SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_072200437
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: PATU8988S_TP63dN_DOX
Genomic region: chr19:35246936-35250795
Size: 3859
Super-enhancer rank 437
Number of SE elements: 1
ChIP density(Case|Control): 15432.5269|806.531
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LSR ;
ROSE Overlap LSR ;
ROSE Proximal USF2 ; HAMP ; MAG ; LSR ; FAM187B ;
ROSE Closest LSR ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LSR ; USF2 ; MAG ; HAMP ; FXYD5 ; FAM187B ; CD22 ; MIR5196 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_072200437 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers