SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900210
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:35296949-35319605
Size: 22656
Super-enhancer rank 210
Number of SE elements: 9
ChIP density(Case|Control): 41548.8384|2872.7808
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAG ;
ROSE Overlap MAG ;
ROSE Proximal HAMP ; LSR ; USF2 ; CD22 ; FFAR1 ; FFAR3 ;
ROSE Closest MAG ;
Lasso CD22 ; GPR42 ; LSR ; USF2 ;
PreSTIGE CD22 ; AG ;
ABC ;
BETA LSR ; USF2 ; MAG ; HAMP ; FAM187B ; CD22 ; FFAR1 ; LINC01531 ; FFAR3 ; MIR5196 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900210 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers