SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900660
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr6:32010777-32015415
Size: 4638
Super-enhancer rank 660
Number of SE elements: 1
ChIP density(Case|Control): 22467.3996|1115.439
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNXA ;
ROSE Overlap STK19 ; TNXA ; C4B ; TNXB ; C4A ;
ROSE Proximal DOM3Z ; CYP21A2 ; STK19 ;
ROSE Closest TNXA ;
Lasso C2 ; C4A ; CYP21A2 ; DXO ; EHT2 ; NELFE ; SKIV2L ; STK19 ; ZBTB12 ;
PreSTIGE DO3Z ; SKIV2L ;
ABC ;
BETA C2 ; STK19 ; CYP21A2 ; NELFE ; C4B ; CFB ; C4A ; MIR1236 ; TNXB ; C2-AS1 ; TNXA ; SKIV2L ; C4B_2 ; DXO ; CYP21A1P ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900660 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers