Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_156400130 chr1:109151396-109198497 47101 130 16 1301 143 3 143 1499 KIAA1324,SARS,C1ORF194
SE_02_156400192 chr1:116357079-116377883 20804 192 12 489 7 1 90 550 ATP1A1,ATP1A1-AS1
SE_02_156400061 chr1:119627213-119663212 35999 61 14 852 53 2 86 110 ZNF697,PHGDH,LINC00622
SE_02_156400088 chr1:15155096-15214547 59451 88 10 1777 271 7 88 64 TMEM51,C1ORF195,TMEM51-AS1,FHAD1
SE_02_156400120 chr1:156105413-156130398 24985 120 5 613 63 3 200 594 LMNA,RAB25,SEMA4A,MEX3A
SE_02_156400191 chr1:156657204-156668331 11127 191 9 294 15 1 67 518 BCAN,CRABP2,HAPLN2,NES
SE_02_156400078 chr1:157996403-158025398 28995 78 15 739 19 5 124 0 KIRREL
SE_02_156400074 chr1:167652187-167686927 34740 74 17 1100 49 3 69 160 RCSD1,MPZL1
SE_02_156400010 chr1:168439158-168521700 82542 10 28 2396 105 4 108 0 LOC101928565,LOC100505918,XCL2
SE_02_156400040 chr1:168574398-168614507 40109 40 16 1295 81 6 135 237 XCL1,XCL2
SE_02_156400222 chr1:181089948-181105231 15283 222 9 423 27 1 149 151 IER5
SE_02_156400011 chr1:183806151-183916059 109908 11 43 2999 143 13 378 725 RGL1
SE_02_156400048 chr1:19347124-19367380 20256 48 10 676 89 2 39 450 CAPZB,PQLC2,AKR7A2
SE_02_156400160 chr1:201634027-201656617 22590 160 12 625 12 1 125 718 NAV1
SE_02_156400096 chr1:205581685-205603602 21917 96 14 605 88 2 62 1069 MFSD4,ELK4,LOC284578
SE_02_156400129 chr1:222998467-223032689 34222 129 13 1064 81 0 89 443 DISP1,TLR5
SE_02_156400108 chr1:223062062-223087820 25758 108 15 727 40 0 83 0 TLR5
SE_02_156400243 chr1:234715452-234727636 12184 243 5 355 20 3 68 201 LINC01132
SE_02_156400024 chr1:234956756-235024374 67618 24 18 2074 66 6 240 308 LOC101927851,LINC01348
SE_02_156400038 chr1:23545196-23592813 47617 38 11 1434 65 2 232 557 ID3,E2F2,LOC101928163,MDS2
SE_02_156400176 chr1:24009610-24022475 12865 176 10 16 36 1 9 0 PNRC2,SRSF10
SE_02_156400205 chr1:54312599-54336632 24033 205 11 691 12 4 115 0 SSBP3
SE_02_156400006 chr1:8363426-8467565 104139 6 55 2690 127 31 209 872 RERE,LOC102724552,SLC45A1
SE_02_156400241 chr10:101222852-101231646 8794 241 3 202 6 3 216 619 LBX1-AS1,LBX1,LINC01514,LOC101927419
SE_02_156400032 chr10:102595522-102646860 51338 32 9 1162 123 22 471 1865 SUFU,TRIM8
SE_02_156400188 chr10:121614333-121633709 19376 188 11 621 18 1 73 0 FGFR2
SE_02_156400137 chr10:126035984-126062670 26686 137 14 858 133 10 75 642 ADAM12,FANK1-AS1
SE_02_156400211 chr10:126080756-126115553 34797 211 13 1053 36 4 142 293 ADAM12,FANK1-AS1
SE_02_156400104 chr10:126336365-126391651 55286 104 15 1527 19 2 163 225 ADAM12,LINC00601
SE_02_156400219 chr10:60895456-60922900 27444 219 14 835 26 2 72 280 RHOBTB1
SE_02_156400072 chr10:6720526-6747345 26819 72 10 867 38 2 57 0 LINC00706,LINC00707
SE_02_156400164 chr10:7471603-7515817 44214 164 16 1483 98 6 35 0 SFMBT2
SE_02_156400015 chr10:86734677-86816855 82178 15 42 2252 214 3 108 355 BMPR1A,LDB3
SE_02_156400202 chr10:99905883-99933151 27268 202 6 693 93 0 38 537 DNMBP-AS1,DNMBP
SE_02_156400077 chr10:99957540-100009642 52102 77 19 1369 178 0 54 221 DNMBP-AS1,DNMBP
SE_02_156400054 chr11:10573575-10608336 34761 54 18 934 83 1 131 1227 MRVI1,MRVI1-AS1,LYVE1,RNF141
SE_02_156400133 chr11:10648456-10675836 27380 133 20 794 83 4 84 126 MRVI1
SE_02_156400245 chr11:122715303-122743617 28314 245 7 840 60 5 87 48 UBASH3B
SE_02_156400114 chr11:123183364-123219820 36456 114 15 1114 30 3 95 209 CLMP
SE_02_156400172 chr11:17798166-17829848 31682 172 12 787 44 2 92 0 SERGEF,KCNC1
SE_02_156400216 chr11:310266-329513 19247 216 5 562 86 1 9 944 IFITM3,IFITM1,ATHL1,B4GALNT4,IFITM5,NLRP6,IFITM2
SE_02_156400107 chr11:35076615-35117069 40454 107 16 1208 91 3 88 0 LOC100507144,CD44
SE_02_156400217 chr11:65416894-65430069 13175 217 11 387 15 2 37 1036 NEAT1,SLC25A45,FRMD8,MIR612
SE_02_156400059 chr11:65471753-65505793 34040 59 15 982 106 4 50 875 MALAT1,SCYL1,NEAT1,MIR612
SE_02_156400123 chr11:67357210-67381737 24527 123 9 587 47 1 264 895 CLCF1,LOC100130987,RAD9A,PPP1CA,TBC1D10C,POLD4,CARNS1,RPS6KB2
SE_02_156400014 chr11:69906990-69964186 57196 14 17 689 103 0 23 0 FGF3
SE_02_156400140 chr11:69984572-70018239 33667 140 17 1194 43 3 67 0 LOC101928443
SE_02_156400148 chr11:73312167-73335473 23306 148 14 650 78 5 120 0 ARHGEF17,P2RY6,RELT
SE_02_156400018 chr11:96199650-96259863 60213 18 25 1681 42 11 217 0 MAML2,MIR1260B
SE_02_156400226 chr11:96337863-96343207 5344 226 1 134 3 0 99 304 MIR1260B,MAML2,JRKL,CCDC82
SE_02_156400156 chr12:105657433-105682989 25556 156 7 699 6 1 76 0 CASC18
SE_02_156400017 chr12:108822959-108864421 41462 17 19 1103 51 2 50 457 SSH1,MIR619,DAO
SE_02_156400053 chr12:123986403-124032326 45923 53 12 1188 94 13 67 517 ZNF664,ZNF664-FAM101A,CCDC92
SE_02_156400166 chr12:124904452-124941591 37139 166 9 1284 49 4 71 1108 MIR5188,UBC,SCARB1,DHX37
SE_02_156400232 chr12:127925336-127946498 21162 232 9 695 8 1 4 96 LINC00507,LINC00508,FLJ37505,CRAT8
SE_02_156400111 chr12:68436129-68463081 26952 111 7 757 52 5 91 0 LOC100507195
SE_02_156400128 chr12:68611284-68613260 1976 128 1 54 2 0 30 0 RAP1B,SNORA70G
SE_02_156400240 chr12:69497043-69515754 18711 240 3 448 48 0 18 0 FRS2
SE_02_156400200 chr12:76680657-76708662 28005 200 13 792 50 4 13 0 ZDHHC17
SE_02_156400050 chr12:89305527-89351541 46014 50 17 1133 68 1 250 280 DUSP6
SE_02_156400182 chr12:92537528-92562758 25230 182 12 748 48 0 78 0 CLLU1OS,CLLU1
SE_02_156400013 chr13:33168799-33231470 62671 13 27 1766 122 14 167 131 STARD13,STARD13-AS
SE_02_156400035 chr13:35690846-35730723 39877 35 12 1227 21 3 141 0 LINC00445
SE_02_156400033 chr13:95220727-95300806 80079 33 22 2291 281 11 75 309 ABCC4
SE_02_156400064 chr14:24933080-24986742 53662 64 21 1421 124 2 93 44 STXBP6
SE_02_156400052 chr14:32457374-32514349 56975 52 22 1607 27 5 107 35 AKAP6
SE_02_156400012 chr14:68586976-68686358 99382 12 48 2731 144 9 479 264 RAD51B,ZFP36L1
SE_02_156400212 chr14:73728624-73763242 34618 212 10 867 113 1 235 1215 ELMSAN1,MIR4505,PNMA1,LOC100506476
SE_02_156400171 chr14:75334433-75373442 39009 171 12 1072 54 1 99 0 LINC01220
SE_02_156400173 chr14:75428716-75455707 26991 173 10 816 36 1 152 253 JDP2
SE_02_156400030 chr15:37087179-37113587 26408 30 12 629 5 0 454 790 MEIS2
SE_02_156400141 chr15:41918964-41969752 50788 141 12 1396 149 6 163 512 EHD4,EHD4-AS1,SPTBN5,PLA2G4E-AS1
SE_02_156400029 chr15:65321648-65356838 35190 29 23 922 56 0 257 1689 IGDCC3,RNU5B-1,PARP16,RNU5A-1
SE_02_156400067 chr15:66693427-66758850 65423 67 20 1830 58 6 308 811 SMAD6
SE_02_156400092 chr16:11078042-11100758 22716 92 10 749 65 26 76 0 CLEC16A
SE_02_156400214 chr16:11312025-11329828 17803 214 8 672 95 6 16 245 PRM2,TNP2,PRM1,PRM3,RMI2,MIR548H2
SE_02_156400234 chr16:11349007-11357923 8916 234 3 323 48 1 23 138 RMI2,MIR548H2
SE_02_156400159 chr16:11780525-11795387 14862 159 8 512 39 2 11 97 ZC3H7A,BCAR4,TXNDC11
SE_02_156400206 chr16:19118726-19141140 22414 206 4 648 25 0 42 360 ITPRIPL2,SYT17
SE_02_156400167 chr16:3939745-3961924 22179 167 8 861 68 5 27 0 LOC102724927
SE_02_156400081 chr16:85553695-85584283 30588 81 15 1077 5 0 221 0 GSE1
SE_02_156400112 chr16:86137314-86164467 27153 112 8 1249 2 11 42 0 LINC01082
SE_02_156400223 chr16:86239365-86261244 21879 223 9 1099 14 5 45 0 LINC01081,LINC01082,LOC146513
SE_02_156400036 chr16:86282097-86318143 36046 36 11 1348 7 3 34 498 LINC01081,LOC146513,LINC00917
SE_02_156400023 chr16:86395554-86437008 41454 23 17 2047 25 13 0 0 LINC00917
SE_02_156400009 chr16:86454461-86520695 66234 9 32 2963 157 14 0 1656 FENDRR,FOXF1,FOXC2-AS1,FOXC2,MTHFSD,FLJ30679
SE_02_156400152 chr17:1780060-1797650 17590 152 5 552 77 1 60 777 SMYD4,SERPINF1,SERPINF2,RPA1
SE_02_156400138 chr17:2059068-2067571 8503 138 6 240 24 0 127 988 HIC1,SMG6,DPH1,RTN4RL1,MIR132,MIR212,OVCA2
SE_02_156400179 chr17:2083399-2103521 20122 179 5 582 59 3 170 402 SMG6,HIC1,MIR132,MIR212,OVCA2
SE_02_156400109 chr17:2171532-2192901 21369 109 8 571 68 3 323 246 SMG6,LOC101927839
SE_02_156400194 chr17:2230502-2246351 15849 194 6 412 34 4 165 251 LOC101927839,SMG6
SE_02_156400227 chr17:2259786-2268306 8520 227 4 201 30 1 52 68 SMG6,LOC101927839,SRR
SE_02_156400115 chr17:48787069-48805365 18296 115 11 471 30 6 80 1035 TTLL6,CALCOCO2
SE_02_156400049 chr17:510295-550319 40024 49 13 1222 126 4 113 1877 VPS53,FAM101B
SE_02_156400026 chr17:57505456-57554810 49354 26 23 1393 24 7 322 46 MSI2,LOC101927557
SE_02_156400117 chr17:57595843-57625732 29889 117 12 868 30 1 216 146 MSI2,LOC101927539
SE_02_156400170 chr17:57662022-57673323 11301 170 6 300 11 3 68 0 MSI2,LOC101927539
SE_02_156400142 chr17:594391-609556 15165 142 7 466 72 0 33 104 VPS53
SE_02_156400045 chr17:64706025-64742729 36704 45 15 960 46 0 94 0 SMURF2,LOC146880,MIR6080
SE_02_156400084 chr17:77460322-77480571 20249 84 9 607 6 0 38 231 SEPT9
SE_02_156400136 chr17:81387615-81404479 16864 136 8 561 39 1 297 274 BAHCC1,MIR4740,LOC100130370,MIR3186
SE_02_156400085 chr18:24934818-24989112 54294 85 17 1379 28 3 310 0 LOC729950
SE_02_156400244 chr18:2959701-2981430 21729 244 10 600 34 1 30 45 LPIN2,LOC727896
SE_02_156400089 chr18:45752088-45787403 35315 89 16 965 138 1 50 48 SLC14A1,SIGLEC15
SE_02_156400210 chr18:63131376-63150352 18976 210 12 528 7 6 46 0 BCL2
SE_02_156400195 chr18:70289764-70311552 21788 195 12 628 43 2 29 0 SOCS6,LOC101927481
SE_02_156400157 chr18:9092461-9113960 21499 157 9 559 43 1 2 158 NDUFV2,ANKRD12,NDUFV2-AS1
SE_02_156400154 chr19:1251399-1266101 14702 154 6 570 12 0 137 1229 MIDN,C19ORF24,CIRBP,CIRBP-AS1,ATP5D,STK11,CBARP,EFNA2
SE_02_156400229 chr19:13838561-13862216 23655 229 11 637 44 1 174 0 NANOS3,C19ORF57,LOC284454,MIR23A,ZSWIM4,MIR27A,MIR24-2,MIR181D,MIR181C,CC2D1A
SE_02_156400066 chr19:18364209-18381996 17787 66 6 521 45 3 6 1074 PGPEP1,MIR3189,LRRC25,LSM4,SSBP4,GDF15
SE_02_156400126 chr19:18415236-18426864 11628 126 5 308 17 1 33 212 SSBP4,GDF15,MIR3189,ISYNA1,LRRC25
SE_02_156400065 chr19:38649314-38686158 36844 65 18 1027 99 3 181 0 ACTN4,EIF3K,MAP4K1
SE_02_156400225 chr19:40416472-40434535 18063 225 7 489 38 1 91 388 SERTAD1,SPTBN4,PRX,MIR6796,SERTAD3,BLVRB,HIPK4
SE_02_156400060 chr2:100876059-100925588 49529 60 17 1439 59 4 78 118 NPAS2,LOC101927142
SE_02_156400007 chr2:105355333-105404986 49653 7 13 1388 117 1 118 1178 FHL2,TGFBRAP1,C2ORF49
SE_02_156400068 chr2:105426508-105458012 31504 68 11 1004 19 0 51 142 FHL2
SE_02_156400162 chr2:11367779-11392507 24728 162 9 789 63 1 85 0 LINC00570,ROCK2
SE_02_156400069 chr2:120722048-120772400 50352 69 16 1316 50 2 175 240 GLI2
SE_02_156400236 chr2:12151674-12178834 27160 236 8 921 10 7 68 48 LOC100506457,MIR3681
SE_02_156400094 chr2:12286654-12321420 34766 94 7 936 1 14 94 46 LOC100506457,MIR3681
SE_02_156400102 chr2:12717876-12742625 24749 102 7 700 32 4 244 607 MIR3125,TRIB2
SE_02_156400199 chr2:162059126-162089568 30442 199 13 837 31 2 53 286 DPP4,LOC101929532
SE_02_156400144 chr2:18432063-18453960 21897 144 13 603 2 3 105 0 RDH14
SE_02_156400228 chr2:18466573-18488309 21736 228 11 633 5 1 100 0 RDH14
SE_02_156400237 chr2:18513422-18522596 9174 237 5 270 2 1 79 0 RDH14
SE_02_156400091 chr2:19350826-19363026 12200 91 6 318 2 0 100 602 OSR1,MIR4757
SE_02_156400101 chr2:20576402-20618632 42230 101 15 1372 116 3 99 207 HS1BP3-IT1,HS1BP3,GDF7
SE_02_156400174 chr2:23433598-23481813 48215 174 12 1462 71 2 167 69 KLHL29
SE_02_156400183 chr2:237860232-237873618 13386 183 8 426 11 2 18 0 RAMP1
SE_02_156400058 chr2:3575491-3604200 28709 58 13 880 90 1 43 829 COLEC11,RPS7,RNASEH1-AS1,RNASEH1
SE_02_156400147 chr2:38092486-38116143 23657 147 7 785 96 2 62 0 CYP1B1-AS1,CYP1B1
SE_02_156400119 chr2:43333556-43376827 43271 119 15 1237 77 8 122 180 THADA,LINC01126
SE_02_156400158 chr2:54557138-54580533 23395 158 9 719 94 4 78 175 SPTBN1,RPL23AP32
SE_02_156400056 chr2:54617209-54674052 56843 56 23 1755 163 7 427 2748 SPTBN1,EML6
SE_02_156400139 chr2:66436470-66448024 11554 139 5 265 10 1 230 503 MEIS1-AS2,MEIS1,MEIS1-AS3
SE_02_156400051 chr2:85851392-85894195 42803 51 17 1069 156 6 49 750 ST3GAL5,ST3GAL5-AS1,LOC284950
SE_02_156400116 chr2:85972624-86011399 38775 116 10 1124 135 0 40 0 LOC90784
SE_02_156400242 chr2:86025916-86047657 21741 242 8 661 76 2 97 1697 POLR1A,LOC90784
SE_02_156400057 chr2:98682583-98728799 46216 57 16 1088 81 17 50 67 MGAT4A,LOC101927070
SE_02_156400177 chr20:31698546-31720222 21676 177 10 510 39 3 107 0 BCL2L1,TPX2,ABALON
SE_02_156400113 chr20:33813327-33843299 29972 113 13 736 37 7 51 0 CHMP4B,ZNF341-AS1
SE_02_156400185 chr20:36833636-36862136 28500 185 9 693 49 2 71 219 SOGA1,TLDC2
SE_02_156400204 chr20:47348383-47361329 12946 204 6 300 2 3 138 732 ZMYND8,LOC100131496
SE_02_156400149 chr20:4916084-4950358 34274 149 17 959 36 2 14 69 SLC23A2
SE_02_156400215 chr21:31890280-31912350 22070 215 13 643 5 1 45 0 HUNK
SE_02_156400071 chr21:38806417-38851400 44983 71 21 1194 148 1 115 799 ETS2,LINC00114,LOC101928398
SE_02_156400106 chr22:33806039-33865173 59134 106 18 1948 145 16 62 43 LARGE
SE_02_156400028 chr3:100033376-100111079 77703 28 24 1784 104 5 255 191 FILIP1L,CMSS1
SE_02_156400063 chr3:101849774-101873799 24025 63 13 543 41 2 111 730 NFKBIZ
SE_02_156400099 chr3:102078593-102116936 38343 99 14 1012 16 0 64 88 LOC152225
SE_02_156400208 chr3:102163064-102184319 21255 208 7 552 8 2 38 0 LOC152225
SE_02_156400122 chr3:120416984-120450274 33290 122 17 874 94 4 118 0 FSTL1,MIR198
SE_02_156400197 chr3:129004792-129027026 22234 197 7 599 38 0 26 0 EFCC1,GP9,KIAA1257
SE_02_156400090 chr3:141401664-141443646 41982 90 13 1056 37 15 114 456 ZBTB38,RASA2
SE_02_156400110 chr3:156675751-156707852 32101 110 23 693 57 5 227 501 TIPARP,TIPARP-AS1
SE_02_156400169 chr3:156814689-156828550 13861 169 7 353 60 2 63 408 LEKR1,LINC00886,PA2G4P4
SE_02_156400131 chr3:157076212-157105523 29311 131 11 778 63 8 145 613 LINC00880,LINC00881
SE_02_156400190 chr3:172124706-172154250 29544 190 14 770 9 3 122 33 FNDC3B
SE_02_156400042 chr3:71034658-71083758 49100 42 27 1175 5 4 736 373 FOXP1
SE_02_156400135 chr3:71872426-71913113 40687 135 14 1259 51 9 102 0 PROK2,EIF4E3
SE_02_156400231 chr3:89103697-89128379 24682 231 8 657 21 0 126 121 EPHA3
SE_02_156400124 chr4:1184104-1203139 19035 124 6 626 56 0 14 1058 LOC100130872,SPON2,CTBP1,CTBP1-AS,CTBP1-AS2
SE_02_156400075 chr4:13557401-13601761 44360 75 17 1140 40 1 0 921 BOD1L1,MIR5091,LINC01096,LINC01097,NKX3-2
SE_02_156400005 chr4:16021748-16091598 69850 5 37 1961 137 7 72 627 PROM1
SE_02_156400230 chr4:16194311-16225396 31085 230 7 885 109 0 62 61 TAPT1,TAPT1-AS1
SE_02_156400098 chr4:24850712-24878481 27769 98 7 803 20 4 93 143 CCDC149
SE_02_156400080 chr4:24983475-25014814 31339 80 16 951 76 6 94 727 LGI2,CCDC149
SE_02_156400175 chr4:26785982-26806611 20629 175 6 531 5 1 48 0 STIM2
SE_02_156400100 chr4:26858003-26884769 26766 100 13 696 48 4 100 265 STIM2
SE_02_156400209 chr4:3106923-3135577 28654 209 8 757 60 6 84 704 HTT,HTT-AS
SE_02_156400019 chr4:54365939-54434642 68703 19 40 2002 33 28 194 0 PDGFRA
SE_02_156400193 chr4:54658897-54676985 18088 193 11 537 2 1 63 0 KIT
SE_02_156400189 chr4:98546589-98582546 35957 189 14 915 57 2 85 0 TSPAN5
SE_02_156400181 chr5:1090331-1109916 19585 181 14 727 78 1 11 218 SLC12A7,MIR4635
SE_02_156400039 chr5:132411054-132448484 37430 39 23 929 102 17 76 208 C5ORF56,SLC22A5,IRF1,LOC553103,MIR3936
SE_02_156400055 chr5:132463808-132506595 42787 55 16 1104 171 23 215 1413 C5ORF56,IRF1,IL5
SE_02_156400201 chr5:135307763-135330222 22459 201 12 603 24 3 65 0 C5ORF66,C5ORF66-AS2
SE_02_156400132 chr5:14145595-14209007 63412 132 17 1713 76 7 125 67 TRIO
SE_02_156400155 chr5:142315361-142322413 7052 155 1 176 4 0 48 76 SPRY4,SPRY4-IT1,LOC101926941
SE_02_156400003 chr5:142354071-142467808 113737 3 35 3124 247 6 242 71 LOC101926941,SPRY4,SPRY4-IT1
SE_02_156400086 chr5:142486519-142514123 27604 86 11 739 9 2 138 35 FGF1
SE_02_156400020 chr5:142532098-142610818 78720 20 24 2141 58 11 270 466 FGF1
SE_02_156400168 chr5:14430941-14450393 19452 168 9 562 8 1 58 0 TRIO,FAM105A
SE_02_156400083 chr5:149406982-149416920 9938 83 1 287 28 1 27 982 MIR143HG,MIR143,PCYOX1L,GRPEL2-AS1,IL17B,MIR145
SE_02_156400221 chr5:150778991-150790946 11955 221 7 290 41 0 34 29 SMIM3,DCTN4
SE_02_156400220 chr5:151679058-151700036 20978 220 9 553 44 3 57 534 CTB-113P19.1,SPARC
SE_02_156400070 chr5:154467470-154487085 19615 70 9 500 27 2 171 451 HAND1,SAP30L,SAP30L-AS1
SE_02_156400105 chr5:17359243-17402876 43633 105 13 1210 105 2 73 378 LOC401177
SE_02_156400198 chr5:18733395-18746951 13556 198 7 318 0 1 3 0
SE_02_156400044 chr5:33299425-33340730 41305 44 20 1125 88 1 103 0 TARS
SE_02_156400093 chr5:33359223-33380391 21168 93 11 551 39 1 28 0 TARS
SE_02_156400184 chr5:33400786-33422594 21808 184 14 577 46 1 31 0 TARS
SE_02_156400021 chr5:371406-415415 44009 21 15 1409 176 3 33 141 AHRR,EXOC3-AS1,EXOC3
SE_02_156400031 chr5:67209392-67270348 60956 31 25 1780 30 4 171 0 CD180
SE_02_156400218 chr5:72503953-72525991 22038 218 9 624 43 4 92 65 ZNF366,LOC102503427
SE_02_156400118 chr5:72589272-72634556 45284 118 19 1060 70 6 118 0 LOC102477328,LOC102503427
SE_02_156400163 chr5_KI270792v1_alt:110851-128940 18089 163 11 0 0 0 0 0 SLC12A7
SE_02_156400076 chr6:110323139-110357901 34762 76 16 942 73 5 69 27 METTL24
SE_02_156400151 chr6:111585209-111606359 21150 151 9 550 75 5 105 861 TRAF3IP2,TRAF3IP2-AS1
SE_02_156400022 chr6:13371606-13466051 94445 22 31 2593 160 8 149 77 GFOD1,TBC1D7
SE_02_156400150 chr6:133730098-133769204 39106 150 19 960 25 2 125 91 TARID,LINC01312
SE_02_156400233 chr6:133886909-133895765 8856 233 5 218 17 3 78 786 TCF21,TARID
SE_02_156400047 chr6:137767996-137824515 56519 47 19 1649 60 9 114 96 LOC100130476,LOC100507406,TNFAIP3
SE_02_156400121 chr6:137847512-137874464 26952 121 12 665 19 4 0 571 TNFAIP3,LOC100130476
SE_02_156400027 chr6:143673110-143709235 36125 27 13 975 70 4 135 181 PHACTR2
SE_02_156400203 chr6:41053260-41075242 21982 203 6 543 53 4 141 1136 OARD1,APOBEC2,NFYA,LOC101929555,TSPO2,ADCY10P1,UNC5CL
SE_02_156400213 chr6:41640184-41657404 17220 213 8 580 9 2 84 555 MDFI,MIR4641
SE_02_156400235 chr6:44226660-44249242 22582 235 5 727 60 2 91 1454 SLC29A1,HSP90AB1,SLC35B2,TMEM151B,TCTE1,NFKBIE,MIR4647
SE_02_156400016 chr6:44402887-44457081 54194 16 18 1352 84 3 196 775 CDC5L,MIR4642
SE_02_156400127 chr6:56707332-56758802 51470 127 16 1274 75 1 66 56 DST
SE_02_156400145 chr7:130354861-130375264 20403 145 9 569 60 3 96 869 CPA5,CPA1
SE_02_156400125 chr7:130887460-130922112 34652 125 11 1076 63 4 119 118 LOC100506860,LINC-PINT,MIR29A,MIR29B1
SE_02_156400002 chr7:139644695-139777468 132773 2 72 3441 140 16 529 215 HIPK2,TBXAS1
SE_02_156400034 chr7:13979765-13991361 11596 34 5 340 0 3 177 470 ETV1
SE_02_156400207 chr7:16561868-16566049 4181 207 2 117 8 0 30 0 LRRC72
SE_02_156400004 chr7:16905173-17010079 104906 4 33 3546 175 14 145 0 AGR3
