SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000130733
Gene: YIPF2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:10922185-10928681 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_001600118 chr19:10808033-10880042 Sample_02_0016 Blood erythroblasts 118 13 2074 92 5 177 3611 TMED1,C19ORF38,DNM2,CARM1,MIR199A1,YIPF2,C19ORF52
SE_02_102900711 chr19:10850191-10899598 Sample_02_1029 Colon HCT116 711 21 1356 72 5 62 826 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_088600869 chr19:10851895-10901139 Sample_02_0886 Skin foreskin_ p63KLF4 869 15 1357 69 4 59 705 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_035500110 chr19:10851932-10904184 Sample_02_0355 Colon HCT15 110 14 1444 73 4 59 705 C19ORF38,CARM1,TMED1,MIR199A1,YIPF2,C19ORF52
SE_02_108600810 chr19:10852665-10900398 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 810 14 1318 65 4 59 705 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_077501672 chr19:10855546-10883941 Sample_02_0775 Pancreas EndoC-BH1_SE 1672 8 781 39 2 49 705 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_104800503 chr19:10857522-10915178 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 503 11 1620 79 4 88 1160 C19ORF38,CARM1,SMARCA4,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_109900828 chr19:10858525-10892000 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 828 8 942 46 2 50 582 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52,SMARCA4,C19orf52,C19orf38
SE_02_122900548 chr19:10858546-10899752 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 548 13 1156 58 3 54 582 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52,SMARCA4,C19orf52,C19orf38
SE_02_133100628 chr19:10859602-10900068 Sample_02_1331 Blood Molm13_CTRL 628 9 1149 55 3 54 582 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_082600856 chr19:10859821-10881818 Sample_02_0826 Stomach gastric tumor 856 17 617 27 2 43 556 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_104301025 chr19:10860955-10899622 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1025 17 1096 52 3 50 503 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_093001212 chr19:10861709-10879663 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1212 16 498 22 2 42 503 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_092900948 chr19:10861863-10891859 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 948 19 846 38 2 46 503 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_067200273 chr19:10862496-10901942 Sample_02_0672 Endometrium endometrium cancer_DSG 273 14 1108 52 3 52 503 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_081800373 chr19:10862557-10902189 Sample_02_0818 Ovary High-grade serous ovarian cancer 373 15 1119 53 3 52 503 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_143400497 chr19:10862594-10891828 Sample_02_1434 Trophoblast trophoblast stem cells 497 8 817 38 2 46 503 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_004500146 chr19:10862729-10892236 Sample_02_0045 Embryo endodermal CyT49_ES_D7 146 5 833 41 3 46 503 C19ORF38,CARM1,TMED1,MIR199A1,YIPF2,C19ORF52
SE_01_002100286 chr19:10862735-10898268 Sample_01_0021 Skin bipolar-neuron 286 8 1004 48 3 50 503 C19ORF38,CARM1,TMED1,MIR199A1,YIPF2,C19ORF52
SE_02_081700198 chr19:10862743-10902203 Sample_02_0817 Ovary Epithelial ovarian cancer 198 11 1116 53 3 52 503 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_139400364 chr19:10862811-10879094 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 364 5 448 21 1 42 503 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_139000729 chr19:10862923-10880257 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 729 3 476 21 2 42 503 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_119800954 chr19:10863041-10899658 Sample_02_1198 Brain GBM34 954 15 1026 50 3 50 493 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_074601138 chr19:10863090-10896601 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 1138 11 950 46 3 50 475 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_001900090 chr19:10863110-10899545 Sample_02_0019 Embryo Neural crest cells 90 16 1021 50 3 50 472 C19ORF38,CARM1,TMED1,MIR199A1,YIPF2,C19ORF52
SE_00_005601095 chr19:10863243-10900403 Sample_00_0056 Sigmoid colon sigmoid colon 3y 1095 19 1040 50 3 49 452 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_138801045 chr19:10863256-10879846 Sample_02_1388 Peripheral blood JB6_ALK+ 1045 5 454 21 2 39 444 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_138400239 chr19:10863369-10899534 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 239 13 1007 50 3 47 426 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_101600382 chr19:10863393-10896923 Sample_02_1016 Embryo H9_Mesendoderm_24h 382 10 945 46 3 47 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_078100496 chr19:10863475-10904854 Sample_02_0781 Lymphoma Pfeiffer_DMSO 496 14 1155 56 3 49 444 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_122401027 chr19:10863504-10889100 Sample_02_1224 Bone marrow normal plasma cell 1027 10 696 32 2 41 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_103200481 chr19:10863708-10900080 Sample_02_1032 Head and neck SCC1 JQ1 481 8 1014 48 3 47 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_078300855 chr19:10863899-10889262 Sample_02_0783 Blood MEC2 855 6 688 30 2 41 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_022800150 chr19:10864024-10900813 Sample_02_0228 Oesophagus KYSE510 150 10 1027 48 3 49 422 C19ORF38,CARM1,TMED1,MIR199A1,YIPF2,C19ORF52
SE_02_096700513 chr19:10864031-10899364 Sample_02_0967 Brain H3.3K27M_JN57 513 7 985 48 3 47 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_078400850 chr19:10864046-10880384 Sample_02_0784 Blood OSU-CLL 850 5 442 19 2 39 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_096600714 chr19:10864091-10899601 Sample_02_0966 Brain H3.3K27M_JN29-BS3 714 9 990 48 3 47 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_050600657 chr19:10864094-10915643 Sample_02_0506 Esophagus TE5_1 657 20 1450 68 4 81 944 C19ORF38,CARM1,SMARCA4,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_108300944 chr19:10864105-10916255 Sample_02_1083 Macula macula 944 20 1467 68 4 81 948 C19ORF38,CARM1,SMARCA4,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_101500346 chr19:10864124-10897780 Sample_02_1015 Embryo H9_ Undifferentiated 346 12 943 44 3 47 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_121800628 chr19:10864150-10881502 Sample_02_1218 Bone marrow Daudi 628 9 466 20 2 39 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_050400134 chr19:10864157-10911887 Sample_02_0504 Esophagus KYSE510_1 134 25 1326 64 3 71 710 C19ORF38,CARM1,SMARCA4,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_122700437 chr19:10864198-10880742 Sample_02_1227 Bone marrow U266 437 5 447 19 2 39 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_119301302 chr19:10864242-10899713 Sample_02_1193 Brain GBM27 1302 12 989 48 3 47 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_122500358 chr19:10864274-10888263 Sample_02_1225 Bone marrow RAJI 358 11 643 29 2 41 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_108200638 chr19:10864305-10900119 Sample_02_1082 Retina retina 638 19 999 48 3 47 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_119700983 chr19:10864440-10901828 Sample_02_1197 Brain GBM33 983 15 1044 49 3 49 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_021101150 chr19:10864556-10899846 Sample_02_0211 Lung MRC-5_NFD_1DPT 1150 6 988 48 3 47 422 C19ORF38,CARM1,TMED1,MIR199A1,YIPF2,C19ORF52
SE_02_055500637 chr19:10864597-10892179 Sample_02_0555 Other HAP1_WT 637 5 771 36 2 43 422 C19ORF38,CARM1,TMED1,YIPF2,MIR199A1,MIR6793,C19ORF52
SE_02_021600799 chr19:10865852-10891834 Sample_02_0216 Skin NHEK_scramble 799 5 717 33 2 43 422 C19ORF38,CARM1,TMED1,MIR199A1,YIPF2,C19ORF52
SE_02_032100661 chr19:10867161-10889660 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 661 3 606 27 2 41 422 C19ORF38,CARM1,TMED1,MIR199A1,YIPF2,C19ORF52
SE_02_032000663 chr19:10867298-10889255 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 663 3 590 27 2 41 422 C19ORF38,CARM1,TMED1,MIR199A1,YIPF2,C19ORF52
SE_02_122300629 chr19:10867726-10880435 Sample_02_1223 Bone marrow KMS28BM 629 3 337 16 2 39 422 C19ORF38,CARM1,TMED1,YIPF2,C19ORF52,MIR6793
SE_02_142901094 chr19:10867859-10889045 Sample_02_1429 Blood GM12878_WT 1094 4 570 26 2 41 422 C19ORF38,CARM1,TMED1,YIPF2,C19ORF52,MIR6793
SE_02_001700154 chr19:10869112-10899585 Sample_02_0017 Embryo H9_ESC 154 9 847 43 3 47 396 C19ORF38,CARM1,YIPF2,C19ORF52,TMED1
SE_02_004800876 chr19:10869235-10892216 Sample_02_0048 Embryo endodermal CyT49_HE 876 5 642 33 3 43 381 C19ORF38,CARM1,YIPF2,C19ORF52,TMED1
SE_02_138500210 chr19:10869245-10921884 Sample_02_1385 Other iPSCs 210 18 1492 76 4 155 1625 C19ORF38,CARM1,SMARCA4,TMED1,YIPF2,MIR6793,C19ORF52
SE_02_087200399 chr19:10869248-10899512 Sample_02_0872 Colon HCT116_siCtrl-5FU 399 6 840 43 3 47 376 C19ORF38,CARM1,TMED1,YIPF2,C19ORF52,MIR6793
SE_02_068100295 chr19:10869257-10889312 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 295 5 537 25 2 41 376 C19ORF38,CARM1,TMED1,YIPF2,C19ORF52,MIR6793
SE_02_116000139 chr19:10869363-10905360 Sample_02_1160 Embryo H1_shLuc 139 14 1005 49 3 55 446 C19ORF38,CARM1,TMED1,YIPF2,C19ORF52,MIR6793
SE_02_116100084 chr19:10869481-10897788 Sample_02_1161 Embryo H1_shZNF587 84 11 794 39 3 46 311 C19ORF38,CARM1,TMED1,YIPF2,C19ORF52,MIR6793
SE_02_004200157 chr19:10869670-10895025 Sample_02_0042 Embryo endodermal CyT49_ES_D0 157 6 713 37 3 46 271 C19ORF38,CARM1,YIPF2,C19ORF52,TMED1
SE_00_001900198 chr19:10870176-10891721 Sample_00_0019 Dermal fibroblasts iPS-20b 198 5 599 30 2 41 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_02_006400756 chr19:10870313-10889414 Sample_02_0064 Embryo DN-Early_G1 756 5 513 25 2 40 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_00_001800308 chr19:10870318-10889427 Sample_00_0018 Dermal fibroblasts iPS-18axian 308 4 512 25 2 40 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_00_001000285 chr19:10870346-10897789 Sample_00_0010 Embryo endodermal-cell 285 7 767 39 3 46 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_02_003600428 chr19:10870349-10899103 Sample_02_0036 Embryo H7 428 16 801 41 3 46 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_00_002501027 chr19:10870377-10899799 Sample_00_0025 Muscle of leg muscle-of-leg 1027 7 820 43 3 46 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_00_003200215 chr19:10870389-10902394 Sample_00_0032 Psoas muscle psoas-muscle_30y 215 7 899 45 3 48 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_00_001200589 chr19:10870398-10889413 Sample_00_0012 Embryo H1-hESC 589 5 508 25 2 40 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_00_001600328 chr19:10870403-10889395 Sample_00_0016 Foreskin iPS-DF-19.11 333 3 506 25 2 40 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_02_004600631 chr19:10870414-10892656 Sample_02_0046 Embryo endodermal CyT49_ES_D10 631 6 619 33 3 46 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_00_003300454 chr19:10870442-10892831 Sample_00_0033 Psoas muscle psoas-muscle_3y 454 6 621 33 3 46 227 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_02_047701201 chr19:10871580-10900191 Sample_02_0477 Colon intestinal epithelial organoids_139a 1201 10 803 38 3 36 166 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_01_009700459 chr19:10871690-10922503 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 459 7 1461 71 4 155 1544 CARM1,SMARCA4,TMED1,YIPF2,MIR6793,C19ORF52,C19ORF38
SE_02_107800185 chr19:10875147-10899587 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 185 14 691 36 3 12 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_041800145 chr19:10876207-10889480 Sample_02_0418 Embryo H9_Null+EZH2 145 4 346 14 2 6 0 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_02_093200216 chr19:10876229-10896871 Sample_02_0932 Embryo H9 WT_1 216 9 581 28 3 12 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_093400218 chr19:10876338-10894382 Sample_02_0934 Embryo H7-WT 218 6 497 22 2 12 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_074300161 chr19:10876349-10899467 Sample_02_0743 Embryo ES derived mesoderm_day2 161 15 636 30 2 12 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_032800333 chr19:10877679-10892920 Sample_02_0328 Embryo H9_naive 333 3 419 20 2 9 0 CARM1,YIPF2,C19ORF52,C19ORF38,TMED1
SE_02_050300058 chr19:10877680-10905456 Sample_02_0503 Esophagus KYSE140_1 58 10 774 39 2 18 103 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_051500057 chr19:10877685-10905456 Sample_02_0515 Esophagus KYSE140 57 11 774 39 2 18 103 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_101701207 chr19:10877852-10922251 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1207 13 1268 63 3 124 1328 CARM1,SMARCA4,TMED1,YIPF2,MIR6793,C19ORF52,C19ORF38
SE_02_075701079 chr19:10877905-10891730 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 1079 3 380 17 1 5 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_074200491 chr19:10877963-10899602 Sample_02_0742 Embryo ESCs_day0 491 18 603 30 2 9 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_136300212 chr19:10877968-10905870 Sample_02_1363 Blood Hudep2 212 9 781 39 2 18 103 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_068500760 chr19:10878014-10899772 Sample_02_0685 Lung NCI-H1048_no infection 760 7 608 30 2 9 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_074400809 chr19:10878066-10889085 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 809 6 290 12 1 3 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_067600321 chr19:10878209-10892599 Sample_02_0676 Embryo H1 hESC-derived neural progenitor cells_Smad_3hr 321 9 404 20 2 8 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38,SMARCA4
SE_02_067900182 chr19:10878372-10892028 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 182 18 385 18 1 4 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38,SMARCA4
SE_02_123900297 chr19:10878374-10898980 Sample_02_1239 Skin Waga_virus_positive 297 9 578 28 2 8 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_102700482 chr19:10878821-10899685 Sample_02_1027 Esophagus KYSE180_1 482 14 593 30 2 8 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_069700676 chr19:10878824-10900008 Sample_02_0697 Lung NCI-H1048-cas9_sgHROSA 676 12 605 30 2 8 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_067800309 chr19:10878851-10889257 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 309 7 283 12 1 2 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_055900982 chr19:10878927-10891552 Sample_02_0559 iPSCs FX52 iPSCs dC-T 982 8 354 16 1 3 0 CARM1,TMED1,YIPF2,C19ORF52,MIR6793,C19ORF38
SE_02_069600163 chr19:10879068-10899539 Sample_02_0696 Lung COR-L311 163 11 581 30 2 8 0 CARM1,TMED1,YIPF2,C19ORF52,C19ORF38
SE_02_067700398 chr19:10879080-10891488 Sample_02_0677 Embryo H1 hESC-derived neural progenitor cells_Smad_6hr 398 4 348 16 1 2 0 CARM1,TMED1,YIPF2,C19ORF52,C19ORF38,SMARCA4
SE_02_049300629 chr19:10879333-10892624 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 629 4 380 20 2 8 0 CARM1,TMED1,YIPF2,C19ORF52,C19ORF38
SE_02_068000293 chr19:10879456-10894324 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 293 8 427 22 2 8 0 CARM1,TMED1,YIPF2,C19ORF52,C19ORF38,SMARCA4
SE_02_114500894 chr19:10880121-10916013 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 894 12 1025 49 2 42 522 CARM1,C19ORF52,TMED1,YIPF2,SMARCA4,C19ORF38
SE_02_067400409 chr19:10884107-10902286 Sample_02_0674 Endometrium E1_FA 409 10 528 24 1 10 0 CARM1,TMED1,YIPF2,C19ORF52,C19ORF38
SE_02_129000333 chr19:10884447-10899717 Sample_02_1290 Lung NCI-H69_p8-15 333 5 442 22 1 8 0 CARM1,TMED1,YIPF2,C19ORF52,C19ORF38
SE_02_123700418 chr19:10884850-10899613 Sample_02_1237 Skin MKL2_virus_positive 418 5 424 22 1 8 0 CARM1,TMED1,YIPF2,C19ORF52,C19ORF38
SE_02_129200152 chr19:10887609-10899335 Sample_02_1292 Lung JHU-LX110-SCLC PDX 152 5 359 20 1 6 0 CARM1,YIPF2,C19ORF38,C19ORF52
SE_02_085300304 chr19:10890858-10903046 Sample_02_0853 Mammary gland MCF7L-TamR 304 1 355 19 1 8 0 CARM1,YIPF2,C19ORF38,C19ORF52
SE_02_056300176 chr19:10930963-10989417 Sample_02_0563 Mammary gland MCF7L-P_0h 176 25 1880 152 4 97 1063 SMARCA4,YIPF2,C19ORF52
SE_02_074800240 chr19:10936339-10964565 Sample_02_0748 Mammary gland HCC1599_WO 240 7 870 67 2 32 184 SMARCA4,YIPF2,C19ORF52
SE_02_068701118 chr19:10936435-10943188 Sample_02_0687 Lung NCI-H146_no infection 1118 2 192 8 0 0 0 YIPF2,SMARCA4,C19ORF52
SE_02_050400589 chr19:10936443-10976671 Sample_02_0504 Esophagus KYSE510_1 589 16 1281 102 3 36 184 SMARCA4,YIPF2,C19ORF52
SE_02_081800325 chr19:10936456-10981463 Sample_02_0818 Ovary High-grade serous ovarian cancer 325 15 1426 115 3 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_143300609 chr19:10936459-10980273 Sample_02_1433 Bone A673 STAG2 null 609 17 1399 115 3 36 184 SMARCA4,YIPF2,C19ORF52
SE_02_122500213 chr19:10936497-10981552 Sample_02_1225 Bone marrow RAJI 213 28 1425 116 4 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_025700568 chr19:10936540-10976906 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 568 6 1282 106 3 36 184 SMARCA4,YIPF2,C19ORF52
SE_02_074900475 chr19:10936558-10964945 Sample_02_0749 Mammary gland HCC1599_GSI 475 7 879 68 2 32 184 SMARCA4,YIPF2,C19ORF52
SE_02_062400370 chr19:10936678-10968470 Sample_02_0624 Mammary gland TAMR_VEH 370 8 1012 79 2 32 184 SMARCA4,YIPF2,C19ORF52
SE_02_035500196 chr19:10936689-10978126 Sample_02_0355 Colon HCT15 196 11 1318 111 3 36 184 SMARCA4,YIPF2,C19ORF52
SE_02_062300428 chr19:10936762-10963156 Sample_02_0623 Mammary gland TAMR_E2 428 4 810 65 2 31 184 SMARCA4,YIPF2,C19ORF52
SE_02_143200798 chr19:10936871-10981061 Sample_02_1432 Bone A673 STAG2 WT 798 20 1404 113 3 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_121800179 chr19:10936884-10981393 Sample_02_1218 Bone marrow Daudi 179 22 1408 113 3 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_076600496 chr19:10936886-10981046 Sample_02_0766 Ovary PEO1 496 18 1402 113 3 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_147000709 chr19:10936887-10977005 Sample_02_1470 Umbilical Vein H441 709 6 1275 105 3 36 184 SMARCA4,YIPF2,C19ORF52
SE_02_101700395 chr19:10936895-11034871 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 395 22 3126 247 6 209 3506 SMARCA4,YIPF2,C19ORF52
SE_02_125300738 chr19:10936917-10977837 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 738 18 1305 109 3 36 184 SMARCA4,YIPF2,C19ORF52
SE_02_158300573 chr19:10936945-10982108 Sample_02_1583 Fetal lung IMR90_empty_GM 573 16 1417 116 4 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_051500429 chr19:10938593-10963651 Sample_02_0515 Esophagus KYSE140 429 3 765 64 2 32 184 SMARCA4,YIPF2,C19ORF52
SE_02_050300430 chr19:10938605-10963650 Sample_02_0503 Esophagus KYSE140_1 430 3 765 64 2 32 184 SMARCA4,YIPF2,C19ORF52
SE_01_010701277 chr19:10938633-10980728 Sample_01_0107 Esophagus esophagus squamous epithelium 1277 12 1338 112 3 36 195 SMARCA4,YIPF2,C19ORF52
SE_02_078400915 chr19:10938715-10969504 Sample_02_0784 Blood OSU-CLL 915 10 982 78 2 36 184 SMARCA4,YIPF2,C19ORF52
SE_01_005500186 chr19:10938927-10982044 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 186 4 1355 114 4 36 251 SMARCA4,YIPF2,C19ORF52
SE_01_005300426 chr19:10939011-10981121 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 426 9 1338 111 3 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_115200421 chr19:10939173-10982201 Sample_02_1152 Lymphoma RL_WT_gRNA1 421 9 1354 114 4 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_130400718 chr19:10939214-10980867 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 718 19 1325 111 3 36 215 SMARCA4,YIPF2,C19ORF52
SE_02_073900423 chr19:10942252-10981697 Sample_02_0739 Blood Nalm6 423 11 1262 110 4 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_130200657 chr19:10945206-10981261 Sample_02_1302 Lymphoma RL DMSO 657 6 1173 103 3 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_103602826 chr19:10949079-10952757 Sample_02_1036 Mammary gland HCC70_XY018 2826 1 113 7 0 0 0 YIPF2,SMARCA4,C19ORF52
SE_01_006700279 chr19:10953747-10981742 Sample_01_0067 Peritoneal effusion: derived from metastatic site: peritoneal cavity SUDHL6 279 2 887 90 4 36 251 SMARCA4,YIPF2,C19ORF52
SE_01_009600415 chr19:10954293-10980894 Sample_01_0096 B-cell lymphoma DOHH2 415 3 858 88 3 36 224 SMARCA4,YIPF2,C19ORF52
SE_02_111200943 chr19:10958953-10982947 Sample_02_1112 T lymphocyte THP-6 T-ALL 943 6 772 66 3 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_036200290 chr19:10959568-10981188 Sample_02_0362 Haematopoietic and lymphoid tissue REH 290 5 703 60 2 36 251 SMARCA4,YIPF2,C19ORF52
SE_02_036300511 chr19:10959593-10971720 Sample_02_0363 Haematopoietic and lymphoid tissue 697 511 2 396 36 1 36 184 SMARCA4,YIPF2,C19ORF52
SE_02_122700607 chr19:10960925-10993166 Sample_02_1227 Bone marrow U266 607 13 1054 79 3 89 1135 SMARCA4,YIPF2,C19ORF52
SE_02_075800495 chr19:10960936-10981423 Sample_02_0758 Peripheral blood REH 495 13 661 52 2 21 191 SMARCA4,YIPF2,C19ORF52
SE_02_107500215 chr19:10960964-10981988 Sample_02_1075 Lymphoma BC-3 215 5 671 54 3 21 183 SMARCA4,YIPF2,C19ORF52
SE_02_104602912 chr19:10962744-10995815 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2912 6 1101 84 2 76 1089 SMARCA4,YIPF2,C19ORF52
SE_02_104301140 chr19:10962790-11005721 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1140 19 1419 116 2 90 1332 SMARCA4,YIPF2,C19ORF52
SE_02_057300751 chr19:10962862-10981467 Sample_02_0573 Blood Nalm6_1 751 11 609 49 2 5 67 SMARCA4,YIPF2,C19ORF52
SE_02_088500774 chr19:10963198-10981010 Sample_02_0885 Blood NALM6_2 774 6 593 48 1 5 54 SMARCA4,YIPF2,C19ORF52
SE_02_133400180 chr19:10976976-11041698 Sample_02_1334 Lung NCI-H1299_mutSMARCA4 180 14 2067 161 3 210 3602 SMARCA4,LDLR,C19ORF52,YIPF2
Genomic distribution of SEs associated with YIPF2
Genome Browser

The strength of the tissue affected by the gene

Expression of YIPF2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)