Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_041100105 chr1:149836125-149857694 21569 105 1 182 12 1 109 792 HIST2H2BC,HIST2H3A,HIST2H2AA4,HIST2H2BF,BOLA1,HIST2H4B,HIST2H3D,HIST2H2BE,HIST2H2AB,HIST2H2AC,HIST2H3C,HIST2H2AA3
SE_02_041100149 chr1:150559863-150580813 20950 149 2 553 55 4 87 965 MCL1,ADAMTSL4,MIR4257,ENSA
SE_02_041100167 chr1:154966754-154978876 12122 167 1 309 12 4 129 1103 SHC1,CKS1B,MIR4258,PYGO2,PBXIP1,FLAD1,ZBTB7B,PMVK,LENEP
SE_02_041100177 chr1:156095712-156131108 35396 177 5 843 73 4 251 695 LMNA,ROBLD3,RAB25,SEMA4A,UBQLN4,MEX3A
SE_02_041100141 chr1:156739820-156753683 13863 141 1 353 24 1 128 1206 MRPL24,HDGF,C1ORF66,PRCC,ISG20L2,CRABP2
SE_02_041100187 chr1:157991939-158026206 34267 187 5 859 20 5 152 237 KIRREL
SE_02_041100133 chr1:171983098-172008888 25790 133 2 608 29 1 59 114 DNM3,MIR3120
SE_02_041100031 chr1:172132300-172151887 19587 31 1 473 17 4 128 716 MIR214,MIR199A2,DNM3,MIR3120
SE_02_041100102 chr1:172157686-172167231 9545 102 1 252 9 0 20 0 DNM3,MIR199A2,MIR3120,MIR214
SE_02_041100037 chr1:172167492-172190179 22687 37 1 540 40 0 65 52 DNM3,MIR199A2,MIR3120,MIR214
SE_02_041100125 chr1:172236018-172298857 62839 125 7 1498 56 7 268 37 DNM3,MIR199A2
SE_02_041100004 chr1:172320225-172462714 142489 4 10 3376 287 17 575 1464 PIGC,C1ORF105,DNM3
SE_02_041100088 chr1:183983043-184076204 93161 88 10 2477 231 8 273 586 TSEN15,GLT25D2
SE_02_041100193 chr1:205272736-205325778 53042 193 8 1462 142 16 278 1382 NUAK2,TMCC2,KLHDC8A
SE_02_041100045 chr1:234597637-234634256 36619 45 5 975 70 4 0 1027 IRF2BP2,NCRNA00184
SE_02_041100023 chr1:234953627-235025930 72303 23 7 2221 69 7 246 308 SNORA14B
SE_02_041100204 chr1:235078897-235113784 34887 204 8 886 78 3 20 268 TOMM20,SNORA14B,RBM34
SE_02_041100132 chr1:66229223-66276108 46885 132 7 1222 21 3 244 156 PDE4B
SE_02_041100165 chr1:66323981-66357456 33475 165 6 777 7 4 207 218 PDE4B
SE_02_041100057 chr1:8113644-8242082 128438 57 18 4174 274 9 122 0 SLC45A1
SE_02_041100092 chr10:100871907-100917845 45938 92 4 1176 116 7 487 380 FAM178A
SE_02_041100186 chr10:109955677-109980864 25187 186 4 629 32 5 171 0 ADD3,XPNPEP1
SE_02_041100112 chr10:113052842-113139800 86958 112 13 2290 27 9 713 423 TCF7L2
SE_02_041100218 chr10:13701667-13762044 60377 218 13 1942 32 14 156 298 FRMD4A,PRPF18
SE_02_041100134 chr10:16814475-16869309 54834 134 7 1716 105 11 65 642 CUBN,RSU1
SE_02_041100040 chr10:16943091-17032559 89468 40 9 2803 289 40 128 506 CUBN
SE_02_041100140 chr10:17198004-17258663 60659 140 7 1774 194 7 203 989 VIM,TRDMT1
SE_02_041100199 chr10:21313419-21386422 73003 199 11 2132 137 1 83 0 MIR1915
SE_02_041100056 chr10:29226879-29287017 60138 56 6 1787 70 1 107 0 LYZL1
SE_02_041100007 chr10:29301843-29497855 196012 7 23 5979 547 9 261 2717 SVIL,LYZL1,LOC387647,MIR604
SE_02_041100169 chr10:32947741-33009528 61787 169 9 1553 160 12 64 318 ITGB1
SE_02_041100146 chr10:4402760-4441288 38528 146 4 1243 22 0 81 248 LOC338588
SE_02_041100138 chr10:4649921-4706454 56533 138 7 1666 46 4 80 437 LOC338588,LOC100216001
SE_02_041100082 chr10:4754099-4815549 61450 82 9 1955 159 8 76 0 AKR1E2
SE_02_041100048 chr10:72217340-72338615 121275 48 23 3338 278 2 383 1983 DDIT4,DNAJB12,ANAPC16,ASCC1
SE_02_041100197 chr11:10291864-10327348 35484 197 5 791 74 9 317 708 ADM,SBF2
SE_02_041100246 chr11:61947332-61981724 34392 246 6 877 87 33 136 2194 FTH1,BEST1,RAB3IL1
SE_02_041100201 chr11:65415957-65455777 39820 201 6 1097 81 2 52 2791 MIR612,NEAT1,FRMD8,MALAT1,SLC25A45
SE_02_041100084 chr11:65470317-65509778 39461 84 5 1126 119 4 50 963 MALAT1,NEAT1,MIR612,SCYL1,LTBP3
SE_02_041100192 chr12:124904269-124941489 37220 192 6 1283 47 4 71 1108 UBC,SCARB1,DHX37
SE_02_041100046 chr12:46356934-46496146 139212 46 17 3641 265 3 392 822 SLC38A2
SE_02_041100151 chr12:46520302-46564346 44044 151 4 1082 58 3 65 0 SLC38A2
SE_02_041100101 chr12:65875387-65970728 95341 101 14 2285 57 17 449 1278 HMGA2,RPSAP52
SE_02_041100065 chr12:65996958-66113748 116790 65 16 3140 268 10 341 55 LLPH
SE_02_041100042 chr12:89151552-89254837 103285 42 12 2524 72 8 308 0 DUSP6
SE_02_041100033 chr12:89276400-89356912 80512 33 8 2050 98 3 382 485 DUSP6
SE_02_041100001 chr12:91096050-91383929 287879 1 18 7330 342 22 434 669 DCN,LUM,KERA
SE_02_041100072 chr13:23466493-23520161 53668 72 9 1598 102 4 34 301 SACS
SE_02_041100237 chr13:23550890-23582196 31306 237 8 853 46 4 87 241 TNFRSF19
SE_02_041100097 chr13:59316337-59371287 54950 97 2 1546 3 9 385 0 DIAPH3
SE_02_041100206 chr13:59468155-59498014 29859 206 2 842 0 2 174 0 DIAPH3
SE_02_041100150 chr13:79627078-79685622 58544 150 6 1486 70 7 155 40 NDFIP2
SE_02_041100104 chr13:80329918-80365804 35886 104 6 901 14 0 253 577 SPRY2
SE_02_041100182 chr14:100372224-100422302 50078 182 8 1350 97 7 322 618 WDR25,WARS,SLC25A47
SE_02_041100196 chr14:100644777-100697398 52621 196 10 1695 126 7 135 402 C14ORF70,DLK1
SE_02_041100130 chr14:32451316-32515342 64026 130 7 1836 42 5 122 35 AKAP6
SE_02_041100219 chr14:49965850-50004424 38574 219 6 1028 66 1 50 512 C14ORF182
SE_02_041100055 chr14:53488708-53544749 56041 55 3 1488 32 7 264 0 DDHD1
SE_02_041100078 chr14:53923892-53958403 34511 78 5 836 39 8 347 801 BMP4
