SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_048100298
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MDA-MB231
Genomic region: chr3:124761600-124862558
Size: 100958
Super-enhancer rank 298
Number of SE elements: 28
ChIP density(Case|Control): 41594.696|7450.7004
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ITGB5;
ROSE Overlap ITGB5;
ROSE Proximal UMPS; MIR544B;
ROSE Closest ITGB5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_048100298 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers