Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000187098
Gene: MITF Gene type: protein_coding
Strand: + External links:
Genomic region: chr3:69739464-69968336 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_141000728 chr3:69647604-69691558 Sample_02_1410 Brain GSC6 728 10 1313 45 3 67 0 MITF
SE_02_040800402 chr3:69664547-69696085 Sample_02_0408 Kidney G401_Dox 402 6 915 20 0 58 0 MITF
SE_02_049300152 chr3:69665207-69691173 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 152 6 760 15 0 34 0 MITF
SE_02_004000692 chr3:69680913-69692400 Sample_02_0040 Embryo PFG 692 5 338 7 0 19 0 MITF
SE_02_075700728 chr3:69681004-69689599 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 728 3 262 5 0 13 0 MITF
SE_02_087500055 chr3:69712864-69857871 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 55 47 3898 297 7 555 299 MITF
SE_04_000100761 chr3:69715888-69744624 Sample_04_0001 Blood heat shocked K562 761 3 802 13 2 103 162 MITF
SE_02_149200040 chr3:69718038-69857891 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 40 35 3693 293 6 543 299 MITF
SE_02_090500354 chr3:69724789-69821289 Sample_02_0905 Heart left ventricle_DCM_LV1033 354 22 2445 154 5 410 299 MITF
SE_02_155401066 chr3:69738128-69751553 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 1066 7 296 16 2 117 162 MITF
SE_02_010100030 chr3:69738195-69839352 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 30 11 2616 230 5 430 299 MITF
SE_02_063200092 chr3:69739438-69823285 Sample_02_0632 Gastrointestinal Stromal GIST-48B_DMSO 92 21 2085 156 3 366 246 MITF
SE_02_063300198 chr3:69740249-69822576 Sample_02_0633 Gastrointestinal Stromal GIST-48B_Imatinib 198 26 2048 155 3 353 137 MITF
SE_02_154700045 chr3:69740505-69822262 Sample_02_1547 Gastrointestinal Stromal GIST-48B 45 35 2036 155 3 352 137 MITF
SE_02_154800103 chr3:69743576-69817461 Sample_02_1548 Gastrointestinal Stromal GIST-226 103 24 1846 129 3 308 137 MITF
SE_02_055000073 chr3:69760100-69856911 Sample_02_0550 Other Aska-BAF47KO1 shCt 73 26 2578 252 2 367 137 MITF
SE_02_055100101 chr3:69760414-69857227 Sample_02_0551 Other Aska-BAF47KO1 shSSX 101 18 2580 254 2 370 137 MITF
SE_02_044800400 chr3:69761408-69821591 Sample_02_0448 Bone MNNG 400 23 1546 121 1 258 137 MITF
SE_02_090701269 chr3:69767900-69829517 Sample_02_0907 Heart left ventricle_DCM_LV1223 1269 19 1614 155 1 183 69 MITF
SE_02_085800311 chr3:69770523-69840468 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 311 9 1908 201 2 201 0 MITF
SE_02_038200250 chr3:69836321-69889379 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 250 7 1309 71 0 246 172 MITF
SE_02_074700954 chr3:69836799-69892813 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 954 22 1364 72 0 252 172 MITF
SE_02_092100574 chr3:69854110-69893396 Sample_02_0921 Heart embryonic heart_CS22 574 12 909 18 0 182 172 MITF
SE_02_092200709 chr3:69854263-69889049 Sample_02_0922 Heart fetal heart_PCW10_12434 709 9 813 16 0 170 172 MITF
SE_02_040900250 chr3:69854538-69891760 Sample_02_0409 Kidney G401_NoDox 250 7 863 16 0 178 172 MITF
SE_02_013800030 chr3:69854733-69891949 Sample_02_0138 Brain RT172 30 3 861 15 0 178 172 MITF
SE_02_127500365 chr3:69855040-69917592 Sample_02_1275 Prostate PC3_Vorinostat 365 22 1541 21 1 234 172 MITF
SE_02_090401341 chr3:69855041-69914527 Sample_02_0904 Heart left ventricle_DCM_LV1028 1341 16 1472 20 1 234 172 MITF
SE_02_090500826 chr3:69855272-69906703 Sample_02_0905 Heart left ventricle_DCM_LV1033 826 15 1229 19 0 215 172 MITF
SE_02_090701210 chr3:69855303-69889470 Sample_02_0907 Heart left ventricle_DCM_LV1223 1210 12 801 15 0 171 172 MITF
SE_02_011400522 chr3:69855418-69892637 Sample_02_0114 Mammary gland CAL51 522 14 859 16 0 177 172 MITF
SE_02_040800194 chr3:69855500-69899733 Sample_02_0408 Kidney G401_Dox 194 7 1056 17 0 193 172 MITF
SE_02_071201244 chr3:69855539-69891637 Sample_02_0712 Pancreas BxPC3_sgNEG 1244 13 834 15 0 177 172 MITF
SE_02_091001095 chr3:69855595-69902860 Sample_02_0910 Heart left ventricle_DCM_LV1275 1095 12 1115 19 0 212 172 MITF
SE_02_152400127 chr3:69855599-69915972 Sample_02_1524 Lung H3122 DMSO 127 15 1493 21 1 234 172 MITF
SE_02_098901710 chr3:69855824-69889293 Sample_02_0989 Kidney kidney cortex_WT 1710 16 782 14 0 171 172 MITF
SE_02_049900790 chr3:69856528-69891529 Sample_02_0499 Fetal lung IMR90 IR Senescence 790 12 809 14 0 169 172 MITF
SE_02_113900937 chr3:69865874-69892047 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 937 16 604 6 0 141 172 MITF
SE_02_108500404 chr3:69873042-69891786 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 404 8 444 4 0 101 105 MITF
SE_02_093500694 chr3:69876427-69901809 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 694 8 620 6 0 124 79 MITF
SE_02_035900385 chr3:69886820-69904930 Sample_02_0359 Colon Colo741 385 2 449 5 0 92 0 MITF
SE_02_149300762 chr3:69888017-69903575 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 762 5 379 4 0 81 0 MITF
SE_02_018400439 chr3:69888076-69907927 Sample_02_0184 Skin SKMEL30 439 4 509 5 0 82 0 MITF
SE_02_018500725 chr3:69890842-69905411 Sample_02_0185 Skin UACC257 725 4 373 4 0 42 0 MITF
SE_02_018400254 chr3:69982470-70002414 Sample_02_0184 Skin SKMEL30 254 4 524 31 2 110 114 MITF

Genomic distribution of SEs associated with MITF

The strength of the tissue affected by the gene


Expression of MITF