Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_052300026 chr1:10658039-10774692 116653 26 36 3613 101 18 1555 1396 CASZ1
SE_02_052300075 chr1:109114045-109161731 47686 75 17 1255 150 2 73 100 KIAA1324,SCARNA2,C1ORF194,TAF13,TMEM167B
SE_02_052300091 chr1:10937264-10974235 36971 91 8 1182 105 5 237 1369 C1ORF127,TARDBP
SE_02_052300074 chr1:120268536-120309186 40650 74 12 0 12 0 40 0 SEC22B
SE_02_052300219 chr1:120323851-120360246 36395 219 11 359 62 0 122 147 PFN1P2
SE_02_052300077 chr1:120588643-120628628 39985 77 15 0 2 0 0 0 NBPF8
SE_02_052300226 chr1:120912952-120940555 27603 226 6 161 26 0 4 70 LINC00623,PPIAL4A,RNVU1-4
SE_02_052300157 chr1:145197687-145216150 18463 157 4 13 1 0 83 178 LOC103091866
SE_02_052300176 chr1:147599060-147641536 42476 176 8 1016 100 6 457 1501 BCL9,ACP6
SE_02_052300134 chr1:148441595-148460153 18558 134 6 62 13 0 111 564 LINC01138,LOC100132057,PPIAL4G,RNVU1-3
SE_02_052300044 chr1:148879784-148921322 41538 44 12 129 23 2 106 231 PDE4DIP,LOC653513
SE_02_052300106 chr1:149157594-149194090 36496 106 9 1 53 0 115 541 NBPF9
SE_02_052300046 chr1:149208443-149250471 42028 46 16 484 5 0 0 0 NBPF9
SE_02_052300056 chr1:149607016-149639490 32474 56 8 9 47 0 146 712 LINC00869,PPIAL4C
SE_02_052300186 chr1:149884081-149889215 5134 186 1 128 4 0 66 509 HIST2H2AB,HIST2H2AC,HIST2H2BE,BOLA1,MTMR11,HIST2H2AA3,HIST2H2BC,HIST2H3A,SV2A,HIST2H2AA4,SF3B4,HIST2H3C
SE_02_052300307 chr1:150559707-150580726 21019 307 7 560 55 4 93 1001 ADAMTSL4,MCL1,ADAMTSL4-AS1,ENSA,FALEC,MIR4257
SE_02_052300192 chr1:151538221-151548180 9959 192 2 258 29 0 34 259 CGN,TUFT1,MIR554
SE_02_052300217 chr1:153564065-153572876 8811 217 3 239 15 0 52 168 S100A2,S100A6,S100A4,S100A5,S100A3,S100A14,LOC101928034,S100A16
SE_02_052300058 chr1:156096856-156139546 42690 58 10 1043 109 5 348 1792 LMNA,LAMTOR2,RAB25,UBQLN4,SEMA4A,MEX3A
SE_02_052300032 chr1:156456097-156506756 50659 32 10 1307 58 10 429 2339 MEF2D,C1ORF61,MIR9-1
SE_02_052300263 chr1:157356826-157362293 5467 263 1 188 13 3 0 0 FCRL5,ETV3
SE_02_052300304 chr1:162854574-162875602 21028 304 6 617 70 3 27 366 C1ORF110
SE_02_052300213 chr1:163458398-163475987 17589 213 6 513 0 3 121 34 LOC100422212
SE_02_052300173 chr1:164610989-164672705 61716 173 15 1706 20 8 587 315 PBX1
SE_02_052300239 chr1:165827481-165889224 61743 239 17 1724 62 2 109 165 UCK2,MIR3658
SE_02_052300159 chr1:16881300-16928490 47190 159 7 1747 180 1 27 609 CROCC,RNVU1-18
SE_02_052300095 chr1:17549981-17606562 56581 95 20 1727 43 2 16 966 ARHGEF10L
SE_02_052300270 chr1:175808484-175843247 34763 270 9 892 2 0 137 0 LOC101928751
SE_02_052300036 chr1:182599615-182636514 36899 36 9 994 71 6 178 875 RGS16,LOC284648,RGS8,RNASEL
SE_02_052300102 chr1:184450287-184520884 70597 102 18 1743 86 7 152 91 C1ORF21
SE_02_052300067 chr1:202000010-202088776 88766 67 23 2471 145 7 143 2052 RNPEP,ELF3,MIR6740,GPR37L1,TIMM17A
SE_02_052300185 chr1:203273278-203292804 19526 185 9 542 53 0 47 0 LINC01353,CHIT1,LINC01136,BTG2
SE_02_052300183 chr1:203319801-203329460 9659 183 1 249 14 1 66 0 LINC01353,LINC01136,BTG2,FMOD
SE_02_052300138 chr1:204075140-204121595 46455 138 21 1299 36 4 146 971 SOX13,LINC00303,ETNK2,REN,LOC101929441
SE_02_052300196 chr1:206672571-206717397 44826 196 15 1124 50 4 147 600 MAPKAPK2,DYRK3
SE_02_052300177 chr1:208119343-208207751 88408 177 29 2573 121 8 461 85 PLXNA2
SE_02_052300301 chr1:21013597-21028845 15248 301 12 387 37 1 0 0 EIF4G3,MIR1256
SE_02_052300090 chr1:212463346-212520863 57517 90 18 1579 188 0 75 0 LOC101929565,NENF,ATF3,TMEM206
SE_02_052300215 chr1:213976108-214052471 76363 215 24 1806 37 8 837 1049 PROX1-AS1,PROX1
SE_02_052300317 chr1:223737212-223783525 46313 317 14 1296 135 4 116 1820 TP53BP2,CAPN2
SE_02_052300105 chr1:234598157-234625422 27265 105 6 722 47 2 0 780 IRF2BP2,LOC101927787,LINC00184
SE_02_052300097 chr1:234699559-234728708 29149 97 9 874 62 6 82 283 LINC01132
SE_02_052300145 chr1:31664271-31676088 11817 145 2 356 35 1 83 1170 COL16A1,PEF1,HCRTR1
SE_02_052300245 chr1:33334499-33349664 15165 245 4 396 29 0 70 150 PHC2,MIR3605,A3GALT2,LOC101929464
SE_02_052300187 chr1:3911060-3955239 44179 187 9 1438 82 4 31 801 LINC01134,LINC01346,C1ORF174
SE_02_052300265 chr1:39131254-39195141 63887 265 28 1534 95 2 217 95 MACF1,NDUFS5
SE_02_052300120 chr1:42314147-42344383 30236 120 5 718 41 2 66 395 FOXJ3,RIMKLA
SE_02_052300086 chr1:44235729-44298720 62991 86 38 1522 84 7 599 182 ERI3-IT1,ERI3,DMAP1
SE_02_052300078 chr1:51949390-51987277 37887 78 7 894 77 5 98 88 RAB3B,KTI12
SE_02_052300203 chr1:54252224-54357975 105751 203 60 3210 85 19 441 252 SSBP3,SSBP3-AS1
SE_02_052300179 chr1:58858599-58912021 53422 179 17 1433 45 6 224 308 LINC01135
SE_02_052300155 chr1:74502098-74536879 34781 155 12 1031 45 11 101 0 TNNI3K,FPGT-TNNI3K,ERICH3-AS1
SE_02_052300112 chr1:74591841-74612378 20537 112 7 516 8 0 55 96 ERICH3-AS1,ERICH3
SE_02_052300150 chr1:93573974-93624616 50642 150 20 1359 111 8 153 1106 BCAR3,LOC100129046
SE_02_052300229 chr10:103541825-103599292 57467 229 21 1436 118 9 293 2421 SH3PXD2A,NEURL1,NEURL1-AS1
SE_02_052300318 chr10:103757600-103852566 94966 318 37 2493 231 8 362 161 SH3PXD2A,SH3PXD2A-AS1
SE_02_052300018 chr10:12419290-12552640 133350 18 67 4469 132 21 168 0 CAMK1D,MIR4480
SE_02_052300188 chr10:12567722-12659273 91551 188 30 2882 62 10 109 48 CAMK1D,MIR4481,MIR4480
SE_02_052300298 chr10:35397918-35474079 76161 298 27 2002 97 2 9 52 CCNY
SE_02_052300129 chr10:643811-655865 12054 129 1 462 11 1 7 515 DIP2C,PRR26,MIR5699
SE_02_052300143 chr11:111714314-111749249 34935 143 14 884 34 3 220 2050 PPP2R1B,SIK2
SE_02_052300274 chr11:112961445-113016197 54752 274 20 1441 170 3 322 231 NCAM1,LOC101928847
SE_02_052300220 chr11:113231872-113249715 17843 220 7 490 10 5 151 473 NCAM1,NCAM1-AS1
SE_02_052300286 chr11:12192196-12281920 89724 286 36 3119 183 14 324 2943 MICAL2,MIR6124,MICALCL
SE_02_052300284 chr11:12739386-12864967 125581 284 32 3534 65 8 576 244 TEAD1
SE_02_052300293 chr11:18060365-18076407 16042 293 6 424 43 0 22 0 TPH1,SAA3P,SERGEF,MRGPRX3,SAAL1
SE_02_052300258 chr11:19999664-20043283 43619 258 14 1342 21 4 145 274 NAV2,NAV2-AS2
SE_02_052300040 chr11:4671766-4718976 47210 40 14 1466 102 8 146 385 OR51E2,OR51D1,OR51E1
SE_02_052300189 chr11:4909624-4933410 23786 189 6 791 38 11 61 336 OR51G1,OR51G2,OR51A2,OR51A7,OR51T1,OR51A4
SE_02_052300121 chr11:61511501-61611905 100404 121 30 2666 135 3 1020 3433 SYT7,LOC101927495,PPP1R32,MIR4488,RPLP0P2,LRRC10B
SE_02_052300146 chr11:65470908-65510780 39872 146 17 1136 116 4 50 963 MALAT1,SCYL1,LTBP3,NEAT1,MIR612
SE_02_052300255 chr11:72759404-72792087 32683 255 11 808 73 2 145 459 MIR4692,STARD10,ARAP1,ATG16L2
SE_02_052300104 chr11:82987551-83056600 69049 104 20 1625 141 8 182 338 RAB30,SNORA70E,RAB30-AS1
SE_02_052300041 chr11:93193769-93234728 40959 41 17 989 92 0 20 149 SLC36A4
SE_02_052300115 chr12:102948672-102972051 23379 115 6 561 19 1 253 456 ASCL1,PAH
SE_02_052300047 chr12:103239313-103252251 12938 47 2 282 4 0 55 0 C12ORF42,LOC101929058
SE_02_052300181 chr12:103371045-103434797 63752 181 16 1829 123 9 286 40 C12ORF42
SE_02_052300130 chr12:106427690-106455866 28176 130 8 694 47 1 92 321 POLR3B
SE_02_052300252 chr12:106955858-106978806 22948 252 6 474 49 3 94 532 TMEM263,MTERF2
SE_02_052300174 chr12:113221569-113262790 41221 174 15 1116 74 1 60 404 TPCN1,MIR6762,RITA1,IQCD,DDX54
SE_02_052300228 chr12:120757896-120777976 20080 228 5 574 68 1 38 781 SPPL3,MIR4700,ACADS,UNC119B
SE_02_052300315 chr12:122080623-122124924 44301 315 18 1085 129 0 53 0 MLXIP,LRRC43,IL31
SE_02_052300262 chr12:124387321-124423935 36614 262 11 1272 25 1 105 538 NCOR2,MIR6880
SE_02_052300034 chr12:130537877-130651832 113955 34 40 3856 111 10 71 61 RIMBP2
SE_02_052300221 chr12:130972050-131012884 40834 221 11 1406 156 4 46 637 ADGRD1,LACAT8
SE_02_052300313 chr12:2056563-2114799 58236 313 15 1805 56 9 124 0 CACNA1C,CACNA1C-IT2
SE_02_052300089 chr12:31351111-31372269 21158 89 9 608 33 3 0 234 FAM60A,FLJ13224
SE_02_052300201 chr12:44369237-44386356 17119 201 9 453 1 0 98 37 TMEM117,NELL2
SE_02_052300324 chr12:52232901-52250391 17490 324 8 512 36 2 72 1201 KRT7,KRT80,LINC00592,C12ORF80,KRT81
SE_02_052300142 chr12:58500517-58508297 7780 142 2 228 7 1 39 0 LOC100506869,LRIG3
SE_02_052300119 chr12:6362844-6376773 13929 119 4 406 23 1 50 666 LTBR,SCNN1A,TNFRSF1A
SE_02_052300250 chr13:101911381-101926817 15436 250 3 417 4 0 55 171 FGF14,MIR2681
SE_02_052300126 chr13:111505384-111585914 80530 126 18 2890 145 9 137 0 TEX29
SE_02_052300080 chr13:111846454-111880578 34124 80 11 1108 33 3 0 0 LINC00354
SE_02_052300191 chr13:112043516-112080313 36797 191 10 956 2 0 317 765 SOX1,LINC00403
SE_02_052300101 chr13:112973155-113010898 37743 101 10 1403 106 2 28 332 MCF2L,MCF2L-AS1
SE_02_052300151 chr13:113525764-113556505 30741 151 13 1082 177 1 36 410 TMCO3,TFDP1,DCUN1D2
SE_02_052300249 chr13:23655410-23677467 22057 249 3 597 37 0 32 522 TNFRSF19
SE_02_052300211 chr13:27362183-27380002 17819 211 4 588 24 2 0 0 GTF3A
SE_02_052300082 chr14:100323891-100336094 12203 82 1 448 47 0 41 1063 WARS,SLC25A47,WDR25,MIR345,SLC25A29,MIR6764
SE_02_052300285 chr14:33051297-33071489 20192 285 8 570 2 4 184 28 NPAS3
SE_02_052300296 chr14:34436873-34454911 18038 296 5 534 33 1 4 0 SPTSSA
SE_02_052300111 chr14:68127015-68200340 73325 111 16 1777 61 21 401 0 RAD51B
SE_02_052300326 chr14:69635923-69659618 23695 326 16 642 30 0 78 87 SUSD6
SE_02_052300227 chr14:69687269-69714960 27691 227 11 765 27 1 0 1005 SUSD6,SRSF5
SE_02_052300021 chr14:69980256-70027935 47679 21 13 1401 124 9 299 449 SMOC1,SLC8A3
SE_02_052300230 chr14:77010924-77060149 49225 230 12 1416 112 13 515 1041 IRF2BPL,LOC283575,CIPC,LOC102724190
SE_02_052300059 chr14:91323716-91417726 94010 59 41 2953 193 12 254 1358 CCDC88C
SE_02_052300300 chr15:40091494-40104158 12664 300 3 386 23 0 96 110 BMF
SE_02_052300053 chr15:57196471-57281521 85050 53 32 2436 204 1 303 545 TCF12,LINC00926,LINC01413
SE_02_052300125 chr15:62068136-62125897 57761 125 22 1745 144 30 136 378 C2CD4A,VPS13C,C2CD4B
SE_02_052300073 chr15:65823880-65881388 57508 73 9 1482 105 1 161 271 RAB11A,DENND4A
SE_02_052300048 chr15:89090655-89186603 95948 48 30 2833 151 3 254 564 ABHD2,RLBP1
SE_02_052300055 chr15:91908578-91973176 64598 55 25 2072 33 2 177 160 SLCO3A1
SE_02_052300320 chr15:92002260-92044807 42547 320 21 1449 75 3 81 0 SLCO3A1
SE_02_052300164 chr15:92613983-92673757 59774 164 19 1963 156 9 153 670 FAM174B,LINC00930
SE_02_052300103 chr15:92803927-92840618 36691 103 9 1123 25 0 49 0 LINC01578,ASB9P1
SE_02_052300011 chr16:1107999-1198835 90836 11 31 4343 187 2 266 898 CACNA1H,SSTR5,C1QTNF8,TPSG1,TPSB2,TPSAB1,SSTR5-AS1
SE_02_052300093 chr16:12215398-12268032 52634 93 18 2160 57 5 47 0 SNX29
SE_02_052300216 chr16:2038465-2045222 6757 216 1 237 8 0 43 680 NTHL1,SLC9A3R2,TSC2,SYNGR3,MIR1225,ZNF598,NPW
SE_02_052300281 chr16:2466756-2501248 34492 281 7 1031 43 0 250 1907 NTN3,TBC1D24,CEMP1,CCNF,MIR3178,C16ORF59,PDPK1,ATP6V0C,MIR6768,MIR6767,AMDHD2
SE_02_052300128 chr16:35204797-35235351 30554 128 11 844 7 0 0 0 UBE2MP1,LINC01566
SE_02_052300206 chr16:35491524-35526741 35217 206 6 904 4 1 0 276 LOC100130700,FRG2DP
SE_02_052300260 chr16:52544239-52580603 36364 260 16 1104 21 16 292 401 TOX3,CASC16
SE_02_052300332 chr16:57600218-57636333 36115 332 17 1199 113 3 102 337 ADGRG1,ADGRG3
SE_02_052300124 chr16:7281453-7331048 49595 124 16 2457 0 6 284 0 RBFOX1
SE_02_052300234 chr16:81431219-81492781 61562 234 18 2339 70 12 152 237 CMIP,MIR4720,MIR7854
SE_02_052300162 chr16:81622457-81657882 35425 162 15 1272 27 3 57 248 CMIP,LOC100129617,MIR6504
SE_02_052300050 chr16:85416138-85505178 89040 50 26 3667 113 3 279 0 GSE1
SE_02_052300257 chr16:85524141-85653031 128890 257 50 5293 88 2 567 598 GSE1,GINS2
SE_02_052300012 chr16:87908474-87956828 48354 12 13 2282 62 3 44 478 CA5A,BANP,SLC7A5
SE_02_052300135 chr17:17503961-17542562 38601 135 18 1176 114 4 10 730 PEMT,MED9,RASD1
SE_02_052300114 chr17:27290445-27354355 63910 114 29 1599 86 5 175 748 MIR4522,WSB1
SE_02_052300049 chr17:2842670-2943521 100851 49 43 3425 61 7 252 91 RAP1GAP2,LOC101927911
SE_02_052300297 chr17:38870023-38888485 18462 297 6 457 43 3 103 181 LASP1,SNORA21,CWC25,RPL23,MIR6779,MIR4727,C17ORF98,LINC00672
SE_02_052300004 chr17:43231338-43301568 70230 4 29 0 0 0 0 0 RNU2-1,TMEM106A,LINC00854
SE_02_052300311 chr17:43351212-43370165 18953 311 5 729 105 4 0 64 LINC00910,ARL4D
SE_02_052300020 chr17:48147872-48244917 97045 20 25 1919 271 15 1002 475 MIR1203,SKAP1,SNX11,CBX1,THRA1/BTR
SE_02_052300279 chr17:59826639-59854012 27373 279 9 606 52 1 101 260 MIR21,VMP1,RPS6KB1,TUBD1
SE_02_052300149 chr17:63479144-63531451 52307 149 18 1680 134 9 314 4583 ACE,KCNH6,DCAF7,CYB561
SE_02_052300083 chr17:72560486-72618619 58133 83 23 1795 32 5 122 585 LINC00511,LINC00673
SE_02_052300275 chr17:79790170-79846324 56154 275 13 1450 73 6 696 1714 CBX4,CBX8,CBX2
SE_02_052300178 chr17:79986771-80047778 61007 178 25 1954 220 1 93 914 TBC1D16,CCDC40
SE_02_052300264 chr17:80591325-80630300 38975 264 18 1120 132 5 27 85 RPTOR
SE_02_052300334 chr17:81505871-81520592 14721 334 6 680 80 1 116 635 ACTG1,FSCN2,FAAP100,NPLOC4
SE_02_052300147 chr17:82187909-82218169 30260 147 5 1017 127 1 0 774 CCDC57,SLC16A3,MIR6787
SE_02_052300099 chr18:24048826-24090650 41824 99 20 1098 83 4 0 214 TTC39C,TTC39C-AS1,CABYR
SE_02_052300289 chr18:42595411-42644599 49188 289 18 1349 73 5 31 0 LINC00907,RIT2
SE_02_052300193 chr18:44769950-44853433 83483 193 21 2208 7 7 316 0 SETBP1
SE_02_052300079 chr19:13597989-13653448 55459 79 22 1659 83 1 41 0 CACNA1A,CCDC130
SE_02_052300170 chr19:38022977-38097320 74343 170 24 2044 199 3 159 638 SIPA1L3
SE_02_052300184 chr19:38647656-38703010 55354 184 22 1558 179 7 269 274 ACTN4,EIF3K,CAPN12,MAP4K1
SE_02_052300204 chr19:45090751-45132320 41569 204 13 1370 172 6 43 342 PPP1R37,GEMIN7,TRAPPC6A,NKPD1,BLOC1S3,ZNF296
SE_02_052300278 chr19:45877769-45897715 19946 278 6 562 57 1 235 1157 IRF2BP1,MYPOP,SYMPK,FOXA3,NANOS2
SE_02_052300116 chr19:49801675-49827664 25989 116 6 832 67 1 155 2455 AP2A1,MED25,FUZ,TBC1D17,MIR6800,PTOV1,MIR6799,PTOV1-AS2,AKT1S1,PTOV1-AS1,TSKS,PNKP,MIR4749
SE_02_052300068 chr19:50834625-50878516 43891 68 11 1503 172 28 41 1333 LOC105372441,KLK3,KLK2,MGC45922,SNORD88C,KLK15,ACPT,SNORD88B,C19ORF48,KLK1,KLK4,KLKP1,SNORD88A
SE_02_052300224 chr2:153472385-153491565 19180 224 10 452 8 1 79 368 RPRM
SE_02_052300118 chr2:154438984-154453727 14743 118 7 371 10 1 50 331 GALNT13,LOC100144595
SE_02_052300057 chr2:165185236-165219848 34612 57 11 809 24 1 145 115 SCN3A,SCN2A
SE_02_052300310 chr2:172992422-173009907 17485 310 9 442 31 3 103 89 RAPGEF4
SE_02_052300328 chr2:181614558-181687641 73083 328 28 1881 103 5 464 598 NEUROD1,CERKL
SE_02_052300165 chr2:209451007-209531193 80186 165 31 2179 172 3 203 23 MAP2
SE_02_052300084 chr2:216729643-216788645 59002 84 17 1618 96 6 132 0 IGFBP5
SE_02_052300153 chr2:223020869-223061213 40344 153 7 1042 52 3 168 544 KCNE4
SE_02_052300236 chr2:223537336-223564989 27653 236 7 736 20 2 108 0 SCG2
SE_02_052300085 chr2:225446549-225496881 50332 85 17 1278 30 1 112 0 NYAP2
SE_02_052300325 chr2:231602952-231615262 12310 325 4 323 38 0 87 0 C2ORF57,LINC00471
SE_02_052300222 chr2:234670462-234693809 23347 222 6 724 44 7 56 0 LINC01173
SE_02_052300051 chr2:234952171-235012315 60144 51 19 1989 15 2 112 385 SH3BP4
SE_02_052300060 chr2:238234413-238295400 60987 60 14 1900 171 4 280 2909 PER2,HES6,ILKAP,LOC643387,LOC151174,TRAF3IP1
SE_02_052300131 chr2:28620711-28644755 24044 131 10 848 130 4 66 1030 PLB1,PPP1CB
SE_02_052300268 chr2:37344105-37358068 13963 268 6 410 48 4 53 208 QPCT,PRKD3
SE_02_052300156 chr2:37613670-37679993 66323 156 22 2073 172 6 329 933 CDC42EP3
SE_02_052300072 chr2:53510839-53528127 17288 72 3 557 15 2 0 0 CHAC2
SE_02_052300316 chr2:54545414-54643667 98253 316 25 3061 357 10 315 1398 SPTBN1,RPL23AP32
SE_02_052300330 chr2:62563504-62572674 9170 330 2 225 23 0 5 0 TMEM17
SE_02_052300209 chr2:66520191-66586154 65963 209 23 1549 54 17 965 484 LOC100507073,MEIS1
SE_02_052300294 chr2:67033867-67056831 22964 294 4 632 19 8 114 0 LOC102800447
SE_02_052300292 chr2:67444878-67476876 31998 292 5 900 79 5 128 0 ETAA1
SE_02_052300225 chr2:70084339-70090821 6482 225 3 204 14 0 131 686 PCBP1-AS1,PCBP1,LOC100133985
SE_02_052300248 chr2:8301588-8380868 79280 248 23 2433 34 28 276 266 LINC00299
SE_02_052300016 chr2:8474986-8598413 123427 16 42 3846 115 4 355 0 LOC101929567
SE_02_052300100 chr2:8653548-8686684 33136 100 12 1106 53 2 278 321 ID2,ID2-AS1
SE_02_052300081 chr20:10239139-10272104 32965 81 13 878 37 1 64 0 SNAP25,SNAP25-AS1
SE_02_052300210 chr20:11676785-11726620 49835 210 9 1308 59 1 176 0 LINC00687
SE_02_052300107 chr20:11898463-11952303 53840 107 9 1359 70 4 298 562 BTBD3,LINC00687
SE_02_052300023 chr20:16923344-16930065 6721 23 2 199 4 1 0 0 OTOR
SE_02_052300038 chr20:17165668-17183133 17465 38 6 547 47 0 31 0 PCSK2
SE_02_052300030 chr20:20203591-20255485 51894 30 12 1357 52 1 291 222 CFAP61,INSM1
SE_02_052300001 chr20:20352608-20502978 150370 1 29 3825 85 10 1055 1606 RALGAPA2,INSM1,CFAP61
SE_02_052300002 chr20:20517131-20570359 53228 2 12 1249 43 4 279 636 RALGAPA2
SE_02_052300007 chr20:20589497-20637451 47954 7 9 1159 53 3 148 428 RALGAPA2
SE_02_052300110 chr20:21519362-21538018 18656 110 8 471 19 0 181 0 NKX2-2,LOC101929625
SE_02_052300005 chr20:22452691-22538095 85404 5 23 2520 24 9 344 0 LOC284788,LINC00261,FOXA2
SE_02_052300136 chr20:22556400-22602031 45631 136 13 1410 51 8 462 1525 FOXA2,LINC00261,LINC01384
SE_02_052300141 chr20:31661424-31724023 62599 141 31 1377 95 9 346 894 ABALON,BCL2L1,TPX2,COX4I2
SE_02_052300009 chr20:33457478-33595998 138520 9 41 3395 127 4 281 332 CBFA2T2,SNTA1
SE_02_052300218 chr20:36461755-36492839 31084 218 11 748 23 0 112 389 DLGAP4,MYL9
SE_02_052300319 chr20:51524645-51542696 18051 319 6 499 11 6 52 165 NFATC2
SE_02_052300065 chr21:38756214-38835586 79372 65 23 2222 193 9 211 1207 ETS2,LINC00114,LOC101928398
SE_02_052300033 chr21:38941471-38988656 47185 33 11 1504 50 11 91 0 LOC101928435,LOC400867
SE_02_052300321 chr21:39660493-39697047 36554 321 10 1046 54 10 35 357 B3GALT5,IGSF5,B3GALT5-AS1
SE_02_052300139 chr21:42513228-42573003 59775 139 15 2007 271 3 114 1456 SLC37A1,RSPH1,LOC101928233
SE_02_052300054 chr22:20498952-20564445 65493 54 24 1900 163 3 79 787 MED15,KLHL22
SE_02_052300024 chr22:20935776-20960474 24698 24 6 699 84 2 57 619 LOC101928891,CRKL,THAP7,AIFM3,THAP7-AS1,LZTR1
SE_02_052300312 chr22:22156937-22222119 65182 312 12 2321 317 9 0 767 VPREB1
SE_02_052300240 chr22:22357036-22410356 53320 240 16 2363 220 3 0 1397 BMS1P20
SE_02_052300066 chr22:23173718-23281836 108118 66 53 3633 336 9 247 1784 BCR,FBXW4P1,RAB36,RSPH14
SE_02_052300302 chr22:23518501-23538398 19897 302 6 867 105 2 0 0 PCAT14,LOC388882,IGLL1
SE_02_052300076 chr22:25896063-25976347 80284 76 29 2364 75 9 177 986 MYO18B,SEZ6L
SE_02_052300199 chr22:26642330-26665487 23157 199 11 641 84 7 0 236 MIAT,MIATNB,CRYBA4,CRYBB1
SE_02_052300283 chr22:28782029-28825612 43583 283 8 1081 121 3 121 902 XBP1,CCDC117,CHEK2,HSCB
SE_02_052300167 chr22:36425239-36470324 45085 167 13 1436 174 3 52 250 TXN2,FOXRED2,MYH9
SE_02_052300205 chr3:105384532-105432585 48053 205 14 1154 78 2 87 0 ALCAM
SE_02_052300180 chr3:120677432-120695724 18292 180 6 473 26 0 79 472 RABL3,HGD,GTF2E1
SE_02_052300022 chr3:138358321-138420292 61971 22 21 1615 145 18 139 900 MRAS,ESYT3,NME9
SE_02_052300323 chr3:142614732-142628693 13961 323 5 355 36 9 31 35 PLS1,ATR
SE_02_052300144 chr3:156511497-156541178 29681 144 14 754 112 9 114 549 SSR3,KCNAB1
SE_02_052300113 chr3:167708805-167762635 53830 113 25 1300 53 1 134 417 PDCD10,SERPINI1
SE_02_052300231 chr3:178082949-178090693 7744 231 1 207 5 0 29 0 KCCAT211
SE_02_052300070 chr3:178417124-178446584 29460 70 14 847 14 2 21 102 LINC01014
SE_02_052300015 chr3:179920705-180055907 135202 15 42 3509 307 11 386 278 PEX5L,PEX5L-AS2
SE_02_052300306 chr3:182363744-182394446 30702 306 5 690 14 1 185 0 FLJ46066
SE_02_052300290 chr3:182477815-182493753 15938 290 4 400 3 0 168 41 FLJ46066
SE_02_052300322 chr3:183245102-183309134 64032 322 20 1637 33 3 49 1560 MCF2L2,B3GNT5
SE_02_052300154 chr3:183372978-183382464 9486 154 3 252 16 3 5 70 MCF2L2
SE_02_052300308 chr3:183805187-183817360 12173 308 7 368 53 4 34 1106 MAP6D1,YEATS2
SE_02_052300096 chr3:189292714-189325206 32492 96 7 886 16 4 153 320 TPRG1,TPRG1-AS2,TP63
SE_02_052300254 chr3:193737493-193746298 8805 254 2 285 2 0 0 0 OPA1-AS1
SE_02_052300088 chr3:194095449-194143068 47619 88 12 1465 26 1 387 492 HES1
SE_02_052300299 chr4:101187559-101257961 70402 299 29 1749 139 2 168 72 MIR8066,PPP3CA
SE_02_052300242 chr4:113048996-113094438 45442 242 18 1126 68 4 112 65 ANK2,MIR1243
SE_02_052300171 chr4:114865525-114926486 60961 171 15 1643 29 3 188 47 NDST4
SE_02_052300259 chr4:138887015-138919736 32721 259 9 907 31 5 138 0 NOCT
SE_02_052300062 chr4:139782857-139888453 105596 62 30 2727 140 10 495 76 MAML3,MGST2
SE_02_052300163 chr4:139984843-140055812 70969 163 25 1828 72 6 275 0 MAML3
SE_02_052300064 chr4:152346525-152398185 51660 64 12 1161 46 4 221 238 FBXW7,DEAR
SE_02_052300261 chr4:152447700-152498847 51147 261 20 1234 79 8 33 88 FBXW7,MIR3140,DKFZP434I0714,MIR4453
SE_02_052300014 chr4:165375696-165476972 101276 14 35 2696 376 17 50 439 CPE,MIR578,MSMO1
SE_02_052300039 chr4:23860049-23910005 49956 39 11 1401 44 8 582 394 PPARGC1A
SE_02_052300207 chr4:37976711-38016907 40196 207 16 1059 95 6 80 300 TBC1D1,PTTG2
SE_02_052300266 chr4:73589298-73625412 36114 266 14 960 51 1 90 246 RASSF6
SE_02_052300140 chr4:76179644-76213885 34241 140 10 959 108 6 69 290 SCARB2,FAM47E-STBD1,NUP54,FAM47E
SE_02_052300061 chr4:8008719-8063746 55027 61 18 2116 44 5 80 928 ABLIM2,MIR95
SE_02_052300256 chr4:8104489-8129240 24751 256 6 971 15 3 31 228 ABLIM2
SE_02_052300029 chr4:89241311-89308865 67554 29 21 1965 115 18 194 966 GPRIN3
SE_02_052300208 chr5:102781115-102815435 34320 208 10 870 83 2 0 0 PAM
SE_02_052300160 chr5:124628562-124675490 46928 160 17 1246 27 2 512 787 ZNF608
SE_02_052300271 chr5:124698331-124751125 52794 271 16 1302 9 10 544 413 ZNF608
SE_02_052300148 chr5:137264921-137321272 56351 148 31 1527 95 1 189 42 SPOCK1
SE_02_052300212 chr5:138945976-138973014 27038 212 12 694 31 1 115 440 SIL1,LRRTM2
SE_02_052300232 chr5:16518260-16554207 35947 232 15 1059 83 4 77 0 FAM134B
SE_02_052300169 chr5:172127789-172168841 41052 169 10 1230 110 4 36 87 STK10,EFCAB9
SE_02_052300267 chr5:30094259-30103309 9050 267 4 262 0 0 2 0 LOC101929681
SE_02_052300108 chr5:30187649-30202492 14843 108 6 458 0 1 30 0 LOC101929681,CDH6
SE_02_052300246 chr5:30599819-30609599 9780 246 1 254 0 0 25 0 CDH6
SE_02_052300045 chr5:33994569-34013882 19313 45 7 504 68 1 26 405 C1QTNF3-AMACR,AMACR,C1QTNF3,SLC45A2
SE_02_052300098 chr5:370202-431617 61415 98 18 2106 310 6 53 631 AHRR,EXOC3-AS1,PP7080,EXOC3,LOC100288152
SE_02_052300069 chr5:4614337-4647954 33617 69 6 877 5 4 163 0 LOC101929153,ICE1
SE_02_052300327 chr5:6448822-6528209 79387 327 26 2504 161 8 145 828 UBE2QL1
SE_02_052300094 chr5:6541317-6552532 11215 94 5 430 48 3 0 0 LINC01018
SE_02_052300132 chr6:116921930-116975077 53147 132 21 1369 208 2 179 376 RFX6
SE_02_052300287 chr6:136598212-136621896 23684 287 9 549 15 1 0 239 MAP3K5,LOC101928461,MAP7
SE_02_052300200 chr6:138204625-138259717 55092 200 22 1494 73 7 99 718 ARFGEF3,PBOV1
SE_02_052300166 chr6:154427813-154512847 85034 166 38 2372 71 9 207 536 CNKSR3
SE_02_052300109 chr6:154566702-154595617 28915 109 7 830 32 1 54 0 CNKSR3
SE_02_052300194 chr6:157220832-157247045 26213 194 13 609 36 1 86 0 TMEM242
SE_02_052300190 chr6:20657822-20726962 69140 190 19 1843 52 58 175 0 CDKAL1
SE_02_052300291 chr6:56497377-56568552 71175 291 23 1678 88 2 221 1187 DST
SE_02_052300295 chr6:7543326-7568898 25572 295 9 772 59 8 107 489 DSP,SNRNP48
SE_02_052300272 chr7:102572812-102615526 42714 272 9 136 12 0 116 3418 RASA4B,RASA4,POLR2J3,SPDYE2B,UPK3BL
SE_02_052300314 chr7:105010630-105037786 27156 314 10 701 27 0 115 699 KMT2E,KMT2E-AS1,LINC01004
SE_02_052300282 chr7:112191431-112206389 14958 282 4 342 10 0 89 95 DOCK4,ZNF277
SE_02_052300276 chr7:114647998-114663583 15585 276 4 348 10 7 578 281 FOXP2,MIR3666
SE_02_052300092 chr7:130352558-130375047 22489 92 8 626 65 3 113 869 CPA5,CPA1
SE_02_052300277 chr7:150354666-150387378 32712 277 10 876 118 3 159 1320 REPIN1,ZNF775,LINC00996,LRRC61,LOC728743,ZBED6CL,RARRES2,ACTR3C
SE_02_052300122 chr7:20214969-20227999 13030 122 5 347 8 1 50 57 MACC1
SE_02_052300237 chr7:21358980-21369846 10866 237 5 347 15 2 36 0 SP4
SE_02_052300161 chr7:28102788-28116597 13809 161 5 390 33 0 8 0 JAZF1,JAZF1-AS1
SE_02_052300133 chr7:29270013-29299384 29371 133 8 852 45 8 75 42 CHN2,LOC102724484
SE_02_052300087 chr7:30135471-30174347 38876 87 12 1138 104 3 82 686 MTURN
SE_02_052300025 chr7:36904073-36972371 68298 25 17 1861 13 9 247 47 ELMO1,MIR1200,ELMO1-AS1
SE_02_052300273 chr7:41690222-41711780 21558 273 7 493 2 3 279 428 INHBA-AS1,INHBA
SE_02_052300013 chr7:47136903-47198820 61917 13 15 1855 35 0 0 0 TNS3
SE_02_052300027 chr7:47436160-47540080 103920 27 43 3113 128 9 143 401 TNS3
SE_02_052300006 chr7:50452864-50566163 113299 6 30 3595 406 73 207 1789 DDC,DDC-AS1,FIGNL1
SE_02_052300019 chr7:51208968-51319894 110926 19 42 3126 104 4 166 280 COBL
SE_02_052300152 chr7:51334353-51352123 17770 152 5 490 17 0 20 0 COBL
SE_02_052300233 chr7:5421526-5430778 9252 233 2 266 2 0 204 359 TNRC18
SE_02_052300195 chr7:82198747-82290929 92182 195 29 2398 75 6 235 36 CACNA2D1
SE_02_052300198 chr7:82407801-82453125 45324 198 12 1134 55 5 199 201 CACNA2D1
SE_02_052300172 chr7:82539567-82573510 33943 172 12 914 6 1 110 0 CACNA2D1
SE_02_052300043 chr7:93193799-93228868 35069 43 9 697 41 3 176 360 HEPACAM2,SAMD9L,VPS50
SE_02_052300253 chr7:99077973-99110481 32508 253 5 749 55 0 27 0 SMURF1
SE_02_052300331 chr8:101757212-101794467 37255 331 11 985 30 1 134 72 NCALD
SE_02_052300071 chr8:11426400-11475344 48944 71 20 2216 306 13 104 869 FAM167A-AS1,FAM167A,BLK
SE_02_052300028 chr8:125272320-125319018 46698 28 12 1284 36 7 168 0 NSMCE2,TRIB1
SE_02_052300223 chr8:125416590-125435958 19368 223 5 510 2 2 223 587 TRIB1
SE_02_052300175 chr8:126387583-126430497 42914 175 13 1371 50 2 66 0 LOC101927657
SE_02_052300010 chr8:127297362-127312080 14718 10 3 489 2 4 86 0 CASC21,CASC8
SE_02_052300008 chr8:128526774-128560798 34024 8 4 1043 0 11 128 176 LINC00824
SE_02_052300303 chr8:138802561-138851156 48595 303 12 1501 0 1 71 675 COL22A1
SE_02_052300117 chr8:139736897-139807260 70363 117 21 2297 110 4 73 0 TRAPPC9,KCNK9
SE_02_052300238 chr8:17526050-17545197 19147 238 8 726 34 4 50 189 SLC7A2,PDGFRL
SE_02_052300158 chr8:52246901-52256707 9806 158 3 236 2 0 191 0 ST18
SE_02_052300288 chr8:52329622-52345534 15912 288 3 462 1 0 69 0 ST18
SE_02_052300042 chr8:58990895-59064132 73237 42 45 1851 35 8 534 0 TOX
SE_02_052300137 chr8:59082317-59119250 36933 137 10 900 18 0 366 95 TOX
SE_02_052300280 chr8:60460225-60469398 9173 280 7 242 26 0 22 0 RAB2A,LINC01301
SE_02_052300031 chr8:60739553-60852940 113387 31 44 2913 138 11 722 1774 CHD7
SE_02_052300003 chr8:72722139-72895539 173400 3 54 4402 154 17 464 0 KCNB2,LOC101926908
SE_02_052300182 chr8:73305824-73317664 11840 182 2 288 24 1 62 260 RDH10,RDH10-AS1,C8ORF89,RPL7
SE_02_052300037 chr8:74280183-74305906 25723 37 5 707 36 3 61 0 JPH1,GDAP1
SE_02_052300063 chr8:80067606-80172881 105275 63 43 2741 339 7 69 329 TPD52,MRPS28
SE_02_052300251 chr8:82837002-82845600 8598 251 6 255 0 0 24 0 LINC01419,SNX16
SE_02_052300123 chr8_KI270810v1_alt:0-6064 6064 123 3 0 0 0 0 0 LINC00824
SE_02_052300243 chr9:102580599-102592410 11811 243 3 370 0 1 6 0 LINC00587
SE_02_052300244 chr9:120377791-120416738 38947 244 12 1050 83 3 161 981 CDK5RAP2,MIR147A
SE_02_052300052 chr9:126397211-126452755 55544 52 13 1461 134 2 408 605 MVB12B,NRON
SE_02_052300235 chr9:127953241-127992012 38771 235 8 1057 110 1 0 393 FAM102A,ST6GALNAC4,PIP5KL1,ST6GALNAC6,DPM2
SE_02_052300309 chr9:130714257-130750292 36035 309 11 1079 31 1 9 44 ABL1,PRDM12,EXOSC2
SE_02_052300127 chr9:131605256-131680047 74791 127 20 2044 171 20 138 1031 RAPGEF1
SE_02_052300035 chr9:133842663-133957825 115162 35 37 4389 284 10 141 137 VAV2
SE_02_052300202 chr9:136900084-136926970 26886 202 10 1031 82 5 30 1056 TRAF2,EDF1,FBXW5,LCN12,MIR4479,C8G,MAMDC4
SE_02_052300333 chr9:18756270-18780994 24724 333 11 778 11 7 109 458 ADAMTSL1,MIR3152
SE_02_052300269 chr9:2285018-2302927 17909 269 8 666 3 11 43 0 SMARCA2
SE_02_052300168 chr9:33674635-33722088 47453 168 18 1096 206 2 0 368 PTENP1,PTENP1-AS,PRSS3,LINC01251
SE_02_052300241 chr9:41034564-41072980 38416 241 12 606 49 0 233 603 PGM5P2,FRG1HP,LOC440896
SE_02_052300329 chr9:68366209-68390527 24318 329 10 626 67 0 64 163 PGM5,PGM5-AS1
SE_02_052300247 chr9:95022997-95078428 55431 247 23 1382 53 3 172 54 C9ORF3,MIR6081,MIR27B,MIR24-1,MIR3074,MIR23B
SE_02_052300305 chr9:98205991-98231806 25815 305 11 773 114 3 68 634 TBC1D2,MIR6854,CORO2A
SE_02_052300214 chr9:99163072-99203695 40623 214 11 1050 58 2 134 0 ALG2,SEC61B
SE_02_052300017 chrX:115843461-115893600 50139 17 17 231 11 0 0 0 DANT2
SE_02_052300197 chrX:2455853-2500976 45123 197 19 1751 102 0 0 1090 ZBED1,DHRSX

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM2857607
Input ID: Name:GSM2857608
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb