Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000146833
Gene: TRIM4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr7:99876958-99919531 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103601681 chr7:99909670-99924586 Sample_02_1036 Mammary gland HCC70_XY018 1681 8 376 39 1 0 425 GJC3,TRIM4,OR2AE1
SE_02_003600748 chr7:99929084-99946702 Sample_02_0036 Embryo H7 748 4 413 42 3 0 134 GJC3,AZGP1P1,TRIM4,AZGP1
SE_02_103501197 chr7:99940065-99974603 Sample_02_1035 Mammary gland HCC70_Vehicle 1197 22 946 102 3 0 391 AZGP1,TRIM4,GJC3,AZGP1P1,ZKSCAN1
SE_02_074800159 chr7:99941476-99977592 Sample_02_0748 Mammary gland HCC1599_WO 159 8 1010 102 3 0 500 AZGP1,TRIM4,GJC3,AZGP1P1,ZKSCAN1
SE_02_074900166 chr7:99941521-99977323 Sample_02_0749 Mammary gland HCC1599_GSI 166 7 1006 102 3 0 500 AZGP1,TRIM4,GJC3,AZGP1P1,ZKSCAN1
SE_02_009500474 chr7:99941747-99957500 Sample_02_0095 Mammary gland MDA-MB-468 474 5 396 57 1 0 0 AZGP1P1,TRIM4,GJC3,AZGP1
SE_02_117200527 chr7:99942084-99946674 Sample_02_1172 Embryo H9 WT 527 1 116 11 1 0 0 TRIM4,GJC3,AZGP1P1,AZGP1,OR2AE1
SE_02_067800551 chr7:99942523-99946580 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 551 4 107 10 1 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_02_068700917 chr7:99942525-99963760 Sample_02_0687 Lung NCI-H146_no infection 917 3 580 69 2 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_02_157200501 chr7:99942599-99946559 Sample_02_1572 iPSCs FiPSC 501 1 106 10 1 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_02_157000513 chr7:99942636-99946474 Sample_02_1570 iPSCs EiPSC 513 1 103 10 1 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_02_069700338 chr7:99942764-99954739 Sample_02_0697 Lung NCI-H1048-cas9_sgHROSA 338 7 293 47 1 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_02_068500248 chr7:99942797-99954394 Sample_02_0685 Lung NCI-H1048_no infection 248 4 284 46 1 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_02_069800437 chr7:99942811-99954384 Sample_02_0698 Lung NCI-H1048-cas9_sgPOU2F3 437 7 284 46 1 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_02_156700706 chr7:99942825-99946495 Sample_02_1567 iPSCs CiPSC 706 2 99 9 1 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_02_004200353 chr7:99942981-99946663 Sample_02_0042 Embryo endodermal CyT49_ES_D0 353 1 97 9 1 0 0 AZGP1P1,TRIM4,GJC3,AZGP1
SE_01_003300331 chr7:99943054-99946028 Sample_01_0033 Embryo H9 331 1 79 9 1 0 0 AZGP1P1,TRIM4,GJC3,AZGP1
SE_01_003100355 chr7:99943090-99946036 Sample_01_0031 Skin GM23338 355 1 79 9 1 0 0 AZGP1P1,TRIM4,GJC3,AZGP1
SE_00_001200591 chr7:99943128-99945385 Sample_00_0012 Embryo H1-hESC 591 1 58 6 0 0 0 AZGP1P1,TRIM4,GJC3,AZGP1
SE_00_001300081 chr7:99943170-99945508 Sample_00_0013 Embryo H9 81 2 61 6 0 0 0 AZGP1P1,TRIM4,GJC3,AZGP1
SE_02_074200266 chr7:99943353-99946477 Sample_02_0742 Embryo ESCs_day0 266 1 86 9 1 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_01_011600104 chr7:99943594-99945349 Sample_01_0116 Embryo H1-hESC 104 3 47 5 0 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_02_070900356 chr7:99951882-99957046 Sample_02_0709 Pancreas hT85_organoid 356 1 134 20 0 0 0 TRIM4,GJC3,AZGP1P1,AZGP1
SE_02_007300012 chr7:99966680-99972162 Sample_02_0073 Other 90-8TL_DMSO 12 2 167 14 0 0 358 AZGP1,AZGP1P1,TRIM4,ZKSCAN1,GJC3
SE_02_127700200 chr7:99966747-99972056 Sample_02_1277 Prostate PC3_COMBO 200 3 162 14 0 0 328 AZGP1,TRIM4,GJC3,AZGP1P1,ZKSCAN1
SE_02_127400320 chr7:99966766-99972073 Sample_02_1274 Prostate PC3_DMSO 320 3 160 14 0 0 330 AZGP1,TRIM4,GJC3,AZGP1P1,ZKSCAN1
SE_00_001400176 chr7:99969458-100019780 Sample_00_0014 Heart left ventricle heart-left-ventricle 176 7 1398 134 8 26 1127 AZGP1P1,AZGP1,ZKSCAN1,TRIM4,ZSCAN21,GJC3

Genomic distribution of SEs associated with TRIM4

The strength of the tissue affected by the gene


Expression of TRIM4