SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900042
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr19:47578788-47669094
Size: 90306
Super-enhancer rank 42
Number of SE elements: 45
ChIP density(Case|Control): 65011.2894|8533.917
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GLTSCR1 ;
ROSE Overlap GLTSCR1 ;
ROSE Proximal ZNF541 ; EHD2 ;
ROSE Closest GLTSCR1 ;
Lasso ZNF541 ; EHD2 ; GLTSCR1 ; GLTSCR2 ;
PreSTIGE ;
ABC ;
BETA ZNF541 ; GLTSCR1 ; EHD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900042 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers