5
SE_02_022300194 chr1:234165789-234176894 11105 194 1 314 1 0 5 0 SLC35F3,C1ORF31
SE_02_022300217 chr1:234719204-234732888 13684 217 1 398 20 2 70 673 NCRNA00184
SE_02_022300263 chr1:247315309-247334337 19028 263 2 545 58 5 57 671 ZNF496
SE_02_022300222 chr1:26691153-26699119 7966 222 1 154 11 1 324 600 ARID1A
SE_02_022300102 chr1:27621025-27664916 43891 102 3 1171 85 2 116 803 FGR,IFI6,AHDC1
SE_02_022300162 chr1:31822217-31851978 29761 162 2 766 70 3 0 0 SPOCD1
SE_02_022300127 chr1:41865579-41899756 34177 127 5 908 78 4 63 0 HIVEP3
SE_02_022300207 chr1:54471226-54482442 11216 207 1 296 5 1 51 0 SSBP3
SE_02_022300014 chr1:94060624-94114611 53987 14 3 1649 59 35 218 916 ABCA4
SE_02_022300174 chr10:11144309-11182123 37814 174 3 1200 32 10 181 201 CELF2
SE_02_022300176 chr10:119476974-119519986 43012 176 5 1272 44 1 72 174 RGS10
SE_02_022300213 chr10:26435345-26452052 16707 213 2 453 124 4 0 198 APBB1IP
SE_02_022300257 chr10:31132172-31148415 16243 257 3 443 27 1 57 0 ZNF438
SE_02_022300158 chr10:46075328-46099705 24377 158 2 220 137 2 0 0 MSMB,NCOA4,AGAP7
SE_02_022300173 chr10:47247608-47280379 32771 173 3 246 39 4 61 0 GDF2,GDF10
SE_02_022300087 chr10:61749329-61782808 33479 87 2 817 50 5 184 137 C10ORF107,ARID5B
SE_02_022300064 chr10:6539289-6602485 63196 64 7 1776 29 9 91 486 LOC439949,PRKCQ
SE_02_022300198 chr10:71724851-71759381 34530 198 4 1126 77 2 122 2326 CDH23,C10ORF54,C10ORF105
SE_02_022300049 chr10:71859110-71897888 38778 49 5 1163 109 3 4 51 PSAP,CDH23
SE_02_022300090 chr10:72317875-72338301 20426 90 2 598 37 0 81 847 DNAJB12,DDIT4
SE_02_022300085 chr10:88374118-88393091 18973 85 2 425 25 1 37 0 RNLS,ANKRD22
SE_02_022300048 chr10:90927697-90949966 22269 48 1 663 60 3 50 0 ANKRD1
SE_02_022300024 chr10:96286587-96336931 50344 24 2 1369 78 1 90 600 DNTT,OPALIN,BLNK
SE_02_022300179 chr11:118301031-118321308 20277 179 2 542 53 2 45 749 CD3E,CD3G,MPZL3,MPZL2,CD3D,UBE4A
SE_02_022300125 chr11:118334335-118347753 13418 125 1 345 28 0 14 471 CD3G,CD3D,CD3E,UBE4A
SE_02_022300111 chr11:128462481-128485640 23159 111 1 628 6 1 158 280 ETS1
SE_02_022300265 chr11:17272485-17281458 8973 265 1 216 30 0 21 251 NUCB2
SE_02_022300190 chr11:32401590-32427102 25512 190 2 716 68 4 127 125 WT1,WT1-AS
SE_02_022300157 chr11:65495673-65502414 6741 157 1 266 8 1 9 565 MALAT1,SCYL1
SE_02_022300191 chr11:67400260-67414285 14025 191 1 368 33 1 100 1580 PPP1CA,TBC1D10C,CLCF1,CABP4,RPS6KB2,PTPRCAP,CORO1B,GPR152,CARNS1,POLD4,RAD9A
SE_02_022300256 chr11:67644478-67692143 47665 256 3 1608 161 4 46 2115 ACY3,ALDH3B2,TBX10,NUDT8,NDUFV1,DOC2GP
SE_02_022300152 chr12:104454945-104475682 20737 152 2 542 21 4 86 248 CHST11
SE_02_022300096 chr12:12006702-12034172 27470 96 2 867 28 4 61 0 BCL2L14
SE_02_022300121 chr12:121796972-121807449 10477 121 1 269 13 0 189 1174 LOC338799,SETD1B,RHOF
SE_02_022300215 chr12:122000980-122025002 24022 215 3 833 87 12 107 358 BCL7A,WDR66
SE_02_022300226 chr12:124601978-124613888 11910 226 1 400 24 5 0 0 NCOR2
SE_02_022300182 chr12:126947350-126975856 28506 182 4 850 1 2 16 18 LOC440117
SE_02_022300103 chr12:129468343-129497060 28717 103 3 872 7 8 40 0 TMEM132D
SE_02_022300084 chr12:129558184-129571300 13116 84 1 418 0 1 30 0 TMEM132D
SE_02_022300195 chr12:55924860-55933451 8591 195 1 174 16 0 76 554 DGKA,WIBG,SILV,RAB5B,CDK2
SE_02_022300104 chr12:6333051-6349407 16356 104 2 497 36 12 88 963 SCNN1A,TNFRSF1A,PLEKHG6,LTBR
SE_02_022300142 chr12:660907-687401 26494 142 2 762 76 6 38 89 NINJ2
SE_02_022300200 chr12:9756078-9798782 42704 200 4 1174 196 6 54 81 CD69,KLRF1,CLECL1
SE_02_022300206 chr12:98490285-98519211 28926 206 3 806 78 2 60 778 TMPO,LOC100128191,LOC121456
SE_02_022300062 chr13:21215752-21257821 42069 62 3 1215 89 7 52 0 SKA3,MRP63
SE_02_022300224 chr13:25869872-25885264 15392 224 1 407 7 1 28 0 ATP8A2,SHISA2
SE_02_022300026 chr13:30339147-30397004 57857 26 6 1621 156 5 73 409 LOC100188949,KATNAL1
SE_02_022300088 chr13:40979771-41020855 41084 88 4 962 86 15 84 82 ELF1,WBP4
SE_02_022300039 chr13:48513893-48546676 32783 39 3 805 71 1 53 452 RCBTB2
SE_02_022300017 chr13:50887921-50918105 30184 17 2 685 73 2 24 382 RNASEH2B,DLEU7
SE_02_022300042 chr14:100056057-100085307 29250 42 2 853 71 0 45 139 EVL
SE_02_022300072 chr14:106181852-106236661 54809 72 7 1778 158 1 0 5699 NCRNA00226
SE_02_022300007 chr14:106703242-106793529 90287 7 3 2594 252 8 0 1411 NCRNA00221
SE_02_022300056 chr14:35283134-35304050 20916 56 2 551 79 2 45 125 PSMA6
SE_02_022300145 chr14:60326468-60351076 24608 145 2 618 46 5 74 34 PPM1A
SE_02_022300189 chr14:61466046-61483681 17635 189 1 546 42 10 38 37 PRKCH
SE_02_022300124 chr14:73738956-73761373 22417 124 2 548 68 1 150 681 C14ORF43,PNMA1
SE_02_022300168 chr14:77030894-77046158 15264 168 1 366 26 6 236 0 C14ORF4
SE_02_022300022 chr14:80954135-80990316 36181 22 2 1004 114 10 36 225 TSHR,C14ORF145
SE_02_022300235 chr14:91226580-91259277 32697 235 4 902 85 4 108 863 GPR68
SE_02_022300143 chr15:22131432-22164680 33248 143 2 1271 1 1 0 117 OR4N4,OR4N3P
SE_02_022300252 chr15:30623722-30628424 4702 252 1 111 10 0 0 357 ARHGAP11B
SE_02_022300261 chr15:32612962-32617815 4853 261 1 129 14 0 20 260 ARHGAP11A,SCG5
SE_02_022300262 chr15:38625648-38669021 43373 262 4 1154 59 14 136 0 C15ORF53
SE_02_022300074 chr15:58449857-58488341 38484 74 2 1292 77 9 96 0 LIPC
SE_02_022300219 chr15:59809722-59836830 27108 219 2 832 65 0 104 0 BNIP2
SE_02_022300234 chr15:68810726-68835400 24674 234 3 593 2 0 138 180 MIR548H4,ANP32A,MIR4312,C15ORF28
SE_02_022300153 chr15:78033307-78073528 40221 153 3 1019 131 3 70 166 TBC1D2B,SH2D7,LOC91450
SE_02_022300097 chr15:86039448-86087230 47782 97 3 1694 9 1 161 0 AGBL1
SE_02_022300066 chr15:98942874-98960870 17996 66 1 726 61 2 78 786 IGF1R,PGPEP1L
SE_02_022300083 chr16:54047868-54064799 16931 83 1 415 14 7 292 0 FTO,IRX3
SE_02_022300081 chr16:88788981-88806278 17297 81 2 682 71 1 18 669 CDT1,FAM38A,APRT
SE_02_022300259 chr17:10134312-10173266 38954 259 4 1196 56 2 80 0 GAS7
SE_02_022300141 chr17:34358344-34390935 32591 141 4 1081 42 8 55 344 CCL1,CCL13,CCL8
SE_02_022300123 chr17:35211328-35220725 9397 123 1 247 35 3 0 0 AMAC1,SLFN5
SE_02_022300159 chr17:3737071-3773049 35978 159 3 1196 41 3 5 1820 ITGAE,GSG2,P2RX5
SE_02_022300251 chr17:3958939-3966225 7286 251 1 191 26 2 48 230 ATP2A3,P2RX1
SE_02_022300122 chr17:43358093-43370631 12538 122 2 519 86 3 0 127 LOC100130581,ARL4D
SE_02_022300067 chr17:45218778-45249935 31157 67 2 822 55 1 297 3336 LOC100133991,FMNL1,C17ORF46
SE_02_022300068 chr17:46189519-46215911 26392 68 2 680 115 9 220 390 KIAA1267,LOC644246
SE_02_022300204 chr17:49722052-49751048 28996 204 2 605 12 1 168 162 FAM117A,MYST2,SLC35B1,SPOP
SE_02_022300038 chr17:56204604-56236920 32316 38 2 851 23 0 92 135 ANKFN1
SE_02_022300006 chr17:56268539-56323713 55174 6 3 1620 51 4 174 0 ANKFN1
SE_02_022300089 chr17:68340849-68358310 17461 89 2 516 23 2 44 278 ARSG,SLC16A6
SE_02_022300231 chr17:74735819-74746025 10206 231 1 274 14 0 78 1020 RAB37,CD300LF,NAT9,SLC9A3R1,TMEM104,MIR3615
SE_02_022300166 chr17:75782000-75787897 5897 166 1 160 8 0 59 171 UNK,GALK1,H3F3B
SE_02_022300167 chr17:76021173-76042407 21234 167 1 664 61 1 80 1207 EVPL,SRP68,ACOX1,C17ORF106,CDK3,GALR2,ZACN
SE_02_022300009 chr17:80728618-80792765 64147 9 5 2068 239 8 60 212 RPTOR
SE_02_022300025 chr17:81391446-81457925 66479 25 3 2188 148 2 589 2884 BAHCC1,MIR3186
SE_02_022300169 chr17:81478770-81490369 11599 169 1 345 28 0 33 0 FSCN2,MIR3186,ACTG1
SE_02_022300175 chr17:82877880-82903769 25889 175 2 963 136 2 0 368 TBCD,ZNF750
SE_02_022300057 chr18:13434221-13466548 32327 57 2 1020 39 4 90 475 C18ORF1
SE_02_022300253 chr18:13603134-13630869 27735 253 2 757 12 2 57 439 C18ORF1
SE_02_022300071 chr18:26696232-26719220 22988 71 1 560 53 0 50 67 LOC728606
SE_02_022300245 chr19:3128715-3143757 15042 245 2 555 57 0 8 230 GNA15,NCLN,GNA11,S1PR4
SE_02_022300140 chr19:47727728-47757922 30194 140 2 1047 130 2 115 2057 SNORD23,GLTSCR2,EHD2,TPRX1,SEPW1
SE_02_022300105 chr2:111697649-111739030 41381 105 3 1081 65 2 118 0 ANAPC1
SE_02_022300046 chr2:128709243-128737988 28745 46 3 880 8 4 0 0 HS6ST1
SE_02_022300197 chr2:135817195-135831729 14534 197 1 409 45 4 29 615 LCT,MCM6
SE_02_022300258 chr2:165052813-165072142 19329 258 2 477 20 1 26 0 SLC38A11,SCN3A
SE_02_022300063 chr2:181298525-181315510 16985 63 2 367 32 1 69 44 ITGA4
SE_02_022300045 chr2:181393259-181449158 55899 45 5 1532 29 5 93 137 ITGA4
SE_02_022300146 chr2:213225655-213251448 25793 146 4 698 29 4 97 0 SPAG16
SE_02_022300255 chr2:226968226-226986335 18109 255 1 454 31 13 63 58 RHBDD1
SE_02_022300138 chr2:231610945-231628812 17867 138 3 516 40 2 52 0 C2ORF57
SE_02_022300108 chr2:234134559-234166812 32253 108 3 961 62 1 47 0 SPP2
SE_02_022300131 chr2:234243271-234303156 59885 131 6 1757 64 5 53 0 SPP2
SE_02_022300019 chr2:234418980-234466979 47999 19 6 1593 40 2 25 243 ARL4C
SE_02_022300013 chr2:239543475-239604781 61306 13 4 2380 17 7 53 768 HDAC4
SE_02_022300239 chr2:241857359-241888312 30953 239 3 0 122 0 0 844 PDCD1,C2ORF85,NEU4
SE_02_022300044 chr2:42922569-42966366 43797 44 3 1556 89 4 210 0 HAAO
SE_02_022300133 chr2:43045594-43062523 16929 133 1 614 16 3 54 0 ZFP36L2
SE_02_022300015 chr2:43104069-43177103 73034 15 6 2667 120 7 157 0 ZFP36L2
SE_02_022300126 chr2:59882302-59913708 31406 126 3 939 4 10 383 21 BCL11A
SE_02_022300035 chr2:60089684-60108155 18471 35 1 531 2 9 154 0 BCL11A
SE_02_022300221 chr2:62175519-62191650 16131 221 1 412 19 1 26 0 B3GNT2
SE_02_022300091 chr2:65381492-65423111 41619 91 5 1054 75 14 94 0 SPRED2
SE_02_022300171 chr2:70084229-70105250 21021 171 3 532 40 0 142 686 LOC400960,PCBP1,LOC100133985
SE_02_022300021 chr2:95020509-95079975 59466 21 3 1476 68 4 98 566 MAL,MRPS5
SE_02_022300086 chr20:13668578-13697575 28997 86 2 778 31 0 35 0 TASP1
SE_02_022300203 chr20:15078671-15124003 45332 203 5 1221 3 13 131 0 MACROD2
SE_02_022300249 chr20:25085908-25093573 7665 249 1 222 23 3 0 0 ACSS1,VSX1
SE_02_022300186 chr20:32530556-32543513 12957 186 1 288 19 0 136 443 LOC149950,C20ORF112
SE_02_022300010 chr20:39222076-39262349 40273 10 2 1091 48 2 137 55 LOC339568
SE_02_022300216 chr20:40878827-40898462 19635 216 2 531 23 2 79 0 TOP1
SE_02_022300117 chr20:40925679-40947587 21908 117 2 609 9 0 83 0 TOP1
SE_02_022300018 chr20:53578014-53654307 76293 18 5 2005 14 2 193 474 ZNF217
SE_02_022300214 chr20:53676575-53709698 33123 214 4 965 12 2 43 0 ZNF217
SE_02_022300161 chr20:56997585-57012122 14537 161 1 473 4 1 0 0 BMP7,RAE1
SE_02_022300238 chr20:60054032-60062133 8101 238 1 270 21 0 16 171 C20ORF197
SE_02_022300154 chr20:60254319-60277029 22710 154 2 650 38 0 90 0 C20ORF197
SE_02_022300101 chr20:62870217-62882201 11984 101 1 405 32 1 51 869 DIDO1,DPH3P1,TCFL5
SE_02_022300061 chr21:34904329-35001242 96913 61 8 2789 15 12 292 0 RUNX1,C21ORF96
SE_02_022300136 chr21:38974321-38993277 18956 136 1 645 51 8 36 0 ETS2
SE_02_022300028 chr21:42399788-42431843 32055 28 2 1108 131 8 63 703 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_022300118 chr22:17759933-17801150 41217 118 3 1372 39 6 68 1263 BID,MIR3198,MICAL3
SE_02_022300211 chr22:23573565-23592418 18853 211 2 656 60 2 0 341 IGLL1,C22ORF43
SE_02_022300220 chr22:28798709-28824931 26222 220 4 637 67 1 51 231 XBP1,CCDC117
SE_02_022300229 chr22:30295099-30313752 18653 229 2 431 38 1 79 367 TBC1D10A,GATSL3,SF3A1,CCDC157,OSM,LIF
SE_02_022300165 chr22:42517357-42559135 41778 165 3 1347 164 0 31 946 SERHL2,RRP7A,SERHL,RRP7B
SE_02_022300180 chr22:48095084-48102607 7523 180 1 270 0 1 2 0 MIR3201
SE_02_022300094 chr3:106815792-106831107 15315 94 2 447 7 0 58 0 LOC100302640
SE_02_022300080 chr3:108116825-108136283 19458 80 1 545 44 1 133 0 CD47
SE_02_022300208 chr3:136191081-136199029 7948 208 1 259 9 0 59 300 MSL2
SE_02_022300050 chr3:14874147-14908898 34751 50 2 1102 71 2 42 701 FGD5,NR2C2
SE_02_022300001 chr3:17894147-18027871 133724 1 6 3469 17 2 729 160 TBC1D5
SE_02_022300139 chr3:179953191-179976814 23623 139 2 671 78 1 106 99 PEX5L
SE_02_022300164 chr3:30628084-30668905 40821 164 3 1145 53 7 77 104 TGFBR2
SE_02_022300020 chr3:35632842-35673128 40286 20 3 1037 45 4 146 357 ARPP21
SE_02_022300233 chr3:43011464-43026950 15486 233 1 432 40 0 54 0 FAM198A
SE_02_022300112 chr3:46535607-46560128 24521 112 2 690 110 9 8 371 LRRC2,RTP3,TDGF1
SE_02_022300266 chr3:56781351-56816625 35274 266 3 842 49 2 169 157 ARHGEF3
SE_02_022300250 chr3:72844980-72864294 19314 250 2 545 32 0 31 111 SHQ1,GXYLT2
SE_02_022300034 chr4:10089277-10126864 37587 34 2 1976 237 57 57 1402 WDR1,SLC2A9,MIR3138
SE_02_022300150 chr4:108026189-108055286 29097 150 2 708 74 2 53 430 HADH,LEF1
SE_02_022300031 chr4:118157996-118185139 27143 31 2 715 57 0 17 0 NDST3,SNHG8
SE_02_022300236 chr4:133130863-133149063 18200 236 3 430 25 1 115 240 PCDH10
SE_02_022300148 chr4:15752768-15780725 27957 148 3 809 87 0 16 160 CD38,BST1
SE_02_022300188 chr4:177305671-177314730 9059 188 1 277 7 0 34 128 NEIL3
SE_02_022300110 chr4:186584340-186607441 23101 110 2 777 13 4 103 915 FAT1,MTNR1A
SE_02_022300036 chr4:40183045-40208130 25085 36 2 752 54 4 53 106 RHOH
SE_02_022300016 chr4:40282747-40328963 46216 16 5 1332 15 6 99 282 CHRNA9
SE_02_022300144 chr4:6176906-6191957 15051 144 1 444 16 4 15 0 JAKMIP1
SE_02_022300199 chr4:86958310-86983407 25097 199 3 685 54 4 53 0 AFF1
SE_02_022300227 chr5:100887043-100906618 19575 227 2 444 19 3 102 141 ST8SIA4
SE_02_022300119 chr5:111737919-111781022 43103 119 3 1163 47 9 190 568 C5ORF13
SE_02_022300115 chr5:1307972-1324383 16411 115 1 604 32 10 16 723 CLPTM1L,TERT
SE_02_022300160 chr5:132672178-132695416 23238 160 1 618 64 5 82 479 KIF3A,IL4,IL13
SE_02_022300033 chr5:134037552-134074287 36735 33 2 1040 71 1 55 0 VDAC1,TCF7
SE_02_022300095 chr5:139382833-139394350 11517 95 1 302 13 0 81 1247 SLC23A1,MZB1,LOC389333,SPATA24,DNAJC18,PAIP2
SE_02_022300244 chr5:141601284-141620342 19058 244 1 510 40 0 128 183 DIAPH1,RELL2,FCHSD1,HDAC3
SE_02_022300237 chr5:151195529-151216849 21320 237 2 569 57 5 3 247 CCDC69,GM2A,ANXA6
SE_02_022300098 chr5:176527095-176544742 17647 98 2 559 30 2 151 1857 CDHR2,RNF44
SE_02_022300012 chr5:4521886-4564084 42198 12 4 1224 2 0 52 0 LOC340094,KIAA0947
SE_02_022300060 chr5:80169188-80214198 45010 60 3 1437 113 9 57 285 SERINC5
SE_02_022300047 chr5:955068-1000593 45525 47 3 1422 125 4 49 413 NKD2
SE_02_022300004 chr6:135273372-135353097 79725 4 4 2042 116 4 135 455 AHI1,MYB
SE_02_022300163 chr6:14306285-14355998 49713 163 4 1315 19 4 199 0 CD83
SE_02_022300260 chr6:149029486-149078358 48872 260 5 1310 91 8 162 395 UST,TAB2
SE_02_022300193 chr6:21947355-21976580 29225 193 2 824 2 1 139 0 FLJ22536,LOC729177
SE_02_022300147 chr6:22005884-22039176 33292 147 3 991 7 9 142 54 FLJ22536,LOC729177
SE_02_022300011 chr6:26018987-26061987 43000 11 1 1428 119 26 129 904 HIST1H2BB,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H3A,HIST1H3C,HIST1H4A,HIST1H1C,HIST1H1A,HFE,HIST1H1T,HIST1H4C
SE_02_022300170 chr6:26154411-26176516 22105 170 3 698 40 8 15 361 HIST1H2BD,HIST1H1E,HIST1H2BG,HIST1H4D,HIST1H2AC,HIST1H3E,HIST1H2BE,HIST1H3D,HIST1H2BC,HIST1H4E,HIST1H2BF,HIST1H2AE,HIST1H1T,HIST1H2AD
SE_02_022300054 chr6:27805033-27826404 21371 54 1 652 58 2 93 805 HIST1H4J,HIST1H2AI,HIST1H2BM,HIST1H2BL,HIST1H3H,HIST1H2AJ,HIST1H2AL,HIST1H3I,HIST1H4K,HIST1H2BN,HIST1H4L,HIST1H2AK,HIST1H1B
SE_02_022300078 chr6:27828240-27841078 12838 78 1 343 29 4 62 341 HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H3H,HIST1H2AL,HIST1H3I,HIST1H2BM,HIST1H2AJ,HIST1H2AI,HIST1H4L,HIST1H3J,HIST1H2BL,HIST1H4J,HIST1H1B
SE_02_022300264 chr6:2817004-2825258 8254 264 1 224 21 0 10 0 SERPINB1
SE_02_022300254 chr6:30598177-30619294 21117 254 2 571 55 6 147 1636 PPP1R10,MRPS18B,ABCF1,ATAT1,PRR3,MIR877,GNL1,C6ORF136
SE_02_022300184 chr6:30710638-30723870 13232 184 2 337 47 5 113 1208 MDC1,TUBB,NRM,KIAA1949,IER3,DHX16,FLOT1
SE_02_022300082 chr6:31733337-31742147 8810 82 1 184 22 2 74 638 CLIC1,MSH5,BAT5,C6ORF26,LY6G6C,DDAH2,C6ORF25,LY6G6D,LY6G6F,LY6G6E,C6ORF27
SE_02_022300187 chr6:32966248-32975007 8759 187 1 341 48 8 167 994 BRD2,HLA-DMA,HLA-DOA,HLA-DMB
SE_02_022300246 chr6:33899726-33916522 16796 246 2 522 47 1 30 2702 MIR1275,LEMD2
SE_02_022300075 chr6:35715214-35733996 18782 75 2 496 41 2 140 785 FKBP5,LOC285847,C6ORF126,C6ORF81,C6ORF127
SE_02_022300058 chr6:36872940-36926457 53517 58 5 1441 181 8 77 1181 C6ORF89,PPIL1,PI16,CPNE5
SE_02_022300172 chr6:41933626-41943399 9773 172 1 207 17 4 0 969 CCND3,BYSL,MED20,USP49
SE_02_022300248 chr6:42901075-42933261 32186 248 3 905 102 3 51 1003 CNPY3,PTCRA,GNMT,PEX6,RPL7L1,C6ORF226
SE_02_022300079 chr6:53289870-53317539 27669 79 2 730 94 1 24 171 ELOVL5
SE_02_022300181 chr6:53346144-53364233 18089 181 2 573 53 1 43 318 ELOVL5
SE_02_022300037 chr6:5692251-5722697 30446 37 2 880 5 2 34 0 FARS2,NRN1
SE_02_022300209 chr6:6327757-6353909 26152 209 2 786 51 19 47 167 LY86-AS1,F13A1
SE_02_022300218 chr7:101738664-101756827 18163 218 2 473 13 0 36 0 CUX1
SE_02_022300135 chr7:105009176-105017425 8249 135 1 239 7 0 101 724 MLL5,LOC100216545
SE_02_022300185 chr7:105294968-105311896 16928 185 1 498 31 4 10 98 SRPK2
SE_02_022300055 chr7:106056408-106077889 21481 55 2 630 50 2 38 0 SYPL1
SE_02_022300065 chr7:133476172-133494816 18644 65 2 441 16 0 70 166 EXOC4
SE_02_022300002 chr7:142785989-142816046 30057 2 1 617 109 3 88 909 TRY6,PRSS1,PRSS2,EPHB6
SE_02_022300008 chr7:150624486-150679183 54697 8 5 1589 241 6 13 876 GIMAP6,GIMAP2,GIMAP1
SE_02_022300116 chr7:150731578-150749488 17910 116 1 573 75 1 20 413 GIMAP5,GIMAP2,GIMAP1,LOC100128542
SE_02_022300205 chr7:44972196-44988964 16768 205 1 483 61 0 47 1585 MYO1G,C7ORF40,SNORA9,CCM2
SE_02_022300225 chr7:44989757-45002546 12789 225 1 338 36 0 40 305 CCM2,C7ORF40,SNORA9,MYO1G
SE_02_022300109 chr7:50302857-50331035 28178 109 2 755 24 5 161 323 IKZF1
SE_02_022300070 chr7_KI270803v1_alt:361945-394176 32231 70 3 0 14 8 36 610 MTRNR2L6,LOC730441
SE_02_022300210 chr8:102884199-102905834 21635 210 2 590 49 3 51 0 AZIN1
SE_02_022300201 chr8:103334573-103374412 39839 201 3 1084 187 6 77 272 CTHRC1,FZD6,SLC25A32,DCAF13
SE_02_022300137 chr8:129050842-129090137 39295 137 3 1044 2 3 116 0 LOC728724
SE_02_022300003 chr8:129159414-129207832 48418 3 2 1418 0 4 168 0 LOC728724
SE_02_022300192 chr8:129409617-129425619 16002 192 1 448 9 0 62 0 LOC728724
SE_02_022300247 chr8:141237032-141247291 10259 247 1 374 37 1 16 0 SLC45A4
SE_02_022300212 chr8:142195543-142206302 10759 212 1 379 12 0 9 126 NCRNA00051
SE_02_022300230 chr8:1943807-1956117 12310 230 1 512 35 2 11 195 ARHGEF10,KBTBD11
SE_02_022300149 chr8:20218145-20245910 27765 149 3 918 20 3 39 367 ATP6V1B2,SLC18A1,LZTS1
SE_02_022300128 chr8:28183359-28204610 21251 128 2 609 56 4 29 237 ELP3
SE_02_022300092 chr8:58795168-58810404 15236 92 1 441 16 4 166 247 TOX,NSMAF
SE_02_022300093 chr8:59104203-59121098 16895 93 2 396 11 0 237 145 TOX
SE_02_022300059 chr8:65929071-65957626 28555 59 2 753 66 4 74 0 DNAJC5B
SE_02_022300029 chr9:109410583-109432047 21464 29 2 608 5 1 54 344 PTPN3
SE_02_022300100 chr9:114369377-114390631 21254 100 2 633 40 0 95 890 AKNA,ORM2,ORM1
SE_02_022300120 chr9:120873567-120906548 32981 120 3 816 113 7 0 952 PHF19,TRAF1,PSMD5,LOC253039
SE_02_022300099 chr9:121729772-121751788 22016 99 1 601 17 0 41 108 DAB2IP
SE_02_022300053 chr9:129883223-129898952 15729 53 1 427 69 1 32 1001 FNBP1,USP20,C9ORF78
SE_02_022300129 chr9:136522005-136536193 14188 129 1 507 22 0 70 372 NOTCH1,C9ORF163,SEC16A
SE_02_022300183 chr9:71886183-71912867 26684 183 3 692 16 0 71 343 C9ORF85,FAM108B1
SE_02_022300069 chr9:77899303-77918806 19503 69 1 487 25 0 22 0 GNAQ
SE_02_022300151 chr9:89473877-89510167 36290 151 3 1103 97 5 75 218 SEMA4D
SE_02_022300178 chr9:97968722-97987303 18581 178 2 473 34 2 0 216 ANP32B,C9ORF156,HEMGN
SE_02_022300077 chrX:12946446-12983330 36884 77 2 764 47 1 0 283 TMSL3,TMSB4X,TLR8,LOC349408
SE_02_022300132 chrX:129730924-129783534 52610 132 6 1223 67 1 263 2235 SASH3,XPNPEP2
SE_02_022300130 chrX:13074025-13094044 20019 130 2 357 19 0 23 0 FAM9C,TMSB4X
SE_02_022300027 chrX:136607031-136698290 91259 27 6 1618 92 1 471 1451 CD40LG,ARHGEF6
SE_02_022300241 chrX:153921253-153932889 11636 241 1 249 19 1 68 1032 NAA10,ARHGAP4,AVPR2,HCFC1,MIR3202-1,TMEM187,L1CAM,RENBP,MIR3202-2
SE_02_022300134 chrX:2689794-2720273 30479 134 2 1086 70 0 0 319 CD99,XG,XGPY2
SE_02_022300076 chrX:65984904-66020223 35319 76 2 840 34 0 73 340 MIR223,VSIG4
SE_02_022300228 chrX:79254984-79272668 17684 228 2 424 32 0 20 0 GPR174

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM2037790
Input ID: Name:GSM2311761
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb