SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000130520
Gene: LSM4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:18306236-18323112 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_001400030 chr19:18273404-18342100 Sample_00_0014 Heart left ventricle heart-left-ventricle 30 9 2020 181 13 143 1737 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_02_003200093 chr19:18273619-18342971 Sample_02_0032 Pancreas pancreatic-islets-M 93 13 2032 182 13 144 1798 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_002000019 chr19:18273721-18342089 Sample_00_0020 Large intestine large-intestine_108d 19 10 2007 179 13 143 1737 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_02_003600118 chr19:18273938-18346623 Sample_02_0036 Embryo H7 118 16 2141 198 15 155 1818 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_003600012 chr19:18273958-18342072 Sample_00_0036 Small intestine small-intestine_108days 12 12 2000 178 13 143 1737 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_02_003300396 chr19:18274054-18342097 Sample_02_0033 Pancreas pancreatic-islets-F 396 11 1997 177 13 143 1737 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_001100046 chr19:18274067-18342011 Sample_00_0011 Esophagus esophagus 46 13 1997 177 13 143 1737 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_004000003 chr19:18274108-18341741 Sample_00_0040 Spleen spleen_30y 3 14 1988 176 13 143 1737 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_002100053 chr19:18274109-18342009 Sample_00_0021 Lung lung_3y 53 10 1995 177 13 143 1737 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_003500006 chr19:18274131-18346609 Sample_00_0035 Sigmoid colon sigmoid-colon 6 19 2131 197 15 155 1818 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_004300021 chr19:18274170-18345157 Sample_00_0043 Stomach stomach_96d 21 12 2083 189 15 155 1818 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_003400036 chr19:18274184-18341686 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 36 12 1983 175 13 143 1737 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_002200015 chr19:18274222-18341877 Sample_00_0022 Lung lung_30y 15 16 1984 175 13 143 1736 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_004100049 chr19:18274227-18341925 Sample_00_0041 Stomach stomach_3y 49 14 1985 175 13 143 1734 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_002500043 chr19:18274336-18341398 Sample_00_0025 Muscle of leg muscle-of-leg 43 15 1978 175 13 143 1707 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_00_003900008 chr19:18274345-18341811 Sample_00_0039 Spleen spleen_3y 8 10 1981 175 13 143 1704 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_02_003800079 chr19:18274436-18345262 Sample_02_0038 Embryo DE 79 13 2078 188 15 154 1758 KIAA1683,MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,MIR3189
SE_02_004800032 chr19:18274539-18345021 Sample_02_0048 Embryo endodermal CyT49_HE 32 15 2069 188 15 154 1734 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_008700221 chr19:18277451-18331319 Sample_02_0087 Pancreas MiaPaca2 221 1 1599 139 10 133 1493 MIR3188,JUND,LSM4,PDE4C,LOC729966,KIAA1683,PGPEP1
SE_02_013200064 chr19:18277819-18342602 Sample_02_0132 Lung 1015_CL 64 9 1866 159 13 139 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_011400138 chr19:18277876-18341374 Sample_02_0114 Mammary gland CAL51 138 15 1841 156 13 138 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_013100064 chr19:18278015-18342027 Sample_02_0131 Lung 1015_PT 64 10 1845 158 13 138 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_00_003100029 chr19:18278352-18343875 Sample_00_0031 Placenta placenta 29 10 1881 159 12 139 1706 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189,IFI30,ISYNA1,LRRC25,LS4,RAB3A,SSBP4
SE_00_002600081 chr19:18278528-18329350 Sample_00_0026 Muscle of trunk muscle-of-trunk 81 7 1493 131 8 133 1493 MIR3188,JUND,LSM4,PDE4C,LOC729966,KIAA1683,PGPEP1
SE_02_011500119 chr19:18278617-18341637 Sample_02_0115 Mammary gland MCF-7 119 10 1812 153 12 138 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_01_004300262 chr19:18278632-18342228 Sample_01_0043 Blood KOPT-K1 262 7 1821 154 12 138 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_002200046 chr19:18278652-18341390 Sample_02_0022 Blood CD8donorA 46 21 1807 153 12 138 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_00_004500108 chr19:18278830-18342019 Sample_00_0045 Thymus thymus 108 10 1809 153 12 138 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_034800314 chr19:18278900-18342019 Sample_02_0348 Peripheral blood CUTLL1_wild-type 314 7 1808 153 12 138 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_003900037 chr19:18279008-18329533 Sample_02_0039 Embryo AFG 37 9 1476 129 8 133 1493 MIR3188,JUND,LSM4,PDE4C,LOC729966,KIAA1683,PGPEP1
SE_02_004900051 chr19:18279018-18341706 Sample_02_0049 Embryo endodermal CyT49_GTtoH 51 8 1797 152 12 138 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_034900245 chr19:18279201-18341995 Sample_02_0349 Peripheral blood CUTLL1_dimer-mutant 245 7 1794 152 12 138 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_004500037 chr19:18279500-18341984 Sample_02_0045 Embryo endodermal CyT49_ES_D7 37 10 1787 151 12 138 1625 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_004400031 chr19:18279526-18329353 Sample_02_0044 Embryo endodermal CyT49_ES_D5 31 10 1457 127 8 133 1493 MIR3188,JUND,LSM4,PDE4C,LOC729966,KIAA1683,PGPEP1
SE_02_004300053 chr19:18279527-18340485 Sample_02_0043 Embryo endodermal CyT49_ES_D2 53 11 1744 146 12 133 1507 MIR3188,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189,PGPEP1
SE_00_002400020 chr19:18279617-18341975 Sample_00_0024 Embryo mesendoderm 20 9 1785 151 12 136 1613 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_004600042 chr19:18279644-18341988 Sample_02_0046 Embryo endodermal CyT49_ES_D10 42 11 1786 151 12 136 1600 MIR3188,PGPEP1,JUND,LSM4,PDE4C,LOC729966,GDF15,KIAA1683,MIR3189
SE_02_062200176 chr19:18284048-18321487 Sample_02_0622 Blood EOL1_Naive 176 25 1139 95 4 41 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683,C19orf60,ISYNA1,KXD1,RAB3A,GDF15,PIK3R2,ELL,SSBP4,MPV17L2,LRRC25
SE_02_042300285 chr19:18284422-18329418 Sample_02_0423 Skin A375 285 14 1341 111 7 41 786 LSM4,JUND,PDE4C,LOC729966,MIR3188,KIAA1683,PGPEP1
SE_02_134500346 chr19:18284522-18321120 Sample_02_1345 Leukophereses leukophereses_p358 346 13 1124 92 4 41 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_078400261 chr19:18284543-18328999 Sample_02_0784 Blood OSU-CLL 261 7 1331 111 7 41 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_104200130 chr19:18284629-18321139 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 130 16 1122 92 4 41 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_078300458 chr19:18284678-18329320 Sample_02_0783 Blood MEC2 458 9 1336 110 7 41 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_114500273 chr19:18284733-18330631 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 273 31 1363 109 8 41 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_104400074 chr19:18284749-18321074 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 74 13 1118 89 4 41 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_00_005800181 chr19:18284751-18320871 Sample_00_0058 Stomach stomach 34y 181 7 1113 89 4 41 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_112600030 chr19:18284775-18329026 Sample_02_1126 Adipose visceral adipose_CTL_H425 30 17 1325 108 7 41 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683,ISYNA1,SSBP4
SE_02_091400307 chr19:18284827-18329314 Sample_02_0914 Heart left ventricle_DCM_LV1342 307 10 1330 108 7 41 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_103900059 chr19:18284833-18320523 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 59 22 1100 89 4 41 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_074200117 chr19:18284887-18328871 Sample_02_0742 Embryo ESCs_day0 117 14 1320 108 7 41 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_082000090 chr19:18284929-18323978 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 90 6 1203 99 6 40 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_082700078 chr19:18285034-18321256 Sample_02_0827 Stomach normal gastric 78 13 1111 88 4 37 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_074400056 chr19:18286030-18333306 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 56 13 1387 105 8 37 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_082200173 chr19:18286136-18321698 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 173 7 1080 84 4 37 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_055200334 chr19:18286161-18321589 Sample_02_0552 Other SYO1 shCt 334 20 1078 84 4 37 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_055900071 chr19:18286236-18329505 Sample_02_0559 iPSCs FX52 iPSCs dC-T 71 6 1283 101 7 37 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_104601025 chr19:18286257-18320621 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1025 17 1054 81 4 37 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_116100036 chr19:18287446-18329325 Sample_02_1161 Embryo H1_shZNF587 36 10 1246 95 7 37 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_01_010500416 chr19:18287834-18334493 Sample_01_0105 Thyroid gland thyroid gland_54y 416 12 1372 97 8 37 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683,ISYNA1,RAB3A,GDF15,PIK3R2,SSBP4,MPV17L2,LRRC25
SE_02_139300102 chr19:18288744-18330033 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 102 7 1233 86 7 34 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_121700299 chr19:18289947-18328893 Sample_02_1217 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1_Asparagine deprivation 299 10 1177 84 7 34 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_082300163 chr19:18290036-18319889 Sample_02_0823 Haematopoietic and lymphoid tissue SET-2_insR_GSK-LSD1 163 6 938 64 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_054600091 chr19:18290145-18319077 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 91 3 906 62 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_133700084 chr19:18290176-18318999 Sample_02_1337 Lung NCI-H1299-wtSMARCA4_Dox_SAHA 84 6 904 62 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_048800044 chr19:18290208-18318690 Sample_02_0488 Bone marrow HSCe_74y_CD34+,CD38-,Lineage- 44 8 896 61 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_124600234 chr19:18290940-18329225 Sample_02_1246 Brain LAN5_ATRA 234 9 1160 82 7 34 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_106400638 chr19:18290977-18319045 Sample_02_1064 Brain CLB-GA-Dinaciclib_8h 638 5 885 60 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_106300411 chr19:18290995-18321694 Sample_02_1063 Brain CLB-GA-control 411 5 960 65 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_142300086 chr19:18291006-18320084 Sample_02_1423 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_1h 86 8 918 62 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_054700220 chr19:18291091-18318939 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 220 5 880 58 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_155800288 chr19:18291132-18318725 Sample_02_1558 Gastrointestinal Stromal GIST-7_PDGFRA e18 288 5 871 58 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_124400081 chr19:18291196-18318544 Sample_02_1244 Brain KCNR_ATRA 81 10 867 58 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_142100026 chr19:18291199-18319017 Sample_02_1421 Brain NHA 26 5 877 59 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_150000453 chr19:18291227-18329204 Sample_02_1500 Brain KELLY_untreat 453 6 1150 81 7 34 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_157400204 chr19:18291288-18318507 Sample_02_1574 Blood JURKAT 204 4 862 57 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_049301006 chr19:18291305-18329226 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 1006 6 1148 80 7 34 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_151800235 chr19:18291325-18319786 Sample_02_1518 Umbilical vein HUVEC_Scr 235 10 899 59 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683,ISYNA1,RAB3A,PIK3R2,SSBP4,MPV17L2
SE_02_049500550 chr19:18291401-18329157 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 550 5 1144 78 7 34 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_049400889 chr19:18291410-18329256 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 889 7 1146 78 7 34 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_101900075 chr19:18291439-18318477 Sample_02_1019 Umbilical cord HUDEP2_Day 75 3 857 55 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_062000441 chr19:18291573-18320999 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 441 8 928 59 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683,GDF15
SE_02_048600082 chr19:18291576-18318863 Sample_02_0486 Bone marrow HSCe_66y_CD34+,CD38-,Lineage- 82 4 861 55 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_143500218 chr19:18291676-18344393 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 218 10 1540 110 12 40 999 PGPEP1,LSM4,PDE4C,MIR3189,JUND,LOC729966,MIR3188,GDF15,KIAA1683
SE_02_001400240 chr19:18291752-18319078 Sample_02_0014 Liver HepG2_shBRG1 240 4 862 56 4 34 657 LSM4,JUND,PDE4C,LOC729966,MIR3188,KIAA1683,PGPEP1
SE_02_151900447 chr19:18291842-18329357 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 447 10 1137 78 7 34 786 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683,MPV17L2
SE_02_158600512 chr19:18291877-18318990 Sample_02_1586 Blood SupB15 ACY1035 512 6 855 56 4 34 657 LSM4,PDE4C,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_102900896 chr19:18298610-18307063 Sample_02_1029 Colon HCT116 896 1 271 20 2 6 197 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_104900292 chr19:18298828-18314801 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 292 1 545 32 2 17 586 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_089801308 chr19:18299724-18306184 Sample_02_0898 Heart left ventricle_LV1356 1308 1 192 14 2 1 28 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_089201440 chr19:18299981-18308356 Sample_02_0892 Heart left ventricle_LV1215 1440 1 269 16 2 2 335 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_01_009300946 chr19:18300004-18309670 Sample_01_0093 Aorta ascending aorta 946 1 310 16 2 2 388 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_01_008501396 chr19:18300134-18308968 Sample_01_0085 Stomach stomach 1396 1 277 16 2 2 335 LSM4,JUND,LOC729966,MIR3188,KIAA1683,PGPEP1
SE_01_008801239 chr19:18300294-18309491 Sample_01_0088 Tibial nerve tibial-nerve 1239 1 297 16 2 2 335 LSM4,JUND,LOC729966,MIR3188,KIAA1683,PGPEP1
SE_02_090401074 chr19:18300338-18308142 Sample_02_0904 Heart left ventricle_DCM_LV1028 1074 1 253 15 2 2 335 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_089601194 chr19:18300414-18306221 Sample_02_0896 Heart left ventricle_LV1294 1194 1 175 12 2 1 31 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_04_000101179 chr19:18300498-18306445 Sample_04_0001 Blood heat shocked K562 1179 1 185 13 2 1 67 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_157300676 chr19:18300552-18306079 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 676 1 167 10 0 1 4 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_152000551 chr19:18300917-18319351 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 551 5 609 36 4 22 657 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683,PDE4C,MPV17L2
SE_02_093001175 chr19:18301364-18306015 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1175 1 148 8 0 0 0 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_083501017 chr19:18301591-18306194 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 1017 1 148 10 2 0 30 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_046000735 chr19:18301616-18306093 Sample_02_0460 Blood ME-1_I-10-49_6h 735 1 140 8 0 0 9 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_083600644 chr19:18301677-18309587 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 644 1 272 14 2 1 367 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_104700890 chr19:18301718-18307191 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 890 1 178 12 2 0 219 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_083400735 chr19:18301825-18309816 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 735 1 272 14 2 9 420 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_110500772 chr19:18301858-18310660 Sample_02_1105 Brain NBL-S 772 1 310 15 2 9 477 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_083301059 chr19:18301922-18306311 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 1059 1 144 10 2 0 42 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_02_155600650 chr19:18302207-18307774 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 650 1 197 13 2 1 335 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_01_008401251 chr19:18302700-18311512 Sample_01_0084 Spleen spleen 1251 1 313 14 2 9 477 LSM4,JUND,LOC729966,MIR3188,KIAA1683,PGPEP1
SE_02_118501012 chr19:18302749-18306475 Sample_02_1185 Brain GBM14 1012 1 123 9 2 0 79 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_01_007900779 chr19:18302755-18314101 Sample_01_0079 Peyers patch Peyers-patch 779 1 409 22 2 16 586 LSM4,JUND,LOC729966,MIR3188,KIAA1683,PGPEP1
SE_00_005501262 chr19:18302816-18306249 Sample_00_0055 Spleen spleen 34y 1262 1 112 8 2 0 33 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683,PDE4C,IL12RB1,GDF15,MAST3,ARRDC2,MPV17L2,LRRC25
SE_02_061400887 chr19:18302827-18308874 Sample_02_0614 Liposarcoma MLPS_T2 887 1 205 12 2 1 335 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_01_010600459 chr19:18303158-18306100 Sample_01_0106 Adrenal gland adrenal gland 54y 459 1 89 6 0 0 11 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_00_004700441 chr19:18303171-18307815 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 441 1 161 11 2 1 335 LSM4,JUND,PGPEP1,LOC729966,MIR3188,KIAA1683
SE_00_004900776 chr19:18309066-18313050 Sample_00_0049 Small intestine small intestine 30y 776 1 165 10 0 15 251 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_122900857 chr19:18311312-18323112 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 857 1 358 29 4 12 251 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_143400789 chr19:18313335-18324470 Sample_02_1434 Trophoblast trophoblast stem cells 789 1 320 23 4 5 200 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_083600323 chr19:18313826-18324597 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 323 1 308 24 4 5 200 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_057600535 chr19:18314054-18323152 Sample_02_0576 Blood HEL_sgLKB1e2 535 1 259 21 4 5 148 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_083400387 chr19:18314623-18324636 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 387 1 289 24 4 5 200 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_110500949 chr19:18314905-18324609 Sample_02_1105 Brain NBL-S 949 1 281 23 4 5 200 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_083500400 chr19:18314955-18324607 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 400 1 277 22 4 5 200 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_111200973 chr19:18314999-18324482 Sample_02_1112 T lymphocyte THP-6 T-ALL 973 1 271 21 4 5 200 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_058000516 chr19:18315007-18323163 Sample_02_0580 Blood HEL_sgSIK3e4 516 1 235 19 4 5 152 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_057900523 chr19:18315016-18323140 Sample_02_0579 Blood HEL_sgNeg2 523 1 234 19 4 5 146 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_083300304 chr19:18315107-18324668 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 304 1 273 22 4 5 200 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_083700375 chr19:18315197-18324668 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 375 1 269 22 4 5 200 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_093000435 chr19:18315564-18323107 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 435 1 216 19 4 5 142 LSM4,MIR3188,JUND,KIAA1683,PGPEP1,PDE4C,GDF15,SSBP4,MPV17L2
SE_02_104901277 chr19:18315591-18321342 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1277 1 156 12 2 5 71 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_092900752 chr19:18316766-18323069 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 752 1 181 17 3 2 62 LSM4,MIR3188,JUND,KIAA1683,PGPEP1,PDE4C,GDF15,SSBP4,MPV17L2
SE_01_007900600 chr19:18317354-18324926 Sample_01_0079 Peyers patch Peyers-patch 600 1 219 19 3 2 129 LSM4,JUND,MIR3188,PGPEP1,KIAA1683
SE_00_004900297 chr19:18317609-18323114 Sample_00_0049 Small intestine small intestine 30y 297 1 158 16 3 2 72 LSM4,MIR3188,JUND,KIAA1683,PGPEP1,PDE4C
SE_02_144000118 chr19:18317931-18334598 Sample_02_1440 Cytotrophoblast Cytotrophoblast 118 4 446 31 5 2 129 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
SE_02_107700264 chr19:18318001-18336597 Sample_02_1077 Mammary gland MCF7_TET2KO-E2 264 5 493 34 5 2 129 LSM4,MIR3189,JUND,PGPEP1,MIR3188,GDF15,KIAA1683
SE_02_062400286 chr19:18318016-18336618 Sample_02_0624 Mammary gland TAMR_VEH 286 4 493 34 5 2 129 LSM4,MIR3189,JUND,PGPEP1,MIR3188,GDF15,KIAA1683
SE_02_139400677 chr19:18320483-18329262 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 677 4 227 19 3 0 129 LSM4,MIR3188,JUND,KIAA1683,PGPEP1
Genomic distribution of SEs associated with LSM4
Genome Browser

The strength of the tissue affected by the gene

Expression of LSM4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)