SE_02_041100025 chr14:54171824-54233240 61416 25 4 1621 58 6 155 0 CDKN3
SE_02_041100067 chr14:54325189-54368034 42845 67 3 1248 67 2 108 0 CDKN3
SE_02_041100036 chr14:67918347-68061080 142733 36 17 3340 108 11 336 0 RAD51L1
SE_02_041100005 chr14:68074329-68279642 205313 5 14 4975 192 62 922 82 RAD51L1
SE_02_041100171 chr14:77021479-77053591 32112 171 5 881 64 11 481 1041 C14ORF4,KIAA1737
SE_02_041100143 chr15:34580502-34623826 43324 143 5 1000 151 2 52 0 GOLGA8B
SE_02_041100174 chr15:35136427-35187526 51099 174 8 1297 50 1 233 0 LOC723972
SE_02_041100044 chr15:35285941-35333370 47429 44 3 1115 27 1 329 0 MIR3942,LOC723972
SE_02_041100144 chr15:37091219-37135978 44759 144 3 1085 7 4 512 790 MEIS2
SE_02_041100213 chr15:37869979-37910457 40478 213 7 1072 18 11 324 0 TMCO5A
SE_02_041100178 chr15:62845007-62913052 68045 178 7 2300 174 17 93 0 MIR190
SE_02_041100142 chr15:63035009-63095449 60440 142 13 1821 205 10 318 1671 TPM1,LACTB
SE_02_041100113 chr15:63460286-63525181 64895 113 11 1742 153 7 254 198 USP3
SE_02_041100117 chr15:94575947-94612455 36508 117 2 1144 0 0 202 0 MCTP2
SE_02_041100024 chr15:95124362-95199369 75007 24 4 2119 131 5 189 0 LOC400456
SE_02_041100066 chr15:95256971-95306345 49374 66 3 1446 49 8 407 166 LOC400456
SE_02_041100075 chr15:96323985-96358188 34203 75 3 782 4 0 815 1301 NR2F2,MIR1469
SE_02_041100135 chr15:98841199-98903767 62568 135 9 1939 33 5 287 391 IGF1R,PGPEP1L
SE_02_041100136 chr16:29114243-29204064 89821 136 13 3191 423 16 0 107 RRN3P2
SE_02_041100107 chr16:29255601-29301002 45401 107 5 1633 216 0 0 186 RUNDC2C
SE_02_041100243 chr16:69393478-69426427 32949 243 5 792 70 0 95 123 CYB5B,TMED6,TERF2
SE_02_041100231 chr16:74063936-74109280 45344 231 12 1467 29 3 0 0 PSMD7
SE_02_041100118 chr16:88228441-88276165 47724 118 8 1969 81 5 15 0 ZNF469
SE_02_041100241 chr17:45146334-45173747 27413 241 3 729 46 5 243 1698 HEXIM2,HEXIM1,FMNL1,PLCD3,ACBD4
SE_02_041100086 chr17:47973128-48027516 54388 86 10 1416 198 1 11 1069 COPZ2,CDK5RAP3,NFE2L1,PRR15L,PNPO,MIR152
SE_02_041100059 chr17:48180268-48267335 87067 59 9 1743 248 14 736 263 SKAP1,MIR1203
SE_02_041100175 chr17:48578132-48607315 29183 175 1 680 71 4 580 2196 HOXB4,HOXB6,LOC404266,HOXB7,HOXB5,MIR10A,HOXB1,HOXB3,MIR196A1,HOXB2,HOXB9,HOXB8
SE_02_041100041 chr17:55565977-55675107 109130 41 11 2964 128 7 240 0 TMEM100
SE_02_041100145 chr17:55688832-55736937 48105 145 4 1366 10 4 147 408 TMEM100,PCTP
SE_02_041100010 chr17:59746365-59861345 114980 10 17 2526 244 8 281 534 TUBD1,MIR21,TMEM49,PTRH2,RPS6KB1
SE_02_041100221 chr18:24653836-24674560 20724 221 2 582 40 1 157 266 HRH4
SE_02_041100116 chr18:24723694-24745523 21829 116 1 637 20 0 68 0 HRH4
SE_02_041100011 chr18:24761152-24897931 136779 11 14 4089 83 15 818 0 HRH4
SE_02_041100093 chr18:24911764-24990490 78726 93 13 2029 34 4 501 0 ZNF521
SE_02_041100238 chr18:3446247-3467489 21242 238 3 585 21 3 215 979 TGIF1
SE_02_041100026 chr18:3585259-3672279 87020 26 16 2451 122 10 128 797 FLJ35776,DLGAP1
SE_02_041100098 chr18:6539409-6572797 33388 98 4 1032 51 11 69 0 L3MBTL4,ARHGAP28
SE_02_041100058 chr18:6601934-6663702 61768 58 5 1925 21 7 70 0 ARHGAP28
SE_02_041100049 chr18:6719535-6785369 65834 49 8 1775 196 8 162 0 ARHGAP28
SE_02_041100127 chr18:70365681-70427023 61342 127 7 1883 103 7 74 0 SOCS6
SE_02_041100131 chr18:70442699-70493861 51162 131 7 1506 119 4 74 0 SOCS6
SE_02_041100234 chr19:13139518-13182486 42968 234 8 1149 64 2 120 1758 STX10,NACC1,IER2,TRMT1,LYL1
SE_02_041100195 chr19:46111543-46150719 39176 195 4 1032 64 0 2 467 IGFL3,IGFL2
SE_02_041100021 chr2:137854868-137986043 131175 21 11 3712 86 21 31 250 HNMT
SE_02_041100006 chr2:143319276-143555077 235801 6 16 6280 194 17 1650 148 ARHGAP15
SE_02_041100106 chr2:161220679-161274547 53868 106 5 1108 49 2 293 501 TANK,PSMD14
SE_02_041100126 chr2:162106500-162182436 75936 126 6 2095 111 1 388 425 GCG,FAP,DPP4
SE_02_041100153 chr2:172082257-172104651 22394 153 1 531 12 0 582 1420 DLX1,DLX2
SE_02_041100159 chr2:176123193-176141496 18303 159 3 466 26 3 214 1811 HOXD9,HOXD8,HOXD4,HOXD12,EVX2,HOXD11,HOXD10,MIR10B,LOC401022,HOXD3,HOXD1,HOXD13
SE_02_041100176 chr2:177143074-177172448 29374 176 4 643 32 1 143 0 HNRNPA3
SE_02_041100071 chr2:177530193-177573620 43427 71 3 1077 115 8 93 748 AGPS,TTC30B,TTC30A
SE_02_041100002 chr2:177591087-177769698 178611 2 7 5003 651 19 780 1606 PDE11A,TTC30A,TTC30B
SE_02_041100222 chr2:187540896-187596331 55435 222 5 1469 125 0 0 50 TFPI
SE_02_041100183 chr2:188509428-188529915 20487 183 1 460 13 0 40 41 GULP1,MIR561
SE_02_041100060 chr2:188966636-188989483 22847 60 1 562 13 0 97 314 COL3A1,MIR1245,MIR3606
SE_02_041100220 chr2:188998588-189023677 25089 220 1 685 42 0 128 929 COL3A1,MIR1245,MIR3606
SE_02_041100022 chr2:189113570-189232797 119227 22 13 2814 168 2 174 129 COL5A2,MIR3129
SE_02_041100162 chr2:189368049-189414573 46524 162 3 1149 104 1 47 0 WDR75
SE_02_041100009 chr2:41692882-41787092 94210 9 8 3763 44 32 200 0 LOC388942
SE_02_041100115 chr2:41825299-41880251 54952 115 7 2060 46 4 102 218 LOC388942
SE_02_041100179 chr2:41927837-41968799 40962 179 5 1314 86 4 317 721 LOC388942
SE_02_041100096 chr2:42040246-42065746 25500 96 3 813 75 4 248 1112 PKDCC
SE_02_041100062 chr2:42082351-42148428 66077 62 9 2139 168 6 194 0 PKDCC,EML4
SE_02_041100235 chr2:43217669-43229770 12101 235 2 404 18 0 204 1185 ZFP36L2,LOC100129726
SE_02_041100217 chr2:70083898-70091281 7383 217 1 232 19 0 131 686 LOC400960,PCBP1,LOC100133985
SE_02_041100200 chr20:10634304-10676660 42356 200 7 1130 50 12 703 2140 JAG1
SE_02_041100020 chr20:11204522-11278260 73738 20 4 2280 136 15 434 323 JAG1
SE_02_041100129 chr20:11328957-11354881 25924 129 1 670 7 1 90 0 BTBD3
SE_02_041100047 chr20:11400902-11462893 61991 47 4 1551 6 6 118 0 BTBD3
SE_02_041100180 chr20:47347896-47363176 15280 180 3 374 3 4 142 787 ZMYND8,LOC100131496
SE_02_041100122 chr20:50635230-50744953 109723 122 25 3072 211 4 197 541 FAM65C,PARD6B,BCAS4,MIR645
SE_02_041100018 chr20:51847711-52061865 214154 18 35 6092 185 18 192 0 SALL4
SE_02_041100128 chr20:53578969-53625656 46687 128 6 1144 9 1 169 449 ZNF217
SE_02_041100083 chr20:53733810-53832399 98589 83 14 2925 57 11 53 0 SUMO1P1
SE_02_041100052 chr20:53855094-53962473 107379 52 15 2936 50 8 144 475 BCAS1,SUMO1P1
SE_02_041100100 chr20:59024284-59042849 18565 100 1 465 27 4 0 831 TUBB1,ATP5E,SLMO2,CTSZ,TH1L
SE_02_041100109 chr20:59060841-59090287 29446 109 3 721 76 2 0 0 TUBB1,ATP5E,SLMO2
SE_02_041100061 chr20:59205079-59279042 73963 61 10 1971 114 11 232 736 ZNF831,EDN3
SE_02_041100063 chr20:59293209-59423623 130414 63 18 3959 61 14 438 777 EDN3
SE_02_041100188 chr21:15965245-16009164 43919 188 7 1193 3 2 70 0 C21ORF34
SE_02_041100081 chr21:16275006-16332594 57588 81 6 1567 7 3 279 19 C21ORF34
SE_02_041100247 chr21:28769127-28830115 60988 247 5 1732 252 8 141 0 N6AMT1
SE_02_041100239 chr21:36817844-36867722 49878 239 10 1423 134 2 118 0 HLCS,SIM2
SE_02_041100016 chr3:14199038-14293206 94168 16 9 2872 252 9 194 171 XPC,LSM3
SE_02_041100209 chr3:14401473-14492058 90585 209 19 2803 128 25 417 2789 SLC6A6,GRIP2
SE_02_041100121 chr3:149168605-149228269 59664 121 12 1644 156 5 175 1116 CP,HPS3
SE_02_041100034 chr3:149271001-149394116 123115 34 16 3432 234 23 104 973 TM4SF18,TM4SF1,CP
SE_02_041100190 chr3:171768208-171844027 75819 190 10 2027 187 13 144 212 PLD1,TMEM212
SE_02_041100202 chr3:177809325-177856173 46848 202 5 1275 17 2 151 60 TBL1XR1
SE_02_041100156 chr3:177956388-177997159 40771 156 4 1113 22 1 52 0 KCNMB2
SE_02_041100028 chr3:178020560-178111124 90564 28 5 2381 7 8 140 0 KCNMB2
SE_02_041100227 chr3:178242195-178265375 23180 227 1 615 1 10 37 0 KCNMB2
SE_02_041100163 chr3:178291316-178357538 66222 163 8 1690 35 6 86 267 KCNMB2
SE_02_041100244 chr3:30166872-30200659 33787 244 4 977 0 6 62 0 TGFBR2
SE_02_041100230 chr3:30340502-30379395 38893 230 3 1128 70 5 66 0 TGFBR2
SE_02_041100158 chr3:30720218-30779070 58852 158 6 1982 122 7 66 238 GADL1,TGFBR2
SE_02_041100003 chr4:111629460-111857639 228179 3 19 5452 136 15 745 0 C4ORF32
SE_02_041100070 chr4:111921242-111961110 39868 70 3 1001 41 3 120 0 C4ORF32
SE_02_041100073 chr4:112018863-112075883 57020 73 6 1446 116 0 101 0 C4ORF32
SE_02_041100123 chr4:123398579-123420663 22084 123 1 540 9 1 91 431 SPRY1
SE_02_041100008 chr4:123552333-123705358 153025 8 14 3833 137 11 264 597 LOC285419
SE_02_041100152 chr4:123737011-123753825 16814 152 2 449 19 3 16 0 LOC285419
SE_02_041100038 chr4:123802291-123878282 75991 38 4 1917 72 6 173 251 LOC285419
SE_02_041100124 chr4:156290518-156313215 22697 124 2 578 6 2 39 0 CTSO
SE_02_041100108 chr4:157977795-158026731 48936 108 5 1120 142 1 104 0 FAM198B
SE_02_041100185 chr4:158040333-158062346 22013 185 5 527 31 2 15 0 FAM198B
SE_02_041100154 chr4:158156059-158175062 19003 154 2 426 24 1 83 557 FAM198B,TMEM144
SE_02_041100223 chr4:173520571-173532850 12279 223 2 338 10 1 147 773 NBLA00301,HAND2
SE_02_041100068 chr4:173905000-173961379 56379 68 5 1438 58 4 301 0 MORF4,KIAA1712
SE_02_041100017 chr4:173978295-174048553 70258 17 5 1980 113 5 279 0 KIAA1712
SE_02_041100032 chr4:174069138-174160220 91082 32 8 2656 186 7 371 296 KIAA1712
SE_02_041100043 chr4:174195918-174227534 31616 43 2 796 49 6 187 31 KIAA1712
SE_02_041100216 chr4:174258374-174287154 28780 216 4 643 38 1 60 258 KIAA1712,FBXO8
SE_02_041100099 chr4:185795715-185884062 88347 99 14 2744 142 7 186 158 SORBS2
SE_02_041100189 chr4:40176024-40206767 30743 189 7 888 58 4 54 106 RHOH
SE_02_041100160 chr4:40306211-40339141 32930 160 4 970 26 4 66 556 CHRNA9
SE_02_041100236 chr4:40625115-40683069 57954 236 8 1643 25 1 123 266 RBM47
SE_02_041100079 chr4:4480024-4544910 64886 79 6 1845 115 5 317 266 STX18
SE_02_041100054 chr4:57034537-57121261 86724 54 10 2474 354 11 229 330 LOC255130,IGFBP7
SE_02_041100050 chr5:123782175-123845755 63580 50 4 1981 77 24 331 0 CSNK1G3
SE_02_041100214 chr5:123870481-123885718 15237 214 1 367 2 0 107 0 CSNK1G3
SE_02_041100161 chr5:124620402-124680178 59776 161 6 1614 30 2 558 787 ZNF608
SE_02_041100164 chr5:124729509-124750483 20974 164 2 443 3 2 370 346 ZNF608
SE_02_041100139 chr5:135957987-136033376 75389 139 9 2095 175 16 178 185 TGFBI,FBXL21,VTRNA2,LECT2
SE_02_041100245 chr5:141803661-141852024 48363 245 10 1238 157 9 455 0 PCDH1,LOC729080
SE_02_041100111 chr5:39445051-39503809 58758 111 8 1674 56 2 154 101 DAB2
SE_02_041100074 chr5:39517231-39585168 67937 74 7 1982 105 9 128 0 DAB2
SE_02_041100069 chr5:39657545-39743338 85793 69 10 2563 104 6 107 0 DAB2
SE_02_041100224 chr5:65009817-65042635 32818 224 5 821 56 6 170 80 CWC27
SE_02_041100090 chr5:65060591-65106793 46202 90 5 1202 113 7 234 0 CWC27
SE_02_041100147 chr5:91010168-91051578 41410 147 5 934 25 0 78 0 GPR98,LOC100129716
SE_02_041100225 chr5:91367769-91387092 19323 225 5 403 16 0 232 731 ARRDC3,LOC100129716
SE_02_041100091 chr5:93588647-93612880 24233 91 1 482 15 1 415 140 NR2F1,FLJ42709,MIR2277
SE_02_041100205 chr5:93882593-93916586 33993 205 2 641 26 1 409 0 FAM172A,POU5F2
SE_02_041100203 chr5:94847580-94910051 62471 203 6 1418 65 7 475 293 MCTP1
SE_02_041100076 chr6:110327969-110372343 44374 76 4 1162 86 6 128 207 C6ORF186,DDO
SE_02_041100170 chr6:110387389-110433369 45980 170 6 1447 182 5 67 650 SLC22A16,DDO,C6ORF186
SE_02_041100181 chr6:110516493-110543893 27400 181 3 750 64 2 1 0 SLC22A16,DDO
SE_02_041100168 chr6:112279203-112340142 60939 168 7 1664 64 13 157 0 LAMA4,RFPL4B
SE_02_041100184 chr6:11472784-11497720 24936 184 1 786 189 7 58 245 TMEM170B
SE_02_041100027 chr6:11573265-11669029 95764 27 12 2716 130 13 251 545 TMEM170B
SE_02_041100157 chr6:12288413-12316359 27946 157 2 761 46 6 114 586 EDN1
SE_02_041100035 chr6:12526565-12615260 88695 35 5 2598 15 8 331 0 PHACTR1,EDN1
SE_02_041100030 chr6:137312648-137370382 57734 30 2 1569 16 7 301 0 IFNGR1
SE_02_041100166 chr6:137690965-137710904 19939 166 1 636 25 4 59 0 TNFAIP3
SE_02_041100173 chr6:137725540-137752542 27002 173 3 817 14 1 45 0 TNFAIP3
SE_02_041100077 chr6:137773744-137829758 56014 77 6 1634 63 9 109 124 TNFAIP3
SE_02_041100120 chr6:137847128-137883950 36822 120 3 901 24 10 0 1381 TNFAIP3
SE_02_041100212 chr6:142355315-142411869 56554 212 5 1337 43 21 206 602 GPR126
SE_02_041100240 chr6:150855970-150892728 36758 240 7 1047 44 4 47 897 MTHFD1L
SE_02_041100019 chr6:161372968-161460452 87484 19 8 2717 21 3 146 61 PARK2,AGPAT4
SE_02_041100064 chr6:161571482-161620119 48637 64 7 1282 5 23 83 0 PARK2,AGPAT4
SE_02_041100210 chr7:104921767-104986032 64265 210 9 1577 87 1 80 793 LOC723809,MLL5,LOC100216545
SE_02_041100155 chr7:130391021-130444962 53941 155 9 1271 107 0 294 1577 TSGA14,MEST,CPA5,CPA1,MESTIT1
SE_02_041100198 chr7:25388640-25433905 45265 198 6 1558 77 2 244 0 NPVF,C7ORF31
SE_02_041100233 chr7:25547190-25580915 33725 233 2 1098 46 9 100 0 NPVF,C7ORF31
SE_02_041100051 chr7:25615866-25735878 120012 51 15 3263 193 7 699 158 MIR148A
SE_02_041100087 chr7:25828704-25864577 35873 87 2 907 63 6 273 36 MIR148A
SE_02_041100095 chr7:47555838-47655947 100109 95 15 3062 130 2 162 243 C7ORF65,TNS3
SE_02_041100114 chr7:47756792-47793346 36554 114 5 1126 109 4 59 349 PKD1L1,C7ORF69
SE_02_041100029 chr7:81446037-81585080 139043 29 14 3690 11 1 212 336 HGF
SE_02_041100013 chr7:81598978-81642942 43964 13 2 1039 3 1 95 81 HGF
SE_02_041100012 chr7:81662037-81795184 133147 12 11 3231 16 13 605 1041 HGF
SE_02_041100208 chr7:82039644-82055192 15548 208 2 404 0 0 28 0 CACNA2D1,HGF
SE_02_041100053 chr7:94210960-94304795 93835 53 11 2371 21 7 358 0 COL1A2
SE_02_041100207 chr8:103103286-103154106 50820 207 11 1557 197 14 46 623 C8ORF56,BAALC,LOC100499183,MIR3151
SE_02_041100085 chr8:103240983-103305666 64683 85 8 1495 189 3 95 542 FZD6
SE_02_041100137 chr8:103320670-103382387 61717 137 6 1596 262 6 153 713 FZD6,CTHRC1,SLC25A32,DCAF13
SE_02_041100242 chr8:73449169-73505863 56694 242 11 1387 99 9 251 0 STAU2,RDH10
SE_02_041100148 chr8:77999647-78036895 37248 148 2 998 25 1 145 0 PKIA
SE_02_041100110 chr8:78058612-78144934 86322 110 13 2212 107 2 301 0 PKIA
SE_02_041100215 chr8:98157028-98186061 29033 215 5 843 48 3 53 281 POP1,HRSP12
SE_02_041100103 chr8:98209081-98255115 46034 103 4 1146 74 2 96 266 NIPAL2
SE_02_041100226 chr8:98321681-98340652 18971 226 1 463 37 5 119 0 NIPAL2
SE_02_041100014 chr9:115584610-115714274 129664 14 13 3411 199 16 452 0 C9ORF27
SE_02_041100039 chr9:115729358-115789353 59995 39 3 1534 39 1 209 26 C9ORF27
SE_02_041100211 chr9:115844867-115887225 42358 211 5 1188 13 2 86 0 C9ORF27
SE_02_041100194 chr9:115912394-115948703 36309 194 4 997 1 2 98 31 C9ORF27
SE_02_041100229 chr9:116147226-116167267 20041 229 4 462 0 0 164 279 PAPPA
SE_02_041100015 chr9:12632317-12739939 107622 15 9 3411 308 13 279 497 TYRP1,C9ORF150
SE_02_041100089 chr9:12771913-12829267 57354 89 5 1848 43 5 186 378 C9ORF150
SE_02_041100191 chr9:12849119-12885697 36578 191 3 1409 15 2 85 0 C9ORF150
SE_02_041100172 chr9:12911429-12948157 36728 172 4 1484 4 3 42 0 C9ORF150
SE_02_041100228 chrX:133980338-134027527 47189 228 8 809 13 4 591 197 GPC3
SE_02_041100080 chrX:20431623-20533460 101837 80 14 1897 57 0 607 85 RPS6KA3
SE_02_041100232 chrX:21726113-21759347 33234 232 4 550 21 1 178 249 SMPX
SE_02_041100119 chrX:21903097-21997547 94450 119 14 1916 99 8 220 686 SMS,YY2,PHEX
SE_02_041100094 chrX:2847501-2931024 83523 94 9 2071 141 6 0 2134 ARSD,GYG2,ARSE

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM1835895
Input ID: Name:GSM1835907
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb