SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_031100416
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr3:124760783-124814411
Size: 53628
Super-enhancer rank 416
Number of SE elements: 7
ChIP density(Case|Control): 33013.3968|6344.1924
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UMPS ;
ROSE Overlap ITGB5 ;
ROSE Proximal UMPS ;
ROSE Closest UMPS ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR544B ; UMPS ; ITGB5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100416 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers