SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000075884
Gene: ARHGAP15 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:143091362-143768352 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_075400856 chr2:143034664-143042464 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 856 3 206 16 6 10 77 KYNU,ARHGAP15
SE_02_049300955 chr2:143034919-143042352 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 955 2 197 16 6 7 65 KYNU,ARHGAP15
SE_02_092700122 chr2:143066227-143165818 Sample_02_0927 Peripheral blood neutrophils_US 122 22 2731 94 7 521 79 ARHGAP15
SE_02_153100474 chr2:143066950-143088619 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 474 3 588 16 0 21 0 ARHGAP15
SE_02_153000778 chr2:143066956-143084547 Sample_02_1530 Peripheral blood neutrophils_0BA0X 778 2 479 13 0 19 0 ARHGAP15
SE_02_152900626 chr2:143067129-143088863 Sample_02_1529 Peripheral blood neutrophils_0BC75 626 5 591 15 0 21 0 ARHGAP15
SE_02_090500241 chr2:143090940-143091181 Sample_02_0905 Heart left ventricle_DCM_LV1033 241 1 8 0 0 0 0 ARHGAP15
SE_02_010400101 chr2:143101345-143180460 Sample_02_0104 Blood neutrophils 101 12 2106 88 9 553 79 ARHGAP15
SE_02_087500926 chr2:143109550-143162524 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 926 14 1418 59 6 413 79 ARHGAP15
SE_02_033600324 chr2:143109592-143152175 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 324 5 1190 57 6 125 35 ARHGAP15
SE_02_133000720 chr2:143109649-143161051 Sample_02_1330 Blood AMU-AML1 720 15 1379 59 6 340 79 ARHGAP15
SE_02_149200755 chr2:143109720-143162741 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 755 10 1421 59 6 419 79 ARHGAP15
SE_02_083300641 chr2:143110224-143152149 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 641 12 1175 56 6 125 35 ARHGAP15
SE_02_022100505 chr2:143110237-143153033 Sample_02_0221 Blood CCRF-CEM 505 7 1196 57 6 128 35 ARHGAP15
SE_02_023400142 chr2:143110255-143231052 Sample_02_0234 Tonsil Th17 142 26 3244 214 10 748 152 ARHGAP15
SE_02_143100451 chr2:143110266-143179336 Sample_02_1431 Blood T cell 451 13 1856 79 9 520 79 ARHGAP15
SE_02_057900516 chr2:143110376-143151902 Sample_02_0579 Blood HEL_sgNeg2 516 14 1166 56 6 124 35 ARHGAP15
SE_02_083500851 chr2:143110384-143151642 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 851 10 1159 56 6 123 35 ARHGAP15
SE_02_111900412 chr2:143110385-143162356 Sample_02_1119 Blood KBM7 412 17 1399 59 6 406 79 ARHGAP15
SE_02_058000548 chr2:143110417-143151840 Sample_02_0580 Blood HEL_sgSIK3e4 548 11 1165 56 6 124 35 ARHGAP15
SE_02_061701162 chr2:143110545-143151134 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 1162 8 1138 56 6 123 35 ARHGAP15
SE_02_083400851 chr2:143110547-143159910 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 851 11 1336 59 6 317 79 ARHGAP15
SE_02_103400759 chr2:143110572-143153589 Sample_02_1034 Blood AML cell 759 6 1202 57 6 132 35 ARHGAP15
SE_02_083600832 chr2:143110581-143151812 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 832 10 1157 56 6 124 35 ARHGAP15
SE_02_057600473 chr2:143110728-143160106 Sample_02_0576 Blood HEL_sgLKB1e2 473 10 1334 58 6 322 79 ARHGAP15
SE_02_153100592 chr2:143110749-143165747 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 592 16 1477 61 6 462 79 ARHGAP15
SE_02_099900282 chr2:143110758-143177448 Sample_02_0999 Lymphoma OCI-LY1_966 282 27 1796 77 9 515 79 ARHGAP15
SE_02_099800514 chr2:143111351-143162326 Sample_02_0998 Lymphoma OCI-LY1_DMSO 514 30 1376 57 6 402 79 ARHGAP15
SE_01_002000368 chr2:143120641-143178129 Sample_01_0020 Blood B-cell 368 9 1560 69 9 485 79 ARHGAP15
SE_02_134000346 chr2:143120686-143162880 Sample_02_1340 Blood acute myeloid leukemia 346 16 1151 50 6 387 79 ARHGAP15
SE_02_130300512 chr2:143120856-143161579 Sample_02_1303 Lymphoma RL_tazemetostat 512 18 1103 48 6 356 79 ARHGAP15
SE_02_130400439 chr2:143120918-143162352 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 439 10 1128 48 6 372 79 ARHGAP15
SE_02_142900883 chr2:143120924-143150727 Sample_02_1429 Blood GM12878_WT 883 11 858 44 6 90 35 ARHGAP15
SE_02_002500356 chr2:143121191-143159628 Sample_02_0025 Blood CD19donorA 356 10 1055 48 6 256 79 ARHGAP15
SE_02_146001120 chr2:143124762-143150549 Sample_02_1460 Blood Mutz-3 1120 7 745 41 6 87 35 ARHGAP15
SE_02_152900750 chr2:143124900-143165623 Sample_02_1529 Peripheral blood neutrophils_0BC75 750 12 1101 48 6 424 79 ARHGAP15
SE_02_073500351 chr2:143126089-143160069 Sample_02_0735 Lymphoma PAR_Mantle cell lymphoma tissue_THZ1 351 6 920 43 6 282 79 ARHGAP15
SE_02_072800293 chr2:143126348-143160496 Sample_02_0728 Lymphoma I10_Mantle cell lymphoma tissue_DMSO 293 12 921 42 6 291 79 ARHGAP15
SE_02_073000281 chr2:143127129-143160815 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 281 6 897 39 6 289 79 ARHGAP15
SE_01_005200576 chr2:143127185-143166333 Sample_01_0052 Blood neutrophil 576 6 1045 41 6 425 79 ARHGAP15
SE_02_073100338 chr2:143127264-143160360 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 338 6 883 38 6 283 79 ARHGAP15
SE_02_073400240 chr2:143127325-143160719 Sample_02_0734 Lymphoma PAR_Mantle cell lymphoma tissue_DMSO 240 7 889 37 6 287 79 ARHGAP15
SE_02_153000878 chr2:143127326-143166376 Sample_02_1530 Peripheral blood neutrophils_0BA0X 878 12 1044 41 6 425 79 ARHGAP15
SE_02_073300430 chr2:143127359-143160270 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 430 8 881 37 6 280 79 ARHGAP15
SE_02_073200404 chr2:143127486-143160265 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 404 11 875 37 6 280 79 ARHGAP15
SE_02_023300180 chr2:143127567-143178084 Sample_02_0233 Tonsil Th1 180 14 1345 56 9 472 79 ARHGAP15
SE_02_138801132 chr2:143127594-143141086 Sample_02_1388 Peripheral blood JB6_ALK+ 1132 3 395 27 6 33 35 ARHGAP15
SE_02_023200292 chr2:143127760-143183574 Sample_02_0232 Tonsil ILC3 292 14 1505 65 9 475 79 ARHGAP15
SE_02_023100126 chr2:143127845-143177975 Sample_02_0231 Tonsil ILC1 126 9 1339 56 9 472 79 ARHGAP15
SE_02_010400876 chr2:143236523-143264525 Sample_02_0104 Blood neutrophils 876 5 791 65 0 117 36 ARHGAP15
SE_02_023400633 chr2:143244667-143281998 Sample_02_0234 Tonsil Th17 633 6 1002 62 0 179 36 ARHGAP15
SE_02_023300631 chr2:143244764-143263967 Sample_02_0233 Tonsil Th1 631 6 553 39 0 89 36 ARHGAP15
SE_02_023200715 chr2:143245073-143264837 Sample_02_0232 Tonsil ILC3 715 6 578 44 0 92 36 ARHGAP15
SE_02_023100303 chr2:143245612-143262932 Sample_02_0231 Tonsil ILC1 303 4 506 38 0 88 36 ARHGAP15
SE_02_014800618 chr2:143246671-143263736 Sample_02_0148 Blood CD8_T_cells 618 7 505 38 0 89 36 ARHGAP15
SE_02_045400776 chr2:143246844-143264514 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 776 5 523 41 0 89 36 ARHGAP15
SE_02_068900043 chr2:143308751-143404820 Sample_02_0689 Lung NCI-H446_no infection 43 42 2482 34 11 692 0 ARHGAP15,LOC101928386
SE_02_041100006 chr2:143319276-143555077 Sample_02_0411 Liver TTC549_untreated 6 16 6280 194 17 1650 148 ARHGAP15
SE_02_041200005 chr2:143319534-143555111 Sample_02_0412 Liver TTC549_Doxycycline 5 20 6273 194 17 1650 148 ARHGAP15
SE_02_014000475 chr2:143320421-143351935 Sample_02_0140 Kidney RT242 475 5 854 5 6 109 0 ARHGAP15
SE_02_039400075 chr2:143321215-143365457 Sample_02_0394 Mammary gland T-47D_2 75 7 1171 10 6 329 0 ARHGAP15
SE_02_080900051 chr2:143327553-143371374 Sample_02_0809 Mammary gland T47D Serum 51 6 1141 9 7 371 0 ARHGAP15,KYNU
SE_02_053200085 chr2:143329144-143366352 Sample_02_0532 Mammary gland T47D 85 18 955 8 6 330 0 ARHGAP15,KYNU
SE_02_081000464 chr2:143329150-143365042 Sample_02_0810 Mammary gland T47D noSerum 464 26 919 7 6 329 0 ARHGAP15,KYNU
SE_02_040300166 chr2:143330130-143366420 Sample_02_0403 Mammary gland T-47D_untreat 166 3 927 7 6 330 0 ARHGAP15,KYNU
SE_02_109200424 chr2:143330419-143365870 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 424 8 907 7 6 330 0 ARHGAP15,KYNU
SE_02_109300543 chr2:143330435-143365859 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 543 5 906 7 6 330 0 ARHGAP15,KYNU
SE_02_109000218 chr2:143330466-143366129 Sample_02_1090 Mammary gland T47D_shCtrl_8hr 218 12 913 7 6 330 0 ARHGAP15
SE_02_123400384 chr2:143330851-143365646 Sample_02_1234 Mammary gland T47D_Full 384 17 890 6 6 329 0 ARHGAP15,KYNU
SE_02_108600533 chr2:143331602-143365917 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 533 10 874 6 6 330 0 ARHGAP15,KYNU
SE_02_109100378 chr2:143332006-143364960 Sample_02_1091 Mammary gland T47D_shCtrl_shRING1B_8hr 378 20 835 5 6 329 0 ARHGAP15,KYNU
SE_02_139000074 chr2:143417277-143439496 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 74 3 619 48 1 157 86 ARHGAP15
SE_02_141300323 chr2:143425603-143443169 Sample_02_1413 Muscle RH4_sgBRG1 323 4 511 39 0 168 86 ARHGAP15
SE_01_008800490 chr2:143430614-143497732 Sample_01_0088 Tibial nerve tibial-nerve 490 8 1797 63 1 410 114 ARHGAP15
SE_02_014000009 chr2:143430738-143532585 Sample_02_0140 Kidney RT242 9 10 2710 94 3 732 148 ARHGAP15
SE_02_141300156 chr2:143458089-143500130 Sample_02_1413 Muscle RH4_sgBRG1 156 11 1154 15 1 262 28 ARHGAP15
SE_02_074000943 chr2:143471590-143483924 Sample_02_0740 Muscle RH3 943 5 328 3 1 129 0 ARHGAP15,LOC101928386
SE_00_002500697 chr2:143472476-143490081 Sample_00_0025 Muscle of leg muscle-of-leg 697 4 463 8 1 138 28 ARHGAP15
SE_00_002600591 chr2:143472589-143489434 Sample_00_0026 Muscle of trunk muscle-of-trunk 591 3 446 8 1 131 28 ARHGAP15
SE_00_003800525 chr2:143598788-143624242 Sample_00_0038 Spinal cord spinal-cord_108d 525 4 624 14 5 308 32 ARHGAP15,GTDC1
SE_01_008800752 chr2:143598944-143629990 Sample_01_0088 Tibial nerve tibial-nerve 752 5 756 18 5 331 56 ARHGAP15
SE_02_014000230 chr2:143598993-143624304 Sample_02_0140 Kidney RT242 230 3 613 13 5 309 41 ARHGAP15
SE_02_018300477 chr2:143599840-143617818 Sample_02_0183 Skin SKMEL2 477 3 430 12 4 205 0 ARHGAP15,GTDC1
SE_02_018400284 chr2:143600222-143617893 Sample_02_0184 Skin SKMEL30 284 6 421 12 4 198 0 ARHGAP15,GTDC1
SE_02_018500229 chr2:143600728-143618414 Sample_02_0185 Skin UACC257 229 5 423 12 4 199 0 ARHGAP15,GTDC1
SE_02_035900287 chr2:143601268-143617938 Sample_02_0359 Colon Colo741 287 2 396 12 4 191 0 ARHGAP15,GTDC1
SE_02_001800372 chr2:143601889-143609256 Sample_02_0018 Embryo NEC 372 2 160 4 1 121 0 ARHGAP15,GTDC1
SE_02_018100615 chr2:143602080-143617841 Sample_02_0181 melanoma COLO679 615 5 379 12 4 180 0 ARHGAP15,GTDC1
Genomic distribution of SEs associated with ARHGAP15
Genome Browser

The strength of the tissue affected by the gene

Expression of ARHGAP15

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)