Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000024422
Gene: EHD2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:47713422-47743134 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104900142 chr19:47562132-47707505 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 142 93 4405 289 8 330 2873 GLTSCR1,ZNF541,NAPA,EHD2,SNORD23,GLTSCR2
SE_02_093000139 chr19:47578321-47668915 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 139 54 2808 200 7 81 123 GLTSCR1,ZNF541,EHD2,GLTSCR2
SE_02_092900042 chr19:47578788-47669094 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 42 45 2805 199 7 81 123 GLTSCR1,ZNF541,EHD2,GLTSCR2
SE_02_088600462 chr19:47582062-47668725 Sample_02_0886 Skin foreskin_ p63KLF4 462 24 2678 192 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_076300558 chr19:47582775-47668191 Sample_02_0763 Podocyte podocyte_DEX 558 13 2650 190 7 81 123 GLTSCR1,ZNF541,EHD2
SE_01_008800302 chr19:47588834-47668327 Sample_01_0088 Tibial nerve tibial-nerve 302 10 2483 180 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_111100192 chr19:47596138-47681766 Sample_02_1111 Other HGrC1_SMAD2/3KO 192 33 2641 193 7 180 1179 GLTSCR1,ZNF541,EHD2
SE_02_116800163 chr19:47596487-47681131 Sample_02_1168 Biliary H69_TGF Vehicle_2 163 28 2610 190 7 172 1063 GLTSCR1,ZNF541,EHD2
SE_02_080800449 chr19:47596572-47666409 Sample_02_0808 Ovary RMG1_ARID1A KO 449 31 2152 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_151000093 chr19:47597480-47668850 Sample_02_1510 Lung H3122_LR_Pano 93 25 2221 162 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_085300205 chr19:47597507-47669014 Sample_02_0853 Mammary gland MCF7L-TamR 205 16 2222 162 7 81 123 GLTSCR1,ZNF541,EHD2
SE_01_008900236 chr19:47597793-47666933 Sample_01_0089 Transverse colon transverse-colon 236 10 2124 160 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_016600071 chr19:47597795-47668562 Sample_02_0166 Mammary gland HCC1954_Parental 71 8 2191 162 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_016700551 chr19:47597795-47668562 Sample_02_0167 Mammary gland HCC1954_LCC2 551 8 2191 162 7 81 123 GLTSCR1,EHD2,ZNF541
SE_01_007800214 chr19:47597824-47667717 Sample_01_0078 Heart left ventricle heart-left-ventricle 214 7 2168 161 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_032200046 chr19:47597863-47669341 Sample_02_0322 Colon Caco-2 46 7 2215 161 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_000200365 chr19:47597957-47668497 Sample_02_0002 Mammary gland MCF-7_10Gygamma_2.5h 365 8 2189 161 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_154100137 chr19:47597961-47668667 Sample_02_1541 Nasopharyngeal HNE1 137 23 2193 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_00_003100096 chr19:47597982-47669196 Sample_00_0031 Placenta placenta 96 10 2211 161 7 81 123 GLTSCR1,EHD2,ZNF541,GLTSCR2
SE_02_035500071 chr19:47597994-47668487 Sample_02_0355 Colon HCT15 71 12 2189 161 7 81 123 GLTSCR1,EHD2,ZNF541
SE_01_003700122 chr19:47598021-47668510 Sample_01_0037 Liver hepatocyte 122 12 2189 161 7 81 123 GLTSCR1,EHD2,ZNF541
SE_01_004600073 chr19:47598047-47668607 Sample_01_0046 Mammary gland MCF-7 73 10 2192 161 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_070300217 chr19:47598097-47668096 Sample_02_0703 Pancreas PATU8988S WT 217 14 2172 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_01_010900124 chr19:47598102-47666909 Sample_01_0109 Colon transverse colon_54y 124 24 2117 159 7 81 123 GLTSCR1,ZNF541,EHD2,NAPA,KPTN
SE_02_153900143 chr19:47598116-47669050 Sample_02_1539 Nasopharyngeal C666-1 143 22 2204 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_077000408 chr19:47598160-47668170 Sample_02_0770 Ovary OVCA429_shLuc 408 33 2174 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_137100094 chr19:47598161-47668169 Sample_02_1371 Pancreas Patu899S-untreated 94 16 2174 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_143400059 chr19:47598166-47668726 Sample_02_1434 Trophoblast trophoblast stem cells 59 13 2191 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_033000170 chr19:47598168-47668060 Sample_02_0330 Endoderm MHG 170 16 2169 161 7 81 123 GLTSCR1,EHD2,ZNF541
SE_01_007200477 chr19:47598178-47668397 Sample_01_0072 Breast epithelium breast-epithelium 477 10 2181 161 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_053000150 chr19:47598185-47668900 Sample_02_0530 Mammary gland MCF10A 150 24 2199 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_098900746 chr19:47598193-47665443 Sample_02_0989 Kidney kidney cortex_WT 746 24 2074 158 7 81 123 GLTSCR1,ZNF541,EHD2
SE_01_007600401 chr19:47598247-47698787 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 401 13 3107 218 7 260 2091 GLTSCR1,EHD2,ZNF541,GLTSCR2
SE_02_047600012 chr19:47598256-47668996 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 12 34 2202 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_143300607 chr19:47598262-47667740 Sample_02_1433 Bone A673 STAG2 null 607 25 2163 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_01_008200245 chr19:47598341-47668388 Sample_01_0082 Right lobe of liver right-lobe-of-liver 245 15 2179 161 7 81 123 GLTSCR1,EHD2,ZNF541
SE_01_007900293 chr19:47598351-47666134 Sample_01_0079 Peyers patch Peyers-patch 293 11 2099 158 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_143200474 chr19:47598357-47703477 Sample_02_1432 Bone A673 STAG2 WT 474 40 3233 219 8 304 2873 GLTSCR1,ZNF541,EHD2,GLTSCR2
SE_02_088900497 chr19:47598465-47668101 Sample_02_0889 Heart left ventricle_LV1183 497 17 2165 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_01_009400323 chr19:47598485-47698273 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 323 30 3081 217 7 251 2004 GLTSCR1,ZNF541,EHD2,GLTSCR2
SE_02_023700708 chr19:47598488-47668500 Sample_02_0237 Colon V389 708 18 2177 161 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_081600312 chr19:47598496-47668076 Sample_02_0816 Ovary Clear cell ovarian cancer 312 18 2162 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_052500019 chr19:47598525-47668050 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 19 34 2161 161 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_074700558 chr19:47598572-47681906 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 558 19 2575 189 7 180 1208 GLTSCR1,ZNF541,EHD2
SE_02_052400033 chr19:47598595-47670865 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 33 39 2242 165 7 85 220 GLTSCR1,ZNF541,EHD2
SE_02_036800390 chr19:47598620-47668430 Sample_02_0368 Skeletal muscle NS134 390 12 2170 160 7 81 123 GLTSCR1,EHD2,ZNF541
SE_01_009700192 chr19:47598622-47698277 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 192 28 3077 216 7 251 2004 GLTSCR1,ZNF541,EHD2,GLTSCR2
SE_01_009800430 chr19:47598665-47668153 Sample_01_0098 Heart left ventricle_51y 430 15 2162 160 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_074600403 chr19:47598715-47668197 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 403 20 2160 160 7 81 123 GLTSCR1,ZNF541,EHD2
SE_00_005100268 chr19:47598723-47667374 Sample_00_0051 Adrenal gland adrenal gland 30y 268 26 2141 159 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_155300563 chr19:47598768-47667736 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 563 17 2150 160 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_121300450 chr19:47599045-47665228 Sample_02_1213 Brain GBM31 450 17 2046 157 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_120500495 chr19:47599130-47668008 Sample_02_1205 Brain NB3 495 23 2141 160 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_003200493 chr19:47599677-47668058 Sample_02_0032 Pancreas pancreatic-islets-M 493 13 2127 160 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_036700449 chr19:47599679-47675201 Sample_02_0367 Skeletal muscle NS129 449 12 2343 177 7 95 363 GLTSCR1,EHD2,ZNF541
SE_00_001400105 chr19:47599916-47666555 Sample_00_0014 Heart left ventricle heart-left-ventricle 105 7 2066 157 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_001900338 chr19:47599949-47668116 Sample_02_0019 Embryo Neural crest cells 338 15 2129 160 7 81 123 GLTSCR1,EHD2,ZNF541
SE_02_097700358 chr19:47599962-47665779 Sample_02_0977 Brain 2089_H3.3K27WT 358 16 2047 157 7 81 123 GLTSCR1,ZNF541,EHD2
SE_02_120300403 chr19:47600037-47668036 Sample_02_1203 Brain NB1 403 17 2121 160 7 81 123 GLTSCR1,ZNF541,EHD2,KPTN,GLTSCR2
SE_00_004900171 chr19:47600083-47664956 Sample_00_0049 Small intestine small intestine 30y 171 18 2015 157 7 80 123 GLTSCR1,ZNF541,EHD2
SE_02_032500147 chr19:47600403-47668401 Sample_02_0325 Liver hepatocytes_d1 147 13 2128 160 7 76 123 GLTSCR1,EHD2,ZNF541
SE_02_032700252 chr19:47600518-47668322 Sample_02_0327 Liver hepatocytes_d6 252 11 2122 160 7 69 123 GLTSCR1,EHD2,ZNF541
SE_02_075700090 chr19:47600571-47668660 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 90 15 2130 160 7 67 123 GLTSCR1,ZNF541,EHD2
SE_02_113200646 chr19:47623211-47668429 Sample_02_1132 Pancreas KLM1 wt 646 19 1469 119 6 8 0 GLTSCR1,EHD2
SE_02_071800510 chr19:47623329-47668047 Sample_02_0718 Pancreas PATU8988S_GFP_DOX 510 13 1454 119 6 8 0 GLTSCR1,EHD2
SE_02_136200844 chr19:47623460-47668530 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 844 12 1467 119 6 8 0 GLTSCR1,EHD2
SE_02_136000918 chr19:47623544-47668689 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 918 11 1469 119 6 8 0 GLTSCR1,EHD2
SE_02_136101181 chr19:47623571-47668438 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 1181 12 1460 119 6 8 0 GLTSCR1,EHD2
SE_02_072200335 chr19:47623779-47668713 Sample_02_0722 Pancreas PATU8988S_TP63dN_DOX 335 15 1465 119 6 8 0 GLTSCR1,EHD2
SE_02_071300887 chr19:47623914-47669204 Sample_02_0713 Pancreas BxPC3_sgTP63 887 12 1477 119 6 8 0 GLTSCR1,EHD2
SE_02_040100431 chr19:47630661-47668322 Sample_02_0401 Mammary gland SUM159PT-T47D 431 6 1222 102 6 3 0 GLTSCR1,EHD2
SE_02_035300289 chr19:47633112-47675168 Sample_02_0353 Colon HT29 289 6 1343 117 5 14 240 GLTSCR1,EHD2
SE_02_125800245 chr19:47633195-47669449 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 245 5 1166 101 5 0 0 GLTSCR1,EHD2
SE_02_150900344 chr19:47633231-47667987 Sample_02_1509 Lung H3122_LR 344 13 1122 100 5 0 0 GLTSCR1,EHD2
SE_02_123000329 chr19:47633306-47668241 Sample_02_1230 Lung PC9 329 9 1123 99 5 0 0 GLTSCR1,EHD2
SE_02_144000061 chr19:47637339-47668820 Sample_02_1440 Cytotrophoblast Cytotrophoblast 61 8 1014 83 4 0 0 GLTSCR1,EHD2
SE_02_004500437 chr19:47637885-47664954 Sample_02_0045 Embryo endodermal CyT49_ES_D7 437 8 863 78 4 0 0 GLTSCR1,EHD2
SE_02_129700370 chr19:47637937-47668430 Sample_02_1297 Lung lung 370 7 982 81 4 0 0 GLTSCR1,EHD2
SE_02_116700676 chr19:47638000-47668852 Sample_02_1167 Biliary H69_TGF Vehicle_1 676 9 999 81 4 0 0 GLTSCR1,EHD2
SE_02_075400164 chr19:47638071-47668201 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 164 12 972 81 4 0 0 GLTSCR1,EHD2
SE_02_082700462 chr19:47638404-47664936 Sample_02_0827 Stomach normal gastric 462 5 848 78 4 0 0 GLTSCR1,EHD2
SE_02_076700645 chr19:47641000-47669067 Sample_02_0767 Ovary OVCA429 645 22 919 75 4 0 0 GLTSCR1,EHD2
SE_02_049300334 chr19:47641276-47667980 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 334 11 879 75 4 0 0 GLTSCR1,EHD2
SE_02_075201167 chr19:47642021-47664971 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 1167 6 753 71 4 0 0 GLTSCR1,EHD2
SE_02_075500662 chr19:47642176-47698193 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 662 13 1773 130 4 170 1881 GLTSCR1,EHD2,GLTSCR2
SE_02_072600298 chr19:47642357-47668299 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 298 9 858 74 4 0 0 GLTSCR1,EHD2
SE_02_129900512 chr19:47643263-47668022 Sample_02_1299 Liver liver 512 9 826 74 4 0 0 GLTSCR1,EHD2
SE_02_129600399 chr19:47643474-47667985 Sample_02_1296 Perigastric lymph node Perigastric lymph node 399 8 820 73 3 0 0 GLTSCR1,EHD2
SE_02_080900573 chr19:47644036-47667658 Sample_02_0809 Mammary gland T47D Serum 573 5 788 71 3 0 0 GLTSCR1,EHD2
SE_01_008000533 chr19:47644192-47666792 Sample_01_0080 Prostate prostate 533 3 736 67 3 0 0 GLTSCR1,EHD2
SE_02_081900721 chr19:47644543-47668224 Sample_02_0819 Ovary Mucinous ovarian cancer 721 6 787 69 3 0 0 GLTSCR1,EHD2
SE_02_066900788 chr19:47645022-47668003 Sample_02_0669 Prostate prostate cancer_DSG 788 9 774 69 3 0 0 GLTSCR1,EHD2
SE_02_020200128 chr19:47645067-47668499 Sample_02_0202 Stomach YCC7 128 7 789 69 3 0 0 GLTSCR1,EHD2
SE_02_020800095 chr19:47645205-47668456 Sample_02_0208 Stomach YCC3 95 7 784 68 3 0 0 GLTSCR1,EHD2
SE_01_005900191 chr19:47646491-47665968 Sample_01_0059 Lung PC-9 191 2 652 57 3 0 0 GLTSCR1,EHD2
SE_02_151300956 chr19:47646884-47667418 Sample_02_1513 Lung Transitional AT2->1 cells 956 5 703 57 3 0 0 GLTSCR1,EHD2
SE_02_016300187 chr19:47646954-47665260 Sample_02_0163 Prostate C4-2B_SR2211_24h 187 6 617 55 3 0 0 GLTSCR1,EHD2
SE_02_002100947 chr19:47647137-47665113 Sample_02_0021 Colon V429 947 3 606 55 3 0 0 GLTSCR1,EHD2
SE_02_123300349 chr19:47647349-47667976 Sample_02_1233 Lung PC9_miR-4497 mimic 349 7 701 57 3 0 0 GLTSCR1,EHD2
SE_02_123100379 chr19:47647400-47668009 Sample_02_1231 Lung PC9_siMED13L-1 379 8 698 57 3 0 0 GLTSCR1,EHD2
SE_02_020700561 chr19:47647462-47665972 Sample_02_0207 Stomach FU97 561 5 622 52 3 0 0 GLTSCR1,EHD2
SE_02_123200268 chr19:47647509-47668197 Sample_02_1232 Lung PC9_siMED13L-2 268 8 699 55 3 0 0 GLTSCR1,EHD2
SE_02_151200696 chr19:47647553-47665602 Sample_02_1512 Lung Purified AT2 cells 696 2 604 52 3 0 0 GLTSCR1,EHD2
SE_02_020500365 chr19:47647766-47664942 Sample_02_0205 Stomach Gastric_Primary_Sample_T 365 8 580 52 3 0 0 GLTSCR1,EHD2
SE_02_126401480 chr19:47648092-47665644 Sample_02_1264 Bone Im-GCT-4072_G34W KO 1480 3 587 52 3 0 0 GLTSCR1,EHD2
SE_02_135900878 chr19:47648151-47668816 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 878 8 699 53 3 0 0 GLTSCR1,EHD2
SE_02_117400735 chr19:47657683-47666792 Sample_02_1174 Brain GBM02 735 6 291 26 3 0 0 GLTSCR1,EHD2
SE_01_011501233 chr19:47658012-47665415 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 1233 3 238 24 2 0 0 GLTSCR1,EHD2
SE_02_137400943 chr19:47660571-47668102 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 943 7 259 15 0 0 0 GLTSCR1,EHD2
SE_02_072500224 chr19:47660786-47668877 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 224 9 277 15 0 0 0 GLTSCR1,EHD2
SE_02_004300534 chr19:47662134-47684284 Sample_02_0043 Embryo endodermal CyT49_ES_D2 534 5 701 40 0 109 1210 GLTSCR1,EHD2
SE_02_060400277 chr19:47662414-47668625 Sample_02_0604 Mammary gland MCF10A_scrshRNA_DMSO 277 1 209 7 0 0 0 GLTSCR1,EHD2
SE_02_060000227 chr19:47662454-47668788 Sample_02_0600 Mammary gland MCF10A_p53shRNA_DMSO 227 1 216 7 0 0 0 GLTSCR1,EHD2
SE_02_060100230 chr19:47662552-47668593 Sample_02_0601 Mammary gland MCF10A_p53shRNA_Nutlin3A 230 1 204 7 0 0 0 GLTSCR1,EHD2
SE_01_002900566 chr19:47662560-47665337 Sample_01_0029 Lung fibroblast-of-lung 566 1 89 4 0 0 0 GLTSCR1,EHD2
SE_02_104701476 chr19:47664534-47707407 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1476 21 1311 66 1 223 2750 GLTSCR1,SNORD23,EHD2,GLTSCR2
SE_02_036000243 chr19:47743162-47755269 Sample_02_0360 Haematopoietic and lymphoid tissue SEM 243 2 485 60 0 56 945 GLTSCR2,EHD2,SNORD23,TPRX1,SEPW1
SE_02_057300209 chr19:47743190-47755544 Sample_02_0573 Blood Nalm6_1 209 2 504 65 0 58 1004 GLTSCR2,SEPW1,TPRX1,GLTSCR2-AS1,EHD2,SNORD23
SE_02_006000464 chr19:47743190-47755722 Sample_02_0060 Haematopoietic and lymphoid tissue blood WT-11bp/Jurkat 464 2 511 66 0 58 1065 GLTSCR2,EHD2,SNORD23,TPRX1,SEPW1
SE_02_121600204 chr19:47744891-47755427 Sample_02_1216 Blood Jurkat ZBTB1 KO 204 1 438 57 0 48 937 GLTSCR2,SEPW1,TPRX1,GLTSCR2-AS1,EHD2,SNORD23
SE_02_121500346 chr19:47744949-47755424 Sample_02_1215 Blood Jurkat ZBTB1 KO_Asparagine deprivation 346 2 434 56 0 48 936 GLTSCR2,SEPW1,TPRX1,GLTSCR2-AS1,EHD2,SNORD23
SE_02_121700280 chr19:47745081-47755211 Sample_02_1217 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1_Asparagine deprivation 280 1 418 54 0 46 879 GLTSCR2,SEPW1,TPRX1,GLTSCR2-AS1,EHD2,SNORD23
SE_02_121400198 chr19:47745120-47755210 Sample_02_1214 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1 198 2 416 54 0 46 878 GLTSCR2,SEPW1,TPRX1,GLTSCR2-AS1,EHD2,SNORD23
SE_02_022500420 chr19:47747930-47756651 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 420 1 353 54 0 35 1026 SNORD23,GLTSCR2,EHD2,TPRX1,SEPW1

Genomic distribution of SEs associated with EHD2

The strength of the tissue affected by the gene


Expression of EHD2