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Super-enhancer overview

SE ID: SE_02_092900948
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr19:10861863-10891859
Size: 29996
Super-enhancer rank 948
Number of SE elements: 19
ChIP density(Case|Control): 16536.7948|2978.6028
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CARM1 ;
ROSE Overlap C19orf38 ; CARM1 ;
ROSE Proximal TMED1 ; YIPF2 ; MIR199A1 ; MIR6793 ; C19orf52 ;
ROSE Closest CARM1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR199A1 ; SMARCA4 ; MIR4748 ; C19orf52 ; MIR6793 ; CARM1 ; YIPF2 ; TMED1 ; C19orf38 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900948 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers