SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID:
Gene: LOC102503427 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_086800003 chr5:72347443-72552761 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 3 120 5415 337 33 499 1017 ZNF366,PTCD2,LOC102503427,MRPS27
SE_02_053300070 chr5:72363317-72520709 Sample_02_0533 Blood vessel Circle of Willis_54y 70 56 4142 217 26 461 743 ZNF366,LOC102503427,PTCD2,MRPS27
SE_02_090800118 chr5:72365877-72524047 Sample_02_0908 Heart left ventricle_DCM_LV1262 118 38 4163 220 26 461 743 ZNF366,LOC102503427,PTCD2,MRPS27
SE_02_090900114 chr5:72388552-72520428 Sample_02_0909 Heart left ventricle_DCM_LV1264 114 36 3527 183 26 425 743 ZNF366,LOC102503427
SE_02_061100297 chr5:72426000-72519233 Sample_02_0611 Liposarcoma DDLPS_T1 297 34 2549 135 15 366 743 ZNF366,LOC102503427
SE_02_131000044 chr5:72427001-72552812 Sample_02_1310 Bone marrow ASMSCs 44 23 3488 246 23 395 743 ZNF366,LOC102503427
SE_02_131100029 chr5:72427073-72552796 Sample_02_1311 Bone marrow HDMSCs 29 23 3486 246 23 395 743 ZNF366,LOC102503427
SE_02_091300267 chr5:72427181-72524109 Sample_02_0913 Heart left ventricle_DCM_LV1304 267 25 2636 144 16 366 743 ZNF366,LOC102503427
SE_02_088800351 chr5:72427343-72519564 Sample_02_0888 Heart left ventricle_LV1160 351 26 2517 135 15 366 743 ZNF366,LOC102503427
SE_02_091000296 chr5:72427526-72524034 Sample_02_0910 Heart left ventricle_DCM_LV1275 296 21 2624 144 16 366 743 ZNF366,LOC102503427
SE_02_091100289 chr5:72427589-72519225 Sample_02_0911 Heart left ventricle_DCM_LV1290 289 35 2507 135 15 366 743 ZNF366,LOC102503427
SE_02_089800571 chr5:72427637-72519530 Sample_02_0898 Heart left ventricle_LV1356 571 27 2512 135 15 365 743 ZNF366,LOC102503427
SE_02_091500098 chr5:72427742-72519336 Sample_02_0915 Heart left ventricle_DCM_LV1371 98 23 2504 135 15 364 743 ZNF366,LOC102503427
SE_02_081500027 chr5:72427758-72553194 Sample_02_0815 Mammary gland SUM159PT 27 19 3472 246 23 398 743 ZNF366,LOC102503427
SE_02_089900104 chr5:72433465-72524024 Sample_02_0899 Heart left ventricle_LV1400 104 26 2424 132 14 362 743 ZNF366,LOC102503427
SE_02_144500068 chr5:72434140-72530596 Sample_02_1445 Adipose SW872_TAZ4SA 68 23 2596 138 14 361 743 ZNF366,LOC102503427
SE_02_144900055 chr5:72439468-72513335 Sample_02_1449 Adipose SW872_YAP_TFE3 55 17 1965 106 10 312 743 ZNF366,LOC102503427
SE_02_085800030 chr5:72439607-72519888 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 30 14 2142 118 14 338 743 ZNF366,LOC102503427
SE_02_094900143 chr5:72440386-72528039 Sample_02_0949 Umbilical artery HUAEC_WT 143 43 2333 130 14 326 743 ZNF366,LOC102503427
SE_02_086700256 chr5:72440463-72552658 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 256 45 3071 227 21 355 743 ZNF366,LOC102503427
SE_02_044200686 chr5:72440604-72524050 Sample_02_0442 Bone MG63.3 686 32 2220 126 14 326 743 ZNF366,LOC102503427
SE_02_095000421 chr5:72441030-72525343 Sample_02_0950 Umbilical vein HUVEC_WT 421 34 2236 126 14 325 743 ZNF366,LOC102503427
SE_02_083100162 chr5:72441052-72524124 Sample_02_0831 Umblical vein HUVECs_TNF0min 162 23 2206 126 14 325 743 ZNF366,LOC102503427
SE_02_147100302 chr5:72441075-72518714 Sample_02_1471 Blood Outgrowth Endothelia BOEC 302 19 2072 117 13 321 743 ZNF366,LOC102503427
SE_02_152200063 chr5:72441115-72524094 Sample_02_1522 Skin A375 RTKi 63 21 2205 126 14 325 743 ZNF366,LOC102503427
SE_02_058500198 chr5:72441221-72518756 Sample_02_0585 Umbilical vein HUVEC 0hour 198 21 2072 117 13 321 743 ZNF366,LOC102503427
SE_02_061300198 chr5:72441350-72532301 Sample_02_0613 Liposarcoma MLPS_T1 198 36 2438 134 14 325 743 ZNF366,LOC102503427
SE_02_130900189 chr5:72441414-72524644 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 189 9 2210 126 14 325 743 ZNF366,LOC102503427
SE_02_130800323 chr5:72441450-72524518 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 323 10 2207 126 14 325 743 ZNF366,LOC102503427
SE_02_089100567 chr5:72449636-72519490 Sample_02_0891 Heart left ventricle_LV1202 567 18 1853 105 10 301 490 ZNF366,LOC102503427
SE_02_141000280 chr5:72450469-72542040 Sample_02_1410 Brain GSC6 280 18 2452 153 15 310 490 ZNF366,LOC102503427
SE_02_149600015 chr5:72462940-72522482 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 15 37 1565 97 8 188 65 ZNF366,LOC102503427,MRPS27
SE_02_046500947 chr5:72466923-72511165 Sample_02_0465 Adipose subcutaneous adipocytes 947 25 1153 71 4 155 65 ZNF366,LOC102503427
SE_02_155500063 chr5:72471958-72519638 Sample_02_1555 Gastrointestinal Stromal GIST-4_KIT e9 63 18 1242 77 5 175 65 ZNF366,LOC102503427
SE_02_091400506 chr5:72478457-72519571 Sample_02_0914 Heart left ventricle_DCM_LV1342 506 11 1078 71 3 163 65 ZNF366,LOC102503427
SE_02_090000693 chr5:72485437-72524051 Sample_02_0900 Heart left ventricle_LV1452 693 10 1024 76 4 147 65 ZNF366,LOC102503427
SE_02_091600483 chr5:72486159-72519611 Sample_02_0916 Heart left ventricle_DCM_LV1392 483 9 895 66 3 147 65 ZNF366,LOC102503427
SE_02_089000690 chr5:72486532-72519313 Sample_02_0890 Heart left ventricle_LV1200 690 7 885 66 3 147 65 ZNF366,LOC102503427
SE_02_102000188 chr5:72494179-72524544 Sample_02_1020 Mammary gland SUM159 188 6 825 62 4 127 65 ZNF366,LOC102503427
SE_02_091201195 chr5:72494285-72524129 Sample_02_0912 Heart left ventricle_DCM_LV1300 1195 6 813 62 4 126 65 ZNF366,LOC102503427
SE_02_102100339 chr5:72494300-72524133 Sample_02_1021 Mammary gland SUM159R 339 5 813 62 4 126 65 ZNF366,LOC102503427
SE_02_102300053 chr5:72494342-72526815 Sample_02_1023 Mammary gland SUM159_BRD7_KO 53 6 881 63 4 126 65 ZNF366,LOC102503427
SE_02_154900173 chr5:72494475-72526416 Sample_02_1549 Gastrointestinal Stromal GIST-430B 173 10 867 63 4 126 65 ZNF366,LOC102503427
SE_02_048101602 chr5:72497515-72523982 Sample_02_0481 Mammary gland MDA-MB231 1602 8 725 57 4 118 65 ZNF366,LOC102503427
SE_02_154300237 chr5:72498290-72511802 Sample_02_1543 Gastrointestinal Stromal GIST-48 237 4 375 33 0 87 65 ZNF366,LOC102503427
SE_02_085600466 chr5:72498585-72519765 Sample_02_0856 Glioblastoma Glioblastoma neurosphere cell_HF-3016 466 5 590 49 3 116 65 ZNF366,LOC102503427
SE_02_088700997 chr5:72499025-72519785 Sample_02_0887 Heart left ventricle_LV1121 997 6 581 48 3 116 65 ZNF366,LOC102503427
SE_02_089201410 chr5:72499051-72524125 Sample_02_0892 Heart left ventricle_LV1215 1410 5 691 57 4 116 65 ZNF366,LOC102503427
SE_02_155600351 chr5:72499154-72519745 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 351 8 578 48 3 116 65 ZNF366,LOC102503427
SE_02_089500660 chr5:72499182-72519223 Sample_02_0895 Heart left ventricle_LV1259 660 7 571 48 3 116 65 ZNF366,LOC102503427
SE_02_092000983 chr5:72499494-72519234 Sample_02_0920 Heart left ventricle_DCM_LV1535 983 8 565 48 3 116 65 ZNF366,LOC102503427
SE_02_091801036 chr5:72499596-72519079 Sample_02_0918 Heart left ventricle_DCM_LV1437 1036 9 556 48 3 111 65 ZNF366,LOC102503427
SE_02_095100487 chr5:72500222-72519286 Sample_02_0951 HMSCs hMSCs 487 9 551 47 3 106 65 ZNF366,LOC102503427
SE_02_085700915 chr5:72500381-72518635 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 915 4 525 42 3 102 65 ZNF366,LOC102503427
SE_02_085400521 chr5:72500658-72542234 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 521 5 1173 93 8 115 65 ZNF366,LOC102503427
SE_02_085500321 chr5:72501065-72519505 Sample_02_0855 Glioblastoma Glioblastoma neurosphere cell_HF-2927 321 3 540 44 3 105 65 ZNF366,LOC102503427
SE_02_097200690 chr5:72501074-72518607 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 690 5 515 42 3 101 65 ZNF366,LOC102503427
SE_02_141500303 chr5:72501118-72553604 Sample_02_1415 Brain DIPGIV 303 14 1513 155 11 139 65 ZNF366,LOC102503427
SE_02_099100850 chr5:72502438-72519905 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 850 4 515 41 4 94 65 ZNF366,LOC102503427
SE_02_149500075 chr5:72503167-72520073 Sample_02_1495 Other monocyte-derived dendritic cells_R848_1h 75 5 496 38 4 94 65 ZNF366,LOC102503427,MRPS27
SE_02_149400375 chr5:72503376-72519872 Sample_02_1494 Other monocyte-derived dendritic cells_0h 375 8 485 38 4 94 65 ZNF366,LOC102503427,MRPS27
SE_02_094100259 chr5:72503515-72513314 Sample_02_0941 Brain T98G 259 2 295 22 0 68 65 ZNF366,LOC102503427
SE_02_156400218 chr5:72503953-72525991 Sample_02_1564 Gastrointestinal Stromal GIST-430 218 9 624 43 4 92 65 ZNF366,LOC102503427
SE_02_131000233 chr5:72583460-72634971 Sample_02_1310 Bone marrow ASMSCs 233 6 1184 74 6 130 0 LOC102477328,LOC102503427
SE_02_131100197 chr5:72583618-72635226 Sample_02_1311 Bone marrow HDMSCs 197 8 1186 74 6 130 0 LOC102477328,LOC102503427
SE_02_156900292 chr5:72583936-72625440 Sample_02_1569 Endothelial Endothelial cells 292 6 957 50 3 126 0 LOC102477328,LOC102503427
SE_02_046600993 chr5:72584111-72634554 Sample_02_0466 Adipose visceral adipocytes 993 17 1162 73 6 130 0 LOC102477328,LOC102503427
SE_02_056900739 chr5:72584166-72634532 Sample_02_0569 Periodontal ligament mesenchymal stem cell 739 15 1160 73 6 130 0 LOC102477328,LOC102503427
SE_02_094900185 chr5:72584213-72635144 Sample_02_0949 Umbilical artery HUAEC_WT 185 18 1172 74 6 130 0 LOC102477328,LOC102503427
SE_02_130800716 chr5:72584326-72611260 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 716 6 629 26 1 69 0 LOC102477328,LOC102503427
SE_02_130900407 chr5:72584591-72611272 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 407 6 620 25 1 69 0 LOC102477328,LOC102503427
SE_02_086701460 chr5:72584617-72634386 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1460 16 1146 70 6 130 0 LOC102477328,LOC102503427
SE_02_086800299 chr5:72584922-72625750 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 299 25 940 47 3 125 0 LOC102477328,LOC102503427
SE_02_127600377 chr5:72585973-72625140 Sample_02_1276 Prostate PC3_GSK126 377 20 904 47 3 119 0 LOC102477328,LOC102503427
SE_02_049901052 chr5:72586120-72635167 Sample_02_0499 Fetal lung IMR90 IR Senescence 1052 13 1128 71 6 124 0 LOC102477328,LOC102503427
SE_02_093001251 chr5:72586166-72606398 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1251 9 457 15 1 42 0 LOC102477328,LOC102503427
SE_02_154900533 chr5:72586186-72611203 Sample_02_1549 Gastrointestinal Stromal GIST-430B 533 8 583 23 1 63 0 LOC102477328,LOC102503427
SE_02_119900819 chr5:72586247-72612848 Sample_02_1199 Brain GBM35 819 7 623 28 2 85 0 LOC102477328,LOC102503427
SE_02_124200105 chr5:72586377-72635753 Sample_02_1242 Skin UISO_virus_negative 105 19 1136 72 6 124 0 LOC102477328,LOC102503427
SE_02_127400184 chr5:72586435-72614785 Sample_02_1274 Prostate PC3_DMSO 184 18 679 32 2 87 0 LOC102477328,LOC102503427
SE_02_095000654 chr5:72586463-72611263 Sample_02_0950 Umbilical vein HUVEC_WT 654 11 581 23 1 63 0 LOC102477328,LOC102503427
SE_02_156800157 chr5:72586602-72605510 Sample_02_1568 Heart Cardiac progenitor cells 157 3 430 12 0 42 0 LOC102477328,LOC102503427
SE_02_143801220 chr5:72586621-72606000 Sample_02_1438 Liver LSEC 1220 4 442 13 0 42 0 LOC102477328,LOC102503427
SE_02_132800848 chr5:72586666-72613533 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 848 9 637 29 2 86 0 LOC102477328,LOC102503427
SE_02_143601236 chr5:72586689-72605819 Sample_02_1436 Liver LSEC-Ctrl 1236 4 438 13 0 42 0 LOC102477328,LOC102503427
SE_02_083100574 chr5:72586733-72607598 Sample_02_0831 Umblical vein HUVECs_TNF0min 574 11 478 18 1 42 0 LOC102477328,LOC102503427
SE_00_005300960 chr5:72586740-72606025 Sample_00_0053 Embryo trophoblast cell originated from H1 960 6 440 13 0 42 0 LOC102477328,LOC102503427
SE_02_058500405 chr5:72586751-72606366 Sample_02_0585 Umbilical vein HUVEC 0hour 405 8 448 15 1 42 0 LOC102477328,LOC102503427
SE_02_113301069 chr5:72586794-72625220 Sample_02_1133 Liver Hepatic stellate cells 1069 4 893 47 3 119 0 LOC102477328,LOC102503427
SE_02_060500714 chr5:72586825-72634945 Sample_02_0605 Skin Skin Fibroblast_DMSO 714 12 1111 71 6 124 0 LOC102477328,LOC102503427
SE_02_157100688 chr5:72586829-72634896 Sample_02_1571 Fibroblast Fibroblast cells 688 8 1111 71 6 124 0 LOC102477328,LOC102503427
SE_02_047400283 chr5:72586831-72625011 Sample_02_0474 Fibroblast umbilical cord Fibroblast 283 5 887 47 3 119 0 LOC102477328,LOC102503427
SE_02_060600822 chr5:72586884-72635040 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 822 12 1111 71 6 124 0 LOC102477328,LOC102503427
SE_02_135500332 chr5:72586949-72634435 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 332 6 1098 68 6 124 0 LOC102477328,LOC102503427
SE_02_135600202 chr5:72587214-72634459 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 202 5 1095 68 6 123 0 LOC102477328,LOC102503427
SE_02_062000337 chr5:72587273-72605904 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 337 7 428 13 0 41 0 LOC102477328,LOC102503427
SE_02_127200270 chr5:72587856-72625123 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 270 12 873 47 3 118 0 LOC102477328,LOC102503427
SE_02_137700699 chr5:72587974-72605152 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 699 6 399 10 0 41 0 LOC102477328,LOC102503427
SE_02_124100602 chr5:72587980-72629561 Sample_02_1241 Skin MCC26_virus_negative 602 8 962 59 3 119 0 LOC102477328,LOC102503427,ZNF366
SE_02_156400118 chr5:72589272-72634556 Sample_02_1564 Gastrointestinal Stromal GIST-430 118 19 1060 70 6 118 0 LOC102477328,LOC102503427
SE_02_147800667 chr5:72595582-72612127 Sample_02_1478 Bone EW-3 667 5 411 20 1 62 0 LOC102477328,LOC102503427
SE_02_151600436 chr5:72595905-72606166 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 436 5 246 10 1 22 0 LOC102477328,LOC102503427
SE_02_102300096 chr5:72596109-72611153 Sample_02_1023 Mammary gland SUM159_BRD7_KO 96 4 377 19 1 43 0 LOC102477328,LOC102503427
SE_02_151500639 chr5:72596289-72606495 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 639 1 248 11 1 20 0 LOC102477328,LOC102503427
SE_02_127100451 chr5:72596471-72625795 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 451 5 697 43 3 98 0 LOC102477328,LOC102503427
SE_02_108500872 chr5:72596636-72602377 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 872 1 137 4 0 2 0 LOC102477328,LOC102503427,ZNF366
SE_02_102000373 chr5:72596681-72605089 Sample_02_1020 Mammary gland SUM159 373 3 206 6 0 20 0 LOC102477328,LOC102503427
SE_02_102100302 chr5:72596698-72619410 Sample_02_1021 Mammary gland SUM159R 302 4 561 34 2 72 0 LOC102477328,LOC102503427
SE_02_137901103 chr5:72596745-72601220 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 1103 2 101 2 0 2 0 LOC102477328,LOC102503427
SE_02_137400533 chr5:72596750-72605124 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 533 9 203 6 0 20 0 LOC102477328,LOC102503427
SE_02_137800753 chr5:72596764-72611293 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 753 5 359 19 1 41 0 LOC102477328,LOC102503427
SE_02_113701293 chr5:72596777-72602908 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 1293 1 147 4 0 2 0 LOC102477328,LOC102503427
SE_02_141800646 chr5:72596873-72602439 Sample_02_1418 Brain SF9427 646 1 131 4 0 2 0 LOC102477328,LOC102503427
SE_02_063600325 chr5:72596941-72635163 Sample_02_0636 Skin BJ5ta 325 8 897 67 6 102 0 LOC102477328,LOC102503427
SE_02_093600812 chr5:72596991-72601399 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 812 1 101 2 0 2 0 LOC102477328,LOC102503427
SE_02_150600203 chr5:72597021-72655338 Sample_02_1506 Brain SHEP with tetracycline inducible MYC_DOX_6HR 203 17 1351 99 8 102 0 LOC102477328,LOC102503427
SE_02_093800897 chr5:72597054-72601399 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 897 1 101 2 0 2 0 LOC102477328,LOC102503427
SE_02_061001375 chr5:72597118-72626411 Sample_02_0610 Liposarcoma MLS 1765-92 1375 3 701 43 3 98 0 LOC102477328,LOC102503427
SE_02_153400401 chr5:72597158-72602558 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 401 1 128 3 0 2 0 LOC102477328,LOC102503427
SE_02_072701133 chr5:72597166-72603221 Sample_02_0727 Fetal lung IMR90_Etoposide 1133 3 147 3 0 2 0 LOC102477328,LOC102503427
SE_02_062100091 chr5:72597554-72605378 Sample_02_0621 Aortic Aortic Endothelial Cells_UF 91 6 187 6 0 20 0 LOC102477328,LOC102503427
SE_02_154300135 chr5:72602383-72630912 Sample_02_1543 Gastrointestinal Stromal GIST-48 135 4 666 51 4 99 0 LOC102477328,LOC102503427
Genomic distribution of SEs associated with LOC102503427
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC102503427

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)