SE_02_156400062 chr7:17300724-17331077 30353 62 10 744 20 1 54 164 AHR,KCCAT333
SE_02_156400001 chr7:22110840-22226783 115943 1 56 3136 170 9 431 1215 RAPGEF5
SE_02_156400087 chr7:22560654-22590576 29922 87 10 783 31 5 47 491 LOC100506178
SE_02_156400153 chr7:23182051-23196770 14719 153 4 427 56 0 18 340 NUPL2,GPNMB
SE_02_156400224 chr7:28060624-28078266 17642 224 12 473 10 1 89 0 JAZF1,JAZF1-AS1
SE_02_156400134 chr7:66741639-66782679 41040 134 11 1182 151 5 23 274 RABGEF1
SE_02_156400238 chr8:103338008-103353115 15107 238 8 424 65 2 21 0 FZD6,CTHRC1
SE_02_156400196 chr8:115436168-115455818 19650 196 9 464 4 1 198 0 TRPS1
SE_02_156400178 chr8:129682331-129709011 26680 178 9 743 58 1 89 0 CCDC26
SE_02_156400103 chr8:129971527-130000691 29164 103 6 786 56 4 70 0 FAM49B,MIR5194
SE_02_156400143 chr8:133110812-133130901 20089 143 7 647 33 3 23 170 TG,SLA
SE_02_156400079 chr8:141352127-141380501 28374 79 13 1034 74 4 90 493 GPR20,LINC01300,PTP4A3
SE_02_156400043 chr8:27895244-27960584 65340 43 26 2039 208 9 187 523 SCARA5,MIR4287
SE_02_156400008 chr8:30422289-30548660 126371 8 61 3215 211 9 197 526 RBPMS,RBPMS-AS1
SE_02_156400146 chr8:37010990-37045861 34871 146 12 1012 43 0 135 0 KCNU1
SE_02_156400041 chr8:42169048-42209695 40647 41 20 1186 88 2 88 1581 AP3M2,PLAT
SE_02_156400187 chr8:42264314-42278220 13906 187 5 367 23 1 15 233 LOC101929897,IKBKB
SE_02_156400037 chr8:56521945-56562848 40903 37 19 1182 61 1 55 336 LOC101929415,LINC00968
SE_02_156400165 chr8:71828246-71858040 29794 165 8 829 72 6 65 622 MSC-AS1,MSC
SE_02_156400239 chr8:71946222-71963158 16936 239 13 442 29 0 39 47 MSC-AS1,MSC
SE_02_156400073 chr8:76673080-76699045 25965 73 13 600 18 3 508 221 ZFHX4-AS1,ZFHX4
SE_02_156400097 chr8:89967950-89984088 16138 97 8 450 35 1 34 231 NBN,DECR1
SE_02_156400186 chr8:95099390-95114386 14996 186 4 414 47 2 11 0 PLEKHF2,MIR3150B,MIR3150A
SE_02_156400095 chr8_KI270819v1_alt:17943-47294 29351 95 14 0 0 0 0 0 GPR20
SE_02_156400025 chr9:124258496-124306570 48074 25 18 1418 114 4 252 403 NEK6,LOC100129034
SE_02_156400046 chr9:127828173-127863681 35508 46 12 1016 74 3 0 730 ENG,ST6GALNAC6,SH2D3C,CDK9,MIR4672,MIR3960,FPGS,MIR2861,AK1
SE_02_156400082 chr9:134205224-134228015 22791 82 9 792 8 5 76 0 RNU6ATAC
SE_02_156400246 chr9:68953366-68982188 28822 246 9 786 49 0 76 528 LOC101927069,PIP5K1B,PRKACG
SE_02_156400180 chr9:7367488-7402909 35421 180 16 1555 14 10 80 0 TMEM261
SE_02_156400161 chrX:136144090-136176433 32343 161 12 569 24 0 144 523 FHL1

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM2527256
Input ID: Name:GSM2527257
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb