SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: prestige Ensembl ID: ENSG00000204351
Gene: SKIV2L Gene type: protein_coding
Strand: + External links:
Genomic region: chr6:31959117-31969751 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_003900298 chr6:31968733-31974176 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 298 1 141 16 4 77 950 SKIV2L,DOM3Z,STK19,RDBP,C2,CYP21A2,CFB,C4A,TNXB,TNXA,MIR1236,C6orf48,CLIC1,CSNK2B,DDAH2,DDX39B,EHT2,GPANK1,HSPA1A,HSPA1B,HSPA1L,SH5,SH5-SAPCD1,NEU1,PPT2,PRRC2A,PRRT1,VARS,VWA7,ZBTB12,DO3Z,SLC44A4
SE_01_003900660 chr6:32010777-32015415 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 660 1 64 5 0 47 948 STK19,TNXA,C4B,TNXB,C4A,DOM3Z,CYP21A2,C2,DXO,EHT2,NELFE,SKIV2L,ZBTB12,DO3Z
SE_01_003900187 chr6:32030136-32048860 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 187 4 361 46 5 170 3114 CYP21A2,TNXB,C4A,C4B,TNXA,STK19,ATF6B,C2,DXO,EHT2,FKBPL,NELFE,SKIV2L,ZBTB12,DO3Z
Genomic distribution of SEs associated with SKIV2L
Genome Browser

The strength of the tissue affected by the gene

Expression of SKIV2L

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)