SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_093000435
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__SynT
Genomic region: chr19:18315564-18323107
Size: 7543
Super-enhancer rank 435
Number of SE elements: 1
ChIP density(Case|Control): 33111.5071|641.155
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LSM4;
ROSE Overlap LSM4;
ROSE Proximal MIR3188; JUND; KIAA1683; PGPEP1;
ROSE Closest LSM4;
Lasso PDE4C; KIAA1683; PGPEP1; GDF15; JUND; LSM4; SSBP4; MPV17L2;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_093000435 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers