SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000105699
Gene: LSR Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:35248330-35267964 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_155100581 chr19:35156698-35218032 Sample_02_1551 Gastrointestinal Stromal MaMel 581 23 1815 322 4 60 992 FXYD5,FXYD1,FXYD3,FAM187B,FXYD7,MIR6887,LGI4,LSR
SE_02_109900531 chr19:35196306-35226210 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 531 7 830 104 0 36 179 FAM187B,FXYD5,USF2,LSR
SE_02_045400475 chr19:35199150-35224496 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 475 8 710 97 0 34 0 FXYD5,USF2,FAM187B,LSR
SE_02_104800408 chr19:35200323-35236670 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 408 20 1050 160 5 54 381 FAM187B,FXYD5,USF2,HAMP,LSR
SE_02_012600428 chr19:35200332-35224514 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 428 3 678 95 0 35 0 FXYD5,LSR,USF2,FAM187B
SE_02_013200394 chr19:35200332-35224514 Sample_02_0132 Lung 1015_CL 394 3 678 95 0 35 0 FXYD5,LSR,USF2,FAM187B
SE_02_013100598 chr19:35200431-35217580 Sample_02_0131 Lung 1015_PT 598 2 504 67 0 30 0 FXYD5,FAM187B,LSR
SE_02_104200174 chr19:35200612-35217223 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 174 17 489 66 0 30 0 FXYD5,LSR,FAM187B
SE_02_104000223 chr19:35200721-35223027 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 223 16 634 90 0 30 0 FXYD5,USF2,FAM187B,LSR
SE_02_012400496 chr19:35201267-35217472 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 496 2 481 66 0 30 0 FXYD5,FAM187B,LSR
SE_00_004400147 chr19:35202736-35217593 Sample_00_0044 Cord blood T-cell 147 2 435 58 0 30 0 FXYD5,FAM187B,LSR
SE_02_036300463 chr19:35202888-35226220 Sample_02_0363 Haematopoietic and lymphoid tissue 697 463 3 656 88 0 36 179 FAM187B,FXYD5,LSR,USF2
SE_02_023401024 chr19:35203089-35217165 Sample_02_0234 Tonsil Th17 1024 2 415 55 0 30 0 FXYD5,FAM187B,LSR
SE_01_008400895 chr19:35203143-35218074 Sample_01_0084 Spleen spleen 895 1 434 55 0 30 0 FXYD5,FAM187B,LSR
SE_01_002000617 chr19:35203173-35217116 Sample_01_0020 Blood B-cell 617 1 411 52 0 30 0 FXYD5,FAM187B,LSR
SE_02_122400606 chr19:35203183-35216952 Sample_02_1224 Bone marrow normal plasma cell 606 5 410 52 0 30 0 FXYD5,LSR,FAM187B
SE_02_002600093 chr19:35203203-35221008 Sample_02_0026 Blood CD4donorE 93 6 506 68 0 30 0 FXYD5,LSR,USF2,FAM187B
SE_00_000900603 chr19:35203241-35216155 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 603 5 382 47 0 30 0 FXYD5,FAM187B,LSR
SE_02_099800426 chr19:35203300-35225250 Sample_02_0998 Lymphoma OCI-LY1_DMSO 426 11 615 83 0 36 137 FAM187B,FXYD5,USF2,LSR
SE_00_002700332 chr19:35203332-35215152 Sample_00_0027 Blood natural-killer-cell 332 2 353 45 0 30 0 FXYD5,FAM187B,LSR
SE_02_038700299 chr19:35203363-35223456 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 299 15 564 78 0 30 0 FXYD5,LSR,USF2,FAM187B
SE_02_014700113 chr19:35203405-35214945 Sample_02_0147 Blood CD4_T_cells 113 5 347 45 0 30 0 FXYD5,FAM187B,LSR
SE_02_002300438 chr19:35203477-35214681 Sample_02_0023 Blood CD8donorC 438 14 337 43 0 30 0 FXYD5,FAM187B,LSR
SE_01_005300370 chr19:35203580-35225337 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 370 3 606 81 0 36 155 FAM187B,FXYD5,LSR,USF2
SE_00_000700601 chr19:35203587-35216197 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 601 1 368 46 0 30 0 FXYD5,FAM187B,LSR
SE_00_000500135 chr19:35203803-35216956 Sample_00_0005 Blood B-cell 135 4 388 50 0 30 0 FXYD5,FAM187B,LSR
SE_02_078400486 chr19:35203804-35216978 Sample_02_0784 Blood OSU-CLL 486 5 388 50 0 30 0 FXYD5,LSR,FAM187B
SE_02_099900623 chr19:35203840-35216989 Sample_02_0999 Lymphoma OCI-LY1_966 623 9 387 50 0 30 0 FXYD5,LSR,FAM187B
SE_02_088500556 chr19:35203907-35224386 Sample_02_0885 Blood NALM6_2 556 6 572 78 0 34 0 FXYD5,USF2,FAM187B,LSR
SE_02_059100161 chr19:35203935-35215331 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 161 8 338 42 0 30 0 FXYD5,LSR,FAM187B,FXYD1,USF2,LGI4
SE_02_104500289 chr19:35203971-35217215 Sample_02_1045 Peripheral blood CD4+ CD7- cells_CTCL992 289 11 388 49 0 30 0 FXYD5,LSR,FAM187B
SE_02_104602839 chr19:35203998-35232729 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2839 11 831 117 3 47 381 FAM187B,FXYD5,USF2,HAMP,LSR
SE_02_104400161 chr19:35204018-35222964 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 161 15 529 73 0 30 0 FXYD5,USF2,FAM187B,LSR
SE_02_073600058 chr19:35204401-35216530 Sample_02_0736 Blood Pt24_leukemia cell_THZ1 58 9 347 42 0 24 0 FXYD5,LSR,FAM187B
SE_02_002200454 chr19:35204474-35214749 Sample_02_0022 Blood CD8donorA 454 8 303 40 0 23 0 FXYD5,FAM187B,LSR
SE_02_073900851 chr19:35204486-35224794 Sample_02_0739 Blood Nalm6 851 12 552 77 0 28 31 FXYD5,USF2,FAM187B,LSR
SE_02_121800754 chr19:35204487-35217396 Sample_02_1218 Bone marrow Daudi 754 10 365 47 0 23 0 FXYD5,LSR,FAM187B
SE_02_122100567 chr19:35204594-35216894 Sample_02_1221 Bone marrow KMS11 567 7 351 45 0 23 0 FXYD5,LSR,FAM187B
SE_00_003901076 chr19:35204703-35221145 Sample_00_0039 Spleen spleen_3y 1076 3 451 63 0 23 0 FXYD5,LSR,USF2,FAM187B
SE_02_122300852 chr19:35204747-35216914 Sample_02_1223 Bone marrow KMS28BM 852 7 348 45 0 23 0 FXYD5,FAM187B,LSR
SE_02_014800184 chr19:35204755-35214825 Sample_02_0148 Blood CD8_T_cells 184 3 295 39 0 23 0 FXYD5,FAM187B,LSR
SE_02_157301151 chr19:35204929-35218793 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 1151 5 390 51 0 23 0 FXYD5,FAM187B,LSR
SE_02_139300421 chr19:35204993-35214664 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 421 5 284 36 0 23 0 FAM187B,LSR
SE_01_004800223 chr19:35205004-35214713 Sample_01_0048 Peripheral blood MM.1S 223 4 285 36 0 23 0 FAM187B,LSR
SE_02_158500437 chr19:35205049-35214490 Sample_02_1585 Blood SupB15 DMSO 437 7 279 36 0 23 0 FAM187B,LSR
SE_02_002500324 chr19:35205112-35215935 Sample_02_0025 Blood CD19donorA 324 10 312 37 0 23 0 FAM187B,LSR
SE_00_004700450 chr19:35205184-35214726 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 450 4 283 37 0 23 0 FAM187B,LSR
SE_02_059200304 chr19:35205235-35214606 Sample_02_0592 PBMCs adult CD4+CD25hiCD127lo regulatory T cells 304 6 277 36 0 23 0 FAM187B,LSR
SE_02_059300260 chr19:35205277-35214846 Sample_02_0593 Fetal spleenocytes fetal naive T cells 260 6 284 37 0 23 0 FAM187B,LSR,FXYD5,MAG,USF2,FXYD7,ZNF792
SE_02_140200161 chr19:35205703-35214519 Sample_02_1402 Blood MM.1S_GNE-781 161 2 260 34 0 23 0 FAM187B,LSR
SE_02_104000307 chr19:35238726-35267881 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 307 12 841 114 0 106 1159 LSR,USF2,HAMP,MAG,FAM187B
SE_01_008400994 chr19:35239523-35273041 Sample_01_0084 Spleen spleen 994 7 976 119 0 191 1873 LSR,USF2,MAG,FAM187B,HAMP
SE_02_122901179 chr19:35244809-35271189 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1179 8 775 102 0 179 1842 LSR,USF2,HAMP,MAG,FAM187B
SE_02_035500462 chr19:35246640-35253150 Sample_02_0355 Colon HCT15 462 2 195 35 0 51 362 LSR,MAG,FAM187B,HAMP,USF2
SE_02_003601418 chr19:35246842-35249712 Sample_02_0036 Embryo H7 1418 1 89 18 0 38 219 LSR,MAG,FAM187B,HAMP,USF2
SE_02_105200106 chr19:35246927-35250739 Sample_02_1052 Esophagus JH-EsoAd1 106 1 126 22 0 51 346 LSR,USF2,HAMP,MAG,FAM187B
SE_02_072200437 chr19:35246936-35250795 Sample_02_0722 Pancreas PATU8988S_TP63dN_DOX 437 1 126 22 0 51 355 LSR,USF2,HAMP,MAG,FAM187B
SE_02_003200520 chr19:35246941-35251159 Sample_02_0032 Pancreas pancreatic-islets-M 520 1 138 23 0 51 362 LSR,MAG,FAM187B,HAMP,USF2
SE_00_001600115 chr19:35247027-35249729 Sample_00_0016 Foreskin iPS-DF-19.11 120 1 84 16 0 38 219 LSR,MAG,FAM187B,HAMP,USF2
SE_02_004800613 chr19:35247133-35250220 Sample_02_0048 Embryo endodermal CyT49_HE 613 1 93 17 0 38 232 LSR,MAG,FAM187B,HAMP,USF2
SE_02_003900844 chr19:35247171-35253979 Sample_02_0039 Embryo AFG 844 2 200 35 0 51 362 LSR,MAG,FAM187B,HAMP,USF2
SE_02_004600140 chr19:35247181-35254240 Sample_02_0046 Embryo endodermal CyT49_ES_D10 140 2 213 38 0 51 362 LSR,MAG,FAM187B,HAMP,USF2
SE_02_004500204 chr19:35247212-35254236 Sample_02_0045 Embryo endodermal CyT49_ES_D7 204 2 211 38 0 51 362 LSR,MAG,FAM187B,HAMP,USF2
SE_02_001700257 chr19:35247245-35268997 Sample_02_0017 Embryo H9_ESC 257 3 648 85 0 129 1270 LSR,USF2,MAG,FAM187B,HAMP
SE_02_003801722 chr19:35247266-35249889 Sample_02_0038 Embryo DE 1722 1 80 16 0 38 219 LSR,MAG,FAM187B,HAMP,USF2
SE_02_004300843 chr19:35247327-35254129 Sample_02_0043 Embryo endodermal CyT49_ES_D2 843 2 203 36 0 51 362 LSR,MAG,FAM187B,HAMP,USF2
SE_02_039602055 chr19:35247357-35250930 Sample_02_0396 Skin NHEK-D 2055 1 115 19 0 50 362 LSR,MAG,FAM187B,HAMP,USF2
SE_02_004400331 chr19:35247445-35249621 Sample_02_0044 Embryo endodermal CyT49_ES_D5 331 1 67 13 0 37 219 LSR,MAG,FAM187B,HAMP,USF2
SE_02_076500323 chr19:35247471-35271823 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 323 6 729 88 0 188 1873 LSR,USF2,HAMP,MAG,FAM187B
SE_02_093700323 chr19:35247487-35268882 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 323 7 639 83 0 122 1248 LSR,USF2,HAMP,MAG,FAM187B
SE_02_115100296 chr19:35247489-35280237 Sample_02_1151 Mammary gland MCF-7_UNTR 296 13 987 123 0 216 2218 LSR,USF2,CD22,MAG,HAMP,FAM187B
SE_02_104901978 chr19:35247511-35251085 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1978 1 111 17 0 50 362 LSR,USF2,HAMP,MAG,FAM187B
SE_02_093500138 chr19:35247534-35270226 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 138 6 658 84 0 166 1684 LSR,USF2,HAMP,MAG,FAM187B
SE_02_104701914 chr19:35247607-35250729 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1914 1 102 14 0 50 345 LSR,USF2,HAMP,MAG,FAM187B
SE_02_007300328 chr19:35250233-35279877 Sample_02_0073 Other 90-8TL_DMSO 328 5 892 105 0 172 1956 LSR,USF2,HAMP,MAG,CD22,FAM187B
SE_02_103500092 chr19:35250379-35279403 Sample_02_1035 Mammary gland HCC70_Vehicle 92 9 877 103 0 167 1816 LSR,USF2,CD22,MAG,HAMP,FAM187B
SE_02_103600075 chr19:35250394-35279397 Sample_02_1036 Mammary gland HCC70_XY018 75 14 877 103 0 167 1812 LSR,USF2,CD22,MAG,HAMP,FAM187B
SE_02_081601676 chr19:35253620-35270245 Sample_02_0816 Ovary Clear cell ovarian cancer 1676 3 478 53 0 116 1322 LSR,USF2,HAMP,MAG,FAM187B
SE_02_104800789 chr19:35253719-35273951 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 789 12 619 61 0 144 1511 LSR,USF2,HAMP,MAG,FAM187B
SE_00_005100778 chr19:35255926-35279135 Sample_00_0051 Adrenal gland adrenal gland 30y 778 8 692 73 0 150 1659 LSR,USF2,HAMP,MAG,FAM187B
SE_02_032700535 chr19:35258461-35287931 Sample_02_0327 Liver hepatocytes_d6 535 4 889 98 0 163 2107 LSR,USF2,HAMP,MAG,CD22,FAM187B
SE_02_058400081 chr19:35261621-35270420 Sample_02_0584 Lung H1299 WT 81 4 269 29 0 89 1226 LSR,USF2,HAMP,MAG,FAM187B
SE_02_083500285 chr19:35263773-35273280 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 285 6 293 24 0 102 1177 LSR,USF2,HAMP,MAG,FAM187B
SE_02_083700386 chr19:35263878-35273360 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 386 2 292 24 0 106 1177 LSR,USF2,HAMP,MAG,FAM187B
SE_02_083300471 chr19:35264245-35273063 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 471 5 276 21 0 102 1177 LSR,USF2,HAMP,MAG,FAM187B
SE_02_083600364 chr19:35264320-35273149 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 364 4 278 21 0 102 1177 LSR,USF2,HAMP,MAG,FAM187B
SE_02_083400398 chr19:35264355-35273550 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 398 3 289 22 0 106 1177 LSR,USF2,HAMP,MAG,FAM187B
SE_02_093001525 chr19:35264829-35285241 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1525 8 631 68 0 140 1758 USF2,LSR,HAMP,CD22,MAG,FAM187B
SE_02_039601076 chr19:35264999-35272746 Sample_02_0396 Skin NHEK-D 1076 1 239 19 0 102 1177 LSR,USF2,MAG,FAM187B,HAMP
SE_01_011200117 chr19:35265697-35270192 Sample_01_0112 Embryonic kidney HEK293_encode 117 2 119 12 0 78 988 LSR,USF2,HAMP,MAG,FAM187B
SE_02_029300372 chr19:35266120-35270638 Sample_02_0293 Pancreatic L3-6_4SC-202 372 1 124 11 0 83 1056 LSR,USF2,MAG,FAM187B,HAMP
SE_02_081000530 chr19:35266356-35270749 Sample_02_0810 Mammary gland T47D noSerum 530 1 120 8 0 84 1037 LSR,USF2,HAMP,MAG,FAM187B
SE_02_111400159 chr19:35266410-35270226 Sample_02_1114 Embryonic kidney HEK293 159 2 103 7 0 77 929 LSR,USF2,HAMP,MAG,FAM187B
SE_02_117401079 chr19:35266438-35284532 Sample_02_1174 Brain GBM02 1079 5 562 58 0 139 1571 USF2,LSR,HAMP,CD22,MAG,FAM187B
SE_02_062300277 chr19:35266477-35270760 Sample_02_0623 Mammary gland TAMR_E2 277 1 118 8 0 83 1002 LSR,USF2,HAMP,MAG,FAM187B
SE_02_041300182 chr19:35266591-35270456 Sample_02_0413 Brain GBM_2493 182 1 104 5 0 76 904 LSR,USF2,MAG,FAM187B,HAMP
SE_02_119700771 chr19:35266661-35285154 Sample_02_1197 Brain GBM33 771 6 574 58 0 138 1619 USF2,LSR,HAMP,CD22,MAG,FAM187B
SE_02_027400689 chr19:35266662-35270409 Sample_02_0274 Endometriosis hTERT_KD 689 1 97 5 0 76 886 LSR,USF2,MAG,FAM187B,HAMP
SE_02_062400428 chr19:35266699-35270523 Sample_02_0624 Mammary gland TAMR_VEH 428 1 97 5 0 80 898 LSR,USF2,HAMP,MAG,FAM187B
SE_02_109500654 chr19:35266783-35270059 Sample_02_1095 Blood CD34 Erythroid cells_Don002 654 1 75 5 0 72 799 LSR,USF2,HAMP,MAG,FAM187B
SE_04_001000695 chr19:35266814-35270199 Sample_04_0010 Lung A549 TGFb 695 1 79 5 0 75 826 LSR,USF2,HAMP,MAG,FAM187B
SE_04_000900593 chr19:35266845-35270119 Sample_04_0009 Lung A549 593 1 72 5 0 75 795 LSR,USF2,HAMP,MAG,FAM187B
SE_02_136300561 chr19:35266884-35269870 Sample_02_1363 Blood Hudep2 561 1 69 5 0 62 707 LSR,USF2,HAMP,MAG,FAM187B
SE_02_132200805 chr19:35266885-35270230 Sample_02_1322 Connective Tissue HT1080_WT 805 1 78 5 0 75 806 LSR,USF2,HAMP,MAG,FAM187B
SE_02_122300949 chr19:35266898-35270381 Sample_02_1223 Bone marrow KMS28BM 949 1 85 5 0 75 816 LSR,USF2,HAMP,MAG,FAM187B
SE_02_064501415 chr19:35266914-35270365 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1415 1 84 5 0 75 816 LSR,USF2,HAMP,MAG,FAM187B
SE_02_132000804 chr19:35266917-35270388 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 804 1 84 5 0 75 815 LSR,USF2,HAMP,MAG,FAM187B
SE_02_064801426 chr19:35266926-35270059 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1426 1 68 5 0 72 768 LSR,USF2,HAMP,MAG,FAM187B
SE_02_114800314 chr19:35266932-35270125 Sample_02_1148 Kidney WT 9-12_control_vehicle 314 1 68 5 0 75 783 LSR,USF2,HAMP,MAG,FAM187B
SE_02_133600051 chr19:35266936-35270017 Sample_02_1336 Lung NCI-H1299_mutSMARCA4_Dox 51 1 67 5 0 71 740 LSR,USF2,HAMP,MAG,FAM187B
SE_02_010600468 chr19:35266939-35270343 Sample_02_0106 Skin NHEK_M 468 1 83 5 0 75 805 LSR,USF2,MAG,FAM187B,HAMP
SE_02_096900690 chr19:35266944-35280361 Sample_02_0969 Brain H3.3K27M_PL637 690 2 408 44 0 126 1326 LSR,USF2,CD22,MAG,HAMP,FAM187B
SE_04_000500323 chr19:35266978-35270180 Sample_04_0005 Lung A549 FOXA2 overexpressed 323 1 68 5 0 75 778 LSR,USF2,HAMP,MAG,FAM187B
SE_02_122000339 chr19:35266986-35270168 Sample_02_1220 Bone marrow JJN3 339 1 67 5 0 75 770 LSR,USF2,HAMP,MAG,FAM187B
SE_02_095500443 chr19:35266991-35270118 Sample_02_0955 Brain IDH1_2469 443 1 66 5 0 75 754 LSR,USF2,HAMP,MAG,FAM187B
SE_02_035000446 chr19:35271386-35293993 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 446 9 739 72 0 85 750 MAG,USF2,HAMP,LSR,CD22,FAM187B
SE_02_125100266 chr19:35287161-35332156 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 266 10 1317 104 1 152 1712 CD22,MAG,USF2,FFAR3,MIR5196,HAMP,FFAR1,LSR
SE_02_125000257 chr19:35287219-35332136 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 257 8 1315 104 1 152 1710 CD22,MAG,USF2,FFAR3,MIR5196,HAMP,FFAR1,LSR
SE_02_120301130 chr19:35288962-35294120 Sample_02_1203 Brain NB1 1130 1 203 13 0 36 171 MAG,USF2,CD22,HAMP,LSR
SE_02_101300349 chr19:35289105-35319830 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 349 8 925 70 1 141 1572 MAG,USF2,CD22,FFAR3,MIR5196,HAMP,FFAR1,LSR
SE_02_119800530 chr19:35289210-35320901 Sample_02_1198 Brain GBM34 530 14 948 72 1 143 1572 MAG,USF2,CD22,FFAR3,MIR5196,HAMP,FFAR1,LSR
SE_02_117300569 chr19:35289451-35296604 Sample_02_1173 Brain GBM01 569 1 258 15 0 53 450 MAG,USF2,CD22,MIR5196,HAMP,LSR
SE_02_121301084 chr19:35289869-35294515 Sample_02_1213 Brain GBM31 1084 1 196 13 0 37 235 MAG,USF2,CD22,HAMP,LSR
SE_02_121800297 chr19:35293339-35333194 Sample_02_1218 Bone marrow Daudi 297 19 1114 88 1 130 1682 CD22,MAG,USF2,FFAR3,MIR5196,HAMP,FFAR1,LSR,FXYD5
SE_02_099800239 chr19:35294003-35335325 Sample_02_0998 Lymphoma OCI-LY1_DMSO 239 18 1155 101 1 118 1682 CD22,MAG,USF2,FFAR3,MIR5196,HAMP,FFAR1,LSR
SE_02_099900308 chr19:35294040-35334680 Sample_02_0999 Lymphoma OCI-LY1_966 308 17 1136 94 1 118 1680 CD22,MAG,USF2,FFAR3,MIR5196,HAMP,FFAR1,LSR
SE_02_130300257 chr19:35294141-35349689 Sample_02_1303 Lymphoma RL_tazemetostat 257 14 1677 163 5 155 2947 CD22,MAG,MIR5196,USF2,FFAR3,HAMP,FFAR1,LSR
SE_02_115200186 chr19:35294279-35349792 Sample_02_1152 Lymphoma RL_WT_gRNA1 186 8 1680 163 5 155 2913 CD22,MAG,MIR5196,USF2,FFAR3,HAMP,FFAR1,LSR
SE_02_109900754 chr19:35294485-35319948 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 754 10 714 56 1 104 1337 MAG,USF2,CD22,FFAR3,MIR5196,HAMP,FFAR1,LSR,GPR42
SE_02_088500319 chr19:35294668-35332335 Sample_02_0885 Blood NALM6_2 319 8 1044 82 1 115 1491 CD22,MAG,USF2,FFAR3,MIR5196,HAMP,FFAR1,LSR
SE_02_115300271 chr19:35294866-35350024 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 271 8 1677 163 5 154 2891 CD22,MAG,MIR5196,USF2,FFAR3,HAMP,FFAR1,LSR
SE_02_098700552 chr19:35295483-35319721 Sample_02_0987 Blood K562_Control_1 552 12 690 56 1 102 1292 MAG,USF2,CD22,FFAR3,MIR5196,HAMP,FFAR1,LSR,GPR42
SE_02_116200387 chr19:35295541-35320972 Sample_02_1162 Stomach YCC11 387 13 717 58 1 104 1265 MAG,USF2,CD22,FFAR3,MIR5196,HAMP,FFAR1,LSR
SE_02_075800385 chr19:35295654-35348107 Sample_02_0758 Peripheral blood REH 385 10 1576 154 5 147 2792 CD22,MAG,MIR5196,USF2,FFAR3,HAMP,FFAR1,LSR
SE_02_122900924 chr19:35296226-35320528 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 924 16 681 57 1 89 1122 MAG,USF2,CD22,FFAR3,MIR5196,HAMP,FFAR1,LSR,GPR42
SE_01_003900210 chr19:35296949-35319605 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 210 9 646 52 1 87 1122 MAG,HAMP,LSR,USF2,CD22,FFAR1,FFAR3,GPR42,AG
SE_02_087200571 chr19:35297213-35320021 Sample_02_0872 Colon HCT116_siCtrl-5FU 571 6 648 52 1 87 1122 MAG,USF2,CD22,FFAR3,MIR5196,HAMP,FFAR1,LSR
Genomic distribution of SEs associated with LSR
Genome Browser

The strength of the tissue affected by the gene

Expression of LSR

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)