SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID:
Gene: LOC100132057 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_125400101 chr1:148357447-148374202 Sample_02_1254 Bladder Bladder tumor Basal1 101 5 91 28 0 0 293 RNVU1-1,LOC100132057,MIR6077,RNVU1-3,RNU1-13P,MIR5087
SE_02_077600392 chr1:148440368-148462741 Sample_02_0776 Pancreas EndoC-BH1 392 7 69 18 0 117 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_077501313 chr1:148441468-148468227 Sample_02_0775 Pancreas EndoC-BH1_SE 1313 11 80 23 0 111 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_052300134 chr1:148441595-148460153 Sample_02_0523 Lung NCIH810 134 6 62 13 0 111 564 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_068800190 chr1:148441923-148461089 Sample_02_0688 Lung NCI-H211_no infection 190 12 66 11 0 111 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_122500412 chr1:148441951-148460964 Sample_02_1225 Bone marrow RAJI 412 16 66 11 0 111 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_151100238 chr1:148443423-148461445 Sample_02_1511 Lung H3122_untreated 238 6 57 11 0 111 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_108600932 chr1:148443634-148460701 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 932 7 57 11 0 107 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_052200322 chr1:148443660-148466436 Sample_02_0522 Colon SW620 322 12 68 18 0 107 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_056700082 chr1:148443712-148463349 Sample_02_0567 Mammary gland MCF7L-P_TAMR 82 12 63 13 0 107 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_152400290 chr1:148444563-148460917 Sample_02_1524 Lung H3122 DMSO 290 3 55 11 0 92 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_049400980 chr1:148444707-148460828 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 980 3 55 11 0 86 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_064500792 chr1:148444757-148461257 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 792 2 53 11 0 86 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_065000229 chr1:148444854-148461369 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 229 3 53 11 0 86 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_064700904 chr1:148444922-148460923 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 904 3 52 11 0 86 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_065200933 chr1:148445166-148460885 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 933 2 52 11 0 86 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_064600552 chr1:148445292-148460993 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 552 2 52 11 0 86 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_136500951 chr1:148445995-148461321 Sample_02_1365 Pancreas AsPC1-untreated 951 4 45 11 0 85 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_066400483 chr1:148451440-148466886 Sample_02_0664 Prostate LNCaP_DMSO 483 6 27 15 0 76 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_00_004700187 chr1:148451939-148461380 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 187 4 10 8 0 76 581 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
Genomic distribution of SEs associated with LOC100132057
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC100132057

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)