SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800240
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:10936339-10964565
Size: 28226
Super-enhancer rank 240
Number of SE elements: 7
ChIP density(Case|Control): 84748.565|4185.9158
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMARCA4 ;
ROSE Overlap SMARCA4 ;
ROSE Proximal YIPF2 ; C19orf52 ; SMARCA4 ;
ROSE Closest SMARCA4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SMARCA4 ; C19orf52 ; CARM1 ; YIPF2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800240 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers