SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000114491
Gene: UMPS Gene type: protein_coding
Strand: + External links:
Genomic region: chr3:124730433-124749273 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_058000384 chr3:124610726-124689316 Sample_02_0580 Blood HEL_sgSIK3e4 384 30 2268 443 18 280 1256 KALRN,UMPS,MIR544B
SE_02_057600330 chr3:124610745-124689516 Sample_02_0576 Blood HEL_sgLKB1e2 330 30 2274 443 18 280 1256 KALRN,UMPS,MIR544B
SE_02_057900298 chr3:124610997-124689480 Sample_02_0579 Blood HEL_sgNeg2 298 26 2264 441 18 280 1256 KALRN,UMPS,MIR544B
SE_02_143200674 chr3:124650678-124720608 Sample_02_1432 Bone A673 STAG2 WT 674 25 1908 285 9 276 1659 KALRN,UMPS,MIR544B
SE_00_002001189 chr3:124684139-124702157 Sample_00_0020 Large intestine large-intestine_108d 1189 3 463 65 3 62 334 KALRN,UMPS
SE_02_032501138 chr3:124688794-124709099 Sample_02_0325 Liver hepatocytes_d1 1138 4 519 52 1 49 338 KALRN,UMPS
SE_01_003800436 chr3:124688809-124702478 Sample_01_0038 Liver HepG2 436 2 360 38 1 49 338 KALRN,UMPS
SE_02_047600861 chr3:124689168-124707538 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 861 9 473 45 1 48 338 KALRN,UMPS,MIR544B
SE_02_143300885 chr3:124689183-124716710 Sample_02_1433 Bone A673 STAG2 null 885 13 681 69 1 59 394 KALRN,UMPS,MIR544B
SE_02_148600396 chr3:124692231-124714109 Sample_02_1486 Bone SK-N-MC 396 10 519 54 1 53 394 KALRN,UMPS,MIR544B
SE_02_148300274 chr3:124698546-124715624 Sample_02_1483 Bone RD-ES 274 8 400 39 0 37 166 KALRN,UMPS,MIR544B
SE_02_148400085 chr3:124699066-124714751 Sample_02_1484 Bone Rh1 85 9 372 37 0 35 166 KALRN,UMPS,MIR544B
SE_02_147700490 chr3:124699493-124714847 Sample_02_1477 Bone EW-22 490 5 357 36 0 33 166 KALRN,UMPS,MIR544B
SE_02_001200439 chr3:124699951-124708378 Sample_02_0012 Kidney 786-O_non-targeting 439 4 200 17 0 15 75 KALRN,UMPS
SE_02_028400508 chr3:124729463-124814167 Sample_02_0284 Pelvis patient 119 508 12 2480 339 12 175 2470 ITGB5,UMPS
SE_02_022800468 chr3:124729677-124762091 Sample_02_0228 Oesophagus KYSE510 468 6 1023 173 5 59 1214 UMPS
SE_02_032800528 chr3:124748204-124777896 Sample_02_0328 Embryo H9_naive 528 3 1006 167 1 46 1212 ITGB5,UMPS
SE_02_003801291 chr3:124748241-124789481 Sample_02_0038 Embryo DE 1291 12 1311 205 4 66 1206 ITGB5,UMPS
SE_02_054100209 chr3:124749875-124790696 Sample_02_0541 Brain Kelly_NaiveJQ1 209 13 1272 200 4 66 1034 ITGB5,UMPS,MIR544B
SE_02_044500659 chr3:124749886-124861293 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 659 39 3142 361 14 202 1779 ITGB5,UMPS,MIR544B
SE_02_054300174 chr3:124749982-124815909 Sample_02_0543 Brain Kelly_vehicle 174 16 1965 252 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_127300517 chr3:124750419-124814196 Sample_02_1273 Cervix HeLa 517 9 1900 252 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_043800198 chr3:124750712-124814075 Sample_02_0438 Bone HOS 198 22 1890 249 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_055900733 chr3:124755762-124781734 Sample_02_0559 iPSCs FX52 iPSCs dC-T 733 6 853 131 3 60 1034 ITGB5,UMPS,MIR544B
SE_02_101500710 chr3:124757026-124813189 Sample_02_1015 Embryo H9_ Undifferentiated 710 11 1614 194 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_044100036 chr3:124757388-124794753 Sample_02_0441 Bone M112 36 19 1060 148 4 75 1034 ITGB5,UMPS,MIR544B
SE_02_141300683 chr3:124758401-124793524 Sample_02_1413 Muscle RH4_sgBRG1 683 16 997 137 4 75 1034 ITGB5,UMPS,MIR544B
SE_02_074000335 chr3:124758653-124819451 Sample_02_0740 Muscle RH3 335 13 1716 190 7 123 1325 ITGB5,UMPS,MIR544B
SE_02_037000177 chr3:124758872-124819743 Sample_02_0370 Skeletal muscle RH4 177 8 1713 189 7 123 1350 ITGB5,UMPS
SE_01_006300017 chr3:124759091-124861471 Sample_01_0063 Skeletal muscle skeletal-muscle-myoblast 17 19 2786 289 14 202 1779 ITGB5,UMPS
SE_02_036400337 chr3:124759170-124852649 Sample_02_0364 Skeletal muscle CTR 337 15 2553 260 11 190 1678 ITGB5,UMPS
SE_02_074100415 chr3:124759221-124793738 Sample_02_0741 Muscle RH30 415 6 975 134 4 75 1034 ITGB5,UMPS,MIR544B
SE_02_038000191 chr3:124759222-124818916 Sample_02_0380 Skeletal muscle RH18 191 14 1684 187 7 123 1325 ITGB5,UMPS
SE_02_061100134 chr3:124759252-124852481 Sample_02_0611 Liposarcoma DDLPS_T1 134 52 2543 258 11 189 1678 ITGB5,UMPS,MIR544B
SE_02_107800215 chr3:124759270-124785119 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 215 11 793 112 4 64 1034 ITGB5,UMPS,MIR544B
SE_02_026500507 chr3:124759284-124794311 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 507 6 986 137 4 75 1034 ITGB5,UMPS
SE_01_011500034 chr3:124759560-124861430 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 34 32 2772 288 14 202 1779 ITGB5,UMPS,MIR544B
SE_02_141600064 chr3:124759565-124862294 Sample_02_1416 Brain SF9402 64 19 2795 290 14 202 1779 ITGB5,UMPS,MIR544B
SE_02_044600092 chr3:124759656-124902007 Sample_02_0446 Bone osteosarcoma tumor P2 92 61 3850 381 21 267 2071 ITGB5,UMPS,MIR544B,MUC13
SE_02_088601221 chr3:124759738-124795009 Sample_02_0886 Skin foreskin_ p63KLF4 1221 10 990 141 4 75 1034 ITGB5,UMPS,MIR544B
SE_02_056900152 chr3:124759753-124862046 Sample_02_0569 Periodontal ligament mesenchymal stem cell 152 47 2779 289 14 202 1779 ITGB5,UMPS,MIR544B
SE_02_086700039 chr3:124759831-124885193 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 39 91 3427 358 19 240 1839 ITGB5,UMPS,MIR544B,MUC13
SE_02_142700027 chr3:124759831-124887877 Sample_02_1427 Shoulder fibroblast_343 27 54 3499 362 20 261 2071 ITGB5,UMPS,MIR544B,MUC13
SE_02_142600019 chr3:124759838-124901434 Sample_02_1426 Shoulder fibroblast_341 19 51 3823 381 21 267 2071 ITGB5,UMPS,MIR544B,MUC13
SE_02_137600144 chr3:124759904-124862190 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 144 51 2775 288 14 202 1779 ITGB5,UMPS,MIR544B
SE_02_107900405 chr3:124759906-124793303 Sample_02_1079 Muscle RMS246_PAX3-NCOA1 405 9 941 132 4 75 1034 ITGB5,UMPS,MIR544B
SE_02_148300367 chr3:124759970-124812609 Sample_02_1483 Bone RD-ES 367 12 1490 175 7 115 1256 ITGB5,UMPS,MIR544B
SE_02_114500565 chr3:124759983-124803810 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 565 18 1250 163 6 97 1187 ITGB5,UMPS,MIR544B
SE_02_127900074 chr3:124760038-124887936 Sample_02_1279 Bone Mesenchymal stem cells 74 28 3493 360 20 261 2071 ITGB5,UMPS,MIR544B,MUC13
SE_01_005600417 chr3:124760071-124794616 Sample_01_0056 Bone osteoblast 417 7 966 135 4 75 1034 ITGB5,UMPS
SE_02_138000048 chr3:124760084-124861406 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 48 53 2754 285 14 202 1779 ITGB5,UMPS,MIR544B
SE_02_156600517 chr3:124760107-124794818 Sample_02_1566 Dermal Dermal fibroblast 517 9 972 138 4 75 1034 ITGB5,UMPS,MIR544B
SE_02_110700323 chr3:124760135-124816401 Sample_02_1107 Brain SK-N-AS 323 38 1587 177 7 118 1256 ITGB5,UMPS,MIR544B
SE_03_000500045 chr3:124760156-124902177 Sample_03_0005 Lung A549_dexamethasone_0.5h 45 14 3834 376 21 267 2071 ITGB5,UMPS,MUC13
SE_02_044700503 chr3:124760169-124802625 Sample_02_0447 Lung lung metastasis from primary osteosarcoma tumor M2 503 18 1205 155 6 95 1187 ITGB5,UMPS,MIR544B
SE_01_007000041 chr3:124760348-124901948 Sample_01_0070 Ascending aorta ascending-aorta 41 14 3824 376 21 267 2071 ITGB5,UMPS,MUC13
SE_03_000800071 chr3:124760454-124902248 Sample_03_0008 Lung A549_dexamethasone_7h 71 13 3821 374 21 267 2071 ITGB5,UMPS,MUC13
SE_02_137400105 chr3:124760473-124862010 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 105 65 2746 282 14 202 1779 ITGB5,UMPS,MIR544B
SE_02_116200349 chr3:124760544-124813985 Sample_02_1162 Stomach YCC11 349 22 1498 171 7 118 1256 ITGB5,UMPS,MIR544B
SE_01_000600080 chr3:124760552-124901938 Sample_01_0006 Lung A549_ethanol_1h 80 17 3814 374 21 267 2071 ITGB5,UMPS,MUC13
SE_01_008600053 chr3:124760616-124902009 Sample_01_0086 Thoracic aorta thoracic-aorta 53 11 3813 374 21 267 2071 ITGB5,UMPS,MUC13
SE_01_008100394 chr3:124760671-124815137 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 394 7 1531 172 7 118 1256 ITGB5,UMPS
SE_02_053400050 chr3:124760734-124860210 Sample_02_0534 Blood vessel Circle of Willis_60y 50 43 2703 277 14 200 1779 ITGB5,UMPS,MIR544B
SE_02_031100416 chr3:124760783-124814411 Sample_02_0311 Neuroblastoma SK-N-AS 416 7 1503 170 7 118 1256 ITGB5,UMPS
SE_02_047400181 chr3:124760796-124861906 Sample_02_0474 Fibroblast umbilical cord Fibroblast 181 25 2735 280 14 202 1779 ITGB5,UMPS,MIR544B
SE_01_009300033 chr3:124760844-124901455 Sample_01_0093 Aorta ascending aorta 33 44 3785 372 21 267 2071 ITGB5,UMPS,MIR544B,MUC13
SE_02_132800376 chr3:124760850-124813799 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 376 12 1484 168 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_088800193 chr3:124760894-124861987 Sample_02_0888 Heart left ventricle_LV1160 193 37 2734 280 14 202 1779 ITGB5,UMPS,MIR544B,MUC13
SE_02_096700251 chr3:124760913-124813973 Sample_02_0967 Brain H3.3K27M_JN57 251 17 1487 169 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_089700417 chr3:124760918-124814269 Sample_02_0897 Heart left ventricle_LV1325 417 13 1494 170 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_142800248 chr3:124760932-124814166 Sample_02_1428 Shoulder fibroblast_316 248 13 1492 170 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_090600113 chr3:124760933-124862342 Sample_02_0906 Heart left ventricle_DCM_LV1072 113 30 2744 281 14 202 1779 ITGB5,UMPS,MIR544B
SE_01_011000039 chr3:124760933-124901389 Sample_01_0110 Aorta thoracic aorta_37y 39 73 3781 372 21 267 2071 ITGB5,UMPS,MIR544B,MUC13
SE_02_137500081 chr3:124760941-124884877 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 81 65 3374 346 19 240 1839 ITGB5,UMPS,MIR544B,MUC13
SE_02_090200159 chr3:124760961-124862092 Sample_02_0902 Heart left ventricle_LV1558 159 36 2735 280 14 202 1779 ITGB5,UMPS,MIR544B,MUC13
SE_02_058600397 chr3:124760982-124794075 Sample_02_0586 Chordal patient-derived chordoma MGH_4 397 12 923 127 4 75 1034 ITGB5,UMPS,MIR544B
SE_02_053300111 chr3:124761027-124863848 Sample_02_0533 Blood vessel Circle of Willis_54y 111 44 2788 283 14 202 1779 ITGB5,UMPS,MIR544B
SE_02_108200485 chr3:124761043-124803034 Sample_02_1082 Retina retina 485 18 1185 154 6 95 1187 ITGB5,UMPS,MIR544B
SE_02_088900257 chr3:124761055-124862304 Sample_02_0889 Heart left ventricle_LV1183 257 27 2740 281 14 202 1779 ITGB5,UMPS,MIR544B,MUC13
SE_02_108300371 chr3:124761075-124813720 Sample_02_1083 Macula macula 371 15 1474 168 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_088700596 chr3:124761086-124814020 Sample_02_0887 Heart left ventricle_LV1121 596 13 1480 169 7 118 1256 ITGB5,UMPS,MIR544B
SE_01_007800330 chr3:124761093-124862414 Sample_01_0078 Heart left ventricle heart-left-ventricle 330 15 2740 281 14 202 1779 ITGB5,UMPS
SE_01_009800224 chr3:124761106-124861385 Sample_01_0098 Heart left ventricle_51y 224 23 2714 279 14 202 1779 ITGB5,UMPS,MIR544B,MUC13
SE_01_007300045 chr3:124761110-124901709 Sample_01_0073 Coronary artery coronary-artery 45 20 3787 372 21 267 2071 ITGB5,UMPS,MUC13
SE_01_007400633 chr3:124761113-124861715 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 633 16 2721 280 14 202 1779 ITGB5,UMPS
SE_01_008200116 chr3:124761120-124885273 Sample_01_0082 Right lobe of liver right-lobe-of-liver 116 21 3382 349 19 240 1839 ITGB5,UMPS,MUC13
SE_01_007700544 chr3:124761138-124862314 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 544 18 2737 281 14 202 1779 ITGB5,UMPS
SE_02_009500449 chr3:124761155-124788022 Sample_02_0095 Mammary gland MDA-MB-468 449 5 789 110 4 66 1034 ITGB5,UMPS
SE_01_009200348 chr3:124761156-124861316 Sample_01_0092 Vagina vagina 348 18 2711 279 14 202 1779 ITGB5,UMPS
SE_02_042100354 chr3:124761263-124802408 Sample_02_0421 Brain BE2C_3 354 9 1158 148 6 95 1187 ITGB5,UMPS
SE_02_098900931 chr3:124761278-124815861 Sample_02_0989 Kidney kidney cortex_WT 931 15 1531 170 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_155300652 chr3:124761334-124813866 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 652 17 1471 168 7 118 1256 ITGB5,UMPS,MIR544B
SE_02_014600360 chr3:124761408-124794688 Sample_02_0146 Bone marrow LP-1_SGC-CBP30 360 7 920 129 4 75 1034 ITGB5,UMPS
SE_02_089000347 chr3:124761421-124813860 Sample_02_0890 Heart left ventricle_LV1200 347 16 1467 168 7 117 1256 ITGB5,UMPS,MIR544B
SE_02_120301124 chr3:124761429-124818962 Sample_02_1203 Brain NB1 1124 12 1610 178 7 122 1325 ITGB5,UMPS,MIR544B
SE_02_090300134 chr3:124761444-124862093 Sample_02_0903 Heart left ventricle_DCM_LV1009 134 29 2719 280 14 201 1779 ITGB5,UMPS,MIR544B
SE_02_119900149 chr3:124761453-124862726 Sample_02_1199 Brain GBM35 149 31 2740 281 14 201 1779 ITGB5,UMPS,MIR544B
SE_02_078000116 chr3:124761457-124901484 Sample_02_0780 Liver SMMC-7721 116 48 3765 372 21 266 2071 ITGB5,UMPS,MIR544B,MUC13
SE_02_150301357 chr3:124761460-124787443 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 1357 6 772 110 4 65 1034 ITGB5,UMPS,MIR544B
SE_02_059400207 chr3:124761468-124862476 Sample_02_0594 iPSC-derived neural progenitors 207 24 2729 281 14 201 1779 ITGB5,UMPS,MIR544B
SE_02_091800274 chr3:124761469-124814006 Sample_02_0918 Heart left ventricle_DCM_LV1437 274 20 1468 169 7 117 1256 ITGB5,UMPS,MIR544B
SE_02_119500523 chr3:124761473-124846458 Sample_02_1195 Brain GBM29 523 27 2298 238 11 182 1583 ITGB5,UMPS,MIR544B
SE_01_011100080 chr3:124761478-124863267 Sample_01_0111 Brain SK-N-SH 80 41 2751 281 14 200 1779 ITGB5,UMPS,MIR544B
SE_02_089200261 chr3:124761479-124863249 Sample_02_0892 Heart left ventricle_LV1215 261 33 2751 281 14 200 1779 ITGB5,UMPS,MIR544B,MUC13
SE_02_090500138 chr3:124761482-124862286 Sample_02_0905 Heart left ventricle_DCM_LV1033 138 28 2725 281 14 200 1779 ITGB5,UMPS,MIR544B
SE_02_086800408 chr3:124761483-124794292 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 408 22 908 127 4 73 1034 ITGB5,UMPS,MIR544B
SE_02_121900344 chr3:124761489-124792626 Sample_02_1219 Bone marrow H929 344 9 876 124 4 73 1034 ITGB5,UMPS,MIR544B
SE_02_090400891 chr3:124761494-124814123 Sample_02_0904 Heart left ventricle_DCM_LV1028 891 14 1470 170 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_122000536 chr3:124761497-124813823 Sample_02_1220 Bone marrow JJN3 536 17 1463 168 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_150200809 chr3:124761498-124787793 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 809 13 775 110 4 64 1034 ITGB5,UMPS,MIR544B
SE_02_125000187 chr3:124761498-124789059 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 187 7 803 111 4 64 1034 ITGB5,UMPS,MIR544B
SE_01_008800700 chr3:124761498-124846584 Sample_01_0088 Tibial nerve tibial-nerve 700 17 2301 238 11 181 1583 ITGB5,UMPS
SE_02_089600459 chr3:124761500-124814192 Sample_02_0896 Heart left ventricle_LV1294 459 17 1475 170 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_124900210 chr3:124761505-124788790 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 210 10 800 111 4 64 1034 ITGB5,UMPS,MIR544B
SE_02_089800350 chr3:124761521-124861451 Sample_02_0898 Heart left ventricle_LV1356 350 30 2703 279 14 200 1779 ITGB5,UMPS,MIR544B,MUC13
SE_02_092100454 chr3:124761523-124813440 Sample_02_0921 Heart embryonic heart_CS22 454 16 1456 168 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_131000014 chr3:124761531-124887902 Sample_02_1310 Bone marrow ASMSCs 14 17 3439 353 20 259 2071 ITGB5,UMPS,MIR544B,MUC13
SE_00_004600456 chr3:124761533-124814007 Sample_00_0046 Heart right ventricle_34y 456 19 1468 169 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_089100245 chr3:124761537-124861306 Sample_02_0891 Heart left ventricle_LV1202 245 26 2700 279 14 200 1779 ITGB5,UMPS,MIR544B,MUC13
SE_02_089300609 chr3:124761545-124814048 Sample_02_0893 Heart left ventricle_LV1226 609 14 1468 169 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_091700076 chr3:124761548-124863498 Sample_02_0917 Heart left ventricle_DCM_LV1433 76 33 2760 282 14 200 1779 ITGB5,UMPS,MIR544B
SE_02_131100514 chr3:124761550-124793849 Sample_02_1311 Bone marrow HDMSCs 514 8 901 125 4 73 1034 ITGB5,UMPS,MIR544B
SE_02_090700197 chr3:124761558-124862140 Sample_02_0907 Heart left ventricle_DCM_LV1223 197 31 2719 280 14 200 1779 ITGB5,UMPS,MIR544B
SE_02_091300163 chr3:124761574-124862235 Sample_02_0913 Heart left ventricle_DCM_LV1304 163 27 2721 280 14 200 1779 ITGB5,UMPS,MIR544B
SE_02_090100722 chr3:124761577-124813998 Sample_02_0901 Heart left ventricle_LV1471 722 18 1466 168 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_090000157 chr3:124761580-124861458 Sample_02_0900 Heart left ventricle_LV1452 157 33 2701 278 14 200 1779 ITGB5,UMPS,MIR544B,MUC13
SE_02_142500135 chr3:124761587-124814004 Sample_02_1425 Shoulder fibroblast_384 135 15 1465 167 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_046600100 chr3:124761594-124885234 Sample_02_0466 Adipose visceral adipocytes 100 80 3366 347 19 238 1839 ITGB5,UMPS,MIR544B,MUC13
SE_02_048100298 chr3:124761600-124862558 Sample_02_0481 Mammary gland MDA-MB231 298 28 2730 279 14 200 1779 ITGB5,UMPS,MIR544B
SE_02_126400498 chr3:124761605-124814172 Sample_02_1264 Bone Im-GCT-4072_G34W KO 498 13 1472 168 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_091000244 chr3:124761616-124863330 Sample_02_0910 Heart left ventricle_DCM_LV1275 244 38 2749 279 14 200 1779 ITGB5,UMPS,MIR544B
SE_00_005200425 chr3:124761633-124814027 Sample_00_0052 Heart left ventricle 3y 425 21 1462 167 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_091100122 chr3:124761636-124862061 Sample_02_0911 Heart left ventricle_DCM_LV1290 122 41 2710 278 14 200 1779 ITGB5,UMPS,MIR544B
SE_02_137700987 chr3:124761647-124793626 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 987 15 888 123 4 73 1034 ITGB5,UMPS,MIR544B
SE_02_089400494 chr3:124761653-124814021 Sample_02_0894 Heart left ventricle_LV1248 494 10 1462 167 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_090900122 chr3:124761705-124862222 Sample_02_0909 Heart left ventricle_DCM_LV1264 122 37 2714 279 14 200 1779 ITGB5,UMPS,MIR544B
SE_02_091200218 chr3:124761709-124861488 Sample_02_0912 Heart left ventricle_DCM_LV1300 218 29 2696 277 14 200 1779 ITGB5,UMPS,MIR544B
SE_02_091600377 chr3:124761763-124813923 Sample_02_0916 Heart left ventricle_DCM_LV1392 377 14 1458 166 7 116 1256 ITGB5,UMPS,MIR544B
SE_02_111000235 chr3:124761865-124812676 Sample_02_1110 Other HGrC1 235 15 1427 165 7 113 1256 ITGB5,UMPS,MIR544B
SE_02_089500110 chr3:124762119-124846350 Sample_02_0895 Heart left ventricle_LV1259 110 23 2268 232 11 181 1583 ITGB5,UMPS,MIR544B
SE_02_125200203 chr3:124762154-124791687 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 203 12 828 115 4 66 1034 ITGB5,UMPS,MIR544B
SE_02_154300422 chr3:124762220-124787533 Sample_02_1543 Gastrointestinal Stromal GIST-48 422 10 741 103 4 64 1034 ITGB5,UMPS,MIR544B
SE_02_090800077 chr3:124762250-124901443 Sample_02_0908 Heart left ventricle_DCM_LV1262 77 49 3730 365 21 265 2071 ITGB5,UMPS,MIR544B,MUC13
SE_00_005300164 chr3:124762338-124790534 Sample_00_0053 Embryo trophoblast cell originated from H1 164 17 790 111 4 64 1034 ITGB5,UMPS,MIR544B
SE_02_152700048 chr3:124762645-124803806 Sample_02_1527 Embryo naive embryonic stem cell 48 23 1157 148 6 95 1187 ITGB5,UMPS,MIR544B
SE_02_101400295 chr3:124763364-124775169 Sample_02_1014 Brain Lateral temporal lobe_7T_AD 295 3 372 53 1 37 730 ITGB5,UMPS,MIR544B
SE_02_021600926 chr3:124763364-124797197 Sample_02_0216 Skin NHEK_scramble 926 6 938 127 6 83 1110 ITGB5,UMPS
SE_02_043900122 chr3:124763794-124794125 Sample_02_0439 Bone Hu09 122 13 826 113 4 68 888 ITGB5,UMPS,MIR544B
SE_02_119101010 chr3:124765382-124846332 Sample_02_1191 Brain GBM25 1010 18 2154 212 11 168 1336 ITGB5,UMPS,MIR544B
SE_02_037200562 chr3:124766218-124782807 Sample_02_0372 Skeletal muscle RMS008 562 3 490 68 4 45 759 ITGB5,UMPS
SE_02_108000204 chr3:124767130-124846380 Sample_02_1080 Muscle JR1 shCtrl 204 29 2103 205 11 165 1250 ITGB5,UMPS,MIR544B
SE_02_125100181 chr3:124767245-124791533 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 181 10 658 87 4 48 701 ITGB5,UMPS,MIR544B
SE_02_007500207 chr3:124768250-124781580 Sample_02_0075 Autonomic ganglia kelly_DMSO_3h 207 3 395 52 1 42 701 ITGB5,UMPS
SE_02_150000571 chr3:124768477-124781601 Sample_02_1500 Brain KELLY_untreat 571 7 382 50 1 42 701 ITGB5,UMPS,MIR544B
SE_02_038100512 chr3:124768660-124803422 Sample_02_0381 Heart purified cardiomyocyte WT 512 4 934 113 5 77 854 ITGB5,UMPS
SE_02_017700259 chr3:124768780-124815585 Sample_02_0177 Urinary bladder J82 259 4 1260 127 6 100 923 ITGB5,UMPS
SE_02_092400326 chr3:124769152-124813989 Sample_02_0924 Heart fetal heart_PCW10_12569 326 20 1203 124 6 95 859 ITGB5,UMPS,MIR544B
SE_02_074501088 chr3:124769168-124801806 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 1088 6 867 101 5 72 787 ITGB5,UMPS,MIR544B
SE_02_092500392 chr3:124769175-124813766 Sample_02_0925 Heart fetal heart_PCW17_12570 392 14 1198 123 6 95 853 ITGB5,UMPS,MIR544B
SE_02_036900707 chr3:124769460-124819538 Sample_02_0369 Skeletal muscle RD 707 6 1347 132 6 100 903 ITGB5,UMPS
SE_02_037900708 chr3:124769460-124819538 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 708 6 1347 132 6 100 903 ITGB5,UMPS
SE_01_004200017 chr3:124769636-124800995 Sample_01_0042 Haematopoietic and lymphoid tissue KMS-11 17 4 829 99 5 70 765 ITGB5,UMPS
SE_02_122100568 chr3:124769880-124793571 Sample_02_1221 Bone marrow KMS11 568 12 608 76 3 52 612 ITGB5,UMPS,MIR544B
SE_02_092200387 chr3:124769993-124814075 Sample_02_0922 Heart fetal heart_PCW10_12434 387 13 1182 121 6 95 834 ITGB5,UMPS,MIR544B
SE_02_144500222 chr3:124770068-124888009 Sample_02_1445 Adipose SW872_TAZ4SA 222 34 3156 305 19 238 1649 ITGB5,UMPS,MIR544B,MUC13
SE_02_126500050 chr3:124770116-124862203 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 50 16 2431 232 13 179 1357 ITGB5,UMPS,MIR544B
SE_02_091900172 chr3:124770122-124846295 Sample_02_0919 Heart left ventricle_DCM_LV1532 172 26 2004 189 10 159 1161 ITGB5,UMPS,MIR544B
SE_02_126600090 chr3:124770190-124861463 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 90 20 2413 230 13 179 1357 ITGB5,UMPS,MIR544B
SE_01_003700134 chr3:124770209-124861427 Sample_01_0037 Liver hepatocyte 134 13 2412 230 13 179 1357 ITGB5,UMPS
SE_01_006600069 chr3:124770225-124861510 Sample_01_0066 Smooth muscle smooth-muscle-cell 69 16 2413 230 13 179 1357 ITGB5,UMPS
SE_02_084000731 chr3:124770227-124819556 Sample_02_0840 Embryo hNPCs_R1159Q/+ 731 12 1328 130 6 100 903 ITGB5,UMPS,MIR544B
SE_02_092300432 chr3:124770237-124813829 Sample_02_0923 Heart fetal heart_PCW10_12522 432 16 1171 119 6 95 834 ITGB5,UMPS,MIR544B
SE_02_061300077 chr3:124770299-124863762 Sample_02_0613 Liposarcoma MLPS_T1 77 51 2473 234 13 179 1357 ITGB5,UMPS,MIR544B
SE_01_007200332 chr3:124770451-124862540 Sample_01_0072 Breast epithelium breast-epithelium 332 21 2433 232 13 179 1357 ITGB5,UMPS
SE_02_008800462 chr3:124770459-124813654 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 462 11 1161 119 6 95 834 ITGB5,UMPS
SE_02_101600015 chr3:124770463-124912324 Sample_02_1016 Embryo H9_Mesendoderm_24h 15 30 3761 339 20 253 2023 MUC13,ITGB5,UMPS,MIR544B
SE_02_008900496 chr3:124770504-124793753 Sample_02_0089 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3 496 6 598 76 3 52 612 ITGB5,UMPS
SE_02_089900608 chr3:124770613-124813918 Sample_02_0899 Heart left ventricle_LV1400 608 13 1160 119 6 95 834 ITGB5,UMPS,MIR544B
SE_02_141500619 chr3:124770734-124793213 Sample_02_1415 Brain DIPGIV 619 8 579 76 3 52 612 ITGB5,UMPS,MIR544B
SE_02_024300095 chr3:124770809-124861965 Sample_02_0243 Foreskin foreskin_HFFs 95 15 2408 231 13 179 1357 ITGB5,UMPS
SE_01_006400205 chr3:124770844-124813539 Sample_01_0064 Brain: derived from metastatic site: supra-orbital area SK-N-MC 205 6 1154 119 6 95 834 ITGB5,UMPS
SE_00_002100492 chr3:124770923-124814164 Sample_00_0021 Lung lung_3y 492 6 1166 121 6 91 834 ITGB5,UMPS
SE_02_091500090 chr3:124771024-124861422 Sample_02_0915 Heart left ventricle_DCM_LV1371 90 34 2391 230 13 175 1357 ITGB5,UMPS,MIR544B
SE_02_092000133 chr3:124771037-124862313 Sample_02_0920 Heart left ventricle_DCM_LV1535 133 33 2414 232 13 175 1357 ITGB5,UMPS,MIR544B
SE_02_124100404 chr3:124771095-124813696 Sample_02_1241 Skin MCC26_virus_negative 404 13 1148 118 6 91 834 ITGB5,UMPS,MIR544B
SE_02_118600282 chr3:124771136-124861369 Sample_02_1186 Brain GBM15 282 28 2385 229 13 175 1357 ITGB5,UMPS,MIR544B
SE_02_091400121 chr3:124771197-124861278 Sample_02_0914 Heart left ventricle_DCM_LV1342 121 26 2381 229 13 174 1357 ITGB5,UMPS,MIR544B
SE_02_148600118 chr3:124771218-124813115 Sample_02_1486 Bone SK-N-MC 118 12 1131 118 6 90 834 ITGB5,UMPS,MIR544B
SE_02_143600423 chr3:124771228-124863814 Sample_02_1436 Liver LSEC-Ctrl 423 30 2454 233 13 174 1357 ITGB5,UMPS,MIR544B
SE_02_126900653 chr3:124771420-124792788 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 653 4 549 70 3 47 612 ITGB5,UMPS,MIR544B
SE_02_103500171 chr3:124771458-124901440 Sample_02_1035 Mammary gland HCC70_Vehicle 171 45 3435 318 20 239 1649 ITGB5,UMPS,MIR544B,MUC13
SE_00_002300509 chr3:124771685-124814034 Sample_00_0023 Embryo mesenchymal-stem-cell 509 7 1136 115 6 90 834 ITGB5,UMPS
SE_02_113300964 chr3:124771695-124813617 Sample_02_1133 Liver Hepatic stellate cells 964 7 1129 114 6 90 834 ITGB5,UMPS,MIR544B
SE_02_009100535 chr3:124771717-124793889 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 535 5 567 71 3 47 612 ITGB5,UMPS
SE_00_003400445 chr3:124771728-124814113 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 445 7 1135 115 6 90 834 ITGB5,UMPS
SE_01_001900187 chr3:124771764-124861520 Sample_01_0019 Brain and spinal cord astrocyte 187 15 2367 224 13 174 1357 ITGB5,UMPS
SE_02_070100582 chr3:124771813-124782543 Sample_02_0701 Bone David_TC32 582 8 310 41 3 32 612 ITGB5,UMPS,MIR544B
SE_02_157100132 chr3:124771817-124886330 Sample_02_1571 Fibroblast Fibroblast cells 132 26 3060 296 19 221 1417 ITGB5,UMPS,MIR544B,MUC13
SE_02_063800297 chr3:124771818-124861484 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 297 30 2364 224 13 174 1357 ITGB5,UMPS,MIR544B
SE_02_044000074 chr3:124771851-124814043 Sample_02_0440 Bone LM7 74 14 1127 114 6 90 834 ITGB5,UMPS,MIR544B
SE_02_112900420 chr3:124771918-124815030 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 420 13 1154 115 6 90 834 ITGB5,UMPS,MIR544B
SE_02_023000281 chr3:124771955-124792560 Sample_02_0230 Umbilical cord ID60 281 5 530 69 3 47 612 ITGB5,UMPS
SE_02_112800291 chr3:124771980-124813878 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 291 16 1119 113 6 90 834 ITGB5,UMPS,MIR544B
SE_00_005700387 chr3:124772032-124813836 Sample_00_0057 Heart right ventricle 3y 387 24 1117 113 6 90 834 ITGB5,UMPS,MIR544B
SE_02_083900424 chr3:124772181-124814149 Sample_02_0839 Embryo hNPCs_K755R/+ 424 10 1120 114 6 90 834 ITGB5,UMPS,MIR544B
SE_02_084900472 chr3:124772315-124793615 Sample_02_0849 iPSCs iPSC_CBP-30 472 7 539 69 3 45 612 ITGB5,UMPS,MIR544B
SE_02_044200124 chr3:124773931-124887908 Sample_02_0442 Bone MG63.3 124 71 3041 293 19 217 1473 ITGB5,UMPS,MIR544B,MUC13
SE_00_000400308 chr3:124775787-124793196 Sample_00_0004 Aorta aorta 308 8 423 55 3 31 167 ITGB5,UMPS
SE_02_095100465 chr3:124775798-124794605 Sample_02_0951 HMSCs hMSCs 465 15 452 59 3 31 167 ITGB5,UMPS,MIR544B
SE_02_131600544 chr3:124779887-124795749 Sample_02_1316 Brain hMGLs_TREM2-R47H 544 13 380 49 3 26 0 ITGB5,UMPS,MIR544B
SE_02_018300063 chr3:124780037-124861633 Sample_02_0183 Skin SKMEL2 63 15 2134 192 13 153 745 ITGB5,UMPS
SE_02_131700408 chr3:124780240-124795732 Sample_02_1317 Brain hMGLs_SORL1-KO 408 12 362 48 3 26 0 ITGB5,UMPS,MIR544B
Genomic distribution of SEs associated with UMPS
Genome Browser

The strength of the tissue affected by the gene

Expression of UMPS

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)