SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900298
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:31968733-31974176
Size: 5443
Super-enhancer rank 298
Number of SE elements: 1
ChIP density(Case|Control): 34514.063|1385.7878
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: STK19 ;
ROSE Overlap SKIV2L ; DOM3Z ; STK19 ;
ROSE Proximal RDBP ; C2 ; CYP21A2 ; CFB ; C4A ; TNXB ; TNXA ; MIR1236 ;
ROSE Closest STK19 ;
Lasso C2 ; C6orf48 ; CLIC1 ; CSNK2B ; DDAH2 ; DDX39B ; EHT2 ; GPANK1 ; HSPA1A ; HSPA1B ; HSPA1L ; SH5 ; SH5-SAPCD1 ; NEU1 ; PPT2 ; PRRC2A ; PRRT1 ; VARS ; VWA7 ; ZBTB12 ;
PreSTIGE DO3Z ; SKIV2L ; SLC44A4 ; ZBTB12 ;
ABC ;
BETA C2 ; STK19 ; CYP21A2 ; NELFE ; C4B ; CFB ; C4A ; MIR1236 ; SLC44A4 ; EHMT2 ; C2-AS1 ; TNXA ; SKIV2L ; C4B_2 ; TNXB ; ZBTB12 ; DXO ; CYP21A1P ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900298 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers