SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000188976
Gene: NOC2L Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:944203-959309 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_077500173 chr1:893457-947078 Sample_02_0775 Pancreas EndoC-BH1_SE 173 21 2227 191 1 0 3579 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17,C1orf170,RNF223
SE_02_108200715 chr1:895000-944820 Sample_02_1082 Retina retina 715 17 2083 181 0 0 3106 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_147900022 chr1:898718-957318 Sample_02_1479 Bone EW-7 22 10 2608 223 1 0 4799 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,HES4,KLHL17
SE_02_055500029 chr1:902268-944625 Sample_02_0555 Other HAP1_WT 29 11 1811 153 0 0 3049 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_106000241 chr1:903483-944430 Sample_02_1060 Bone TC71_SA2 KO 241 12 1759 149 0 0 3017 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_031300091 chr1:903592-946392 Sample_02_0313 Neuroblastoma SK-N-DZ 91 7 1861 151 1 0 3444 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_106100085 chr1:903648-945884 Sample_02_1061 Bone TC71_WT 85 17 1831 150 1 0 3341 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_148800085 chr1:903648-945884 Sample_02_1488 Bone TC-71 85 17 1831 150 1 0 3341 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_148000491 chr1:903692-945585 Sample_02_1480 Bone MHH-ES-1 491 13 1821 149 1 0 3285 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_051700753 chr1:903696-945372 Sample_02_0517 Esophagus TE5 753 9 1806 149 1 0 3232 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_025100362 chr1:903696-945815 Sample_02_0251 Autonomic ganglia SH-SY5Y-MYCN-OFF 362 6 1829 150 1 0 3333 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_148500031 chr1:903698-945910 Sample_02_1485 Bone SK-ES-1 31 11 1833 150 1 0 3341 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_150300293 chr1:903699-945878 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 293 12 1831 150 1 0 3341 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_050600749 chr1:903701-945372 Sample_02_0506 Esophagus TE5_1 749 9 1806 149 1 0 3232 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_040400092 chr1:903724-944365 Sample_02_0404 Mammary gland ZR-75-1_2 92 9 1750 145 0 0 2995 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_030000086 chr1:903753-946808 Sample_02_0300 Neuroblastoma CLB-PE 86 4 1873 150 1 0 3531 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_150100182 chr1:903773-946202 Sample_02_1501 Brain SHEP-21N_NOSPIKE 182 12 1843 149 1 0 3389 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_045300380 chr1:903803-948291 Sample_02_0453 Neuroblastoma SJNB3 380 11 1948 155 1 0 3695 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_110600058 chr1:903808-948802 Sample_02_1106 Brain NGP 58 18 1969 156 1 0 3829 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_110500190 chr1:903858-946751 Sample_02_1105 Brain NBL-S 190 18 1870 150 1 0 3520 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_063300227 chr1:903866-945326 Sample_02_0633 Gastrointestinal Stromal GIST-48B_Imatinib 227 10 1801 147 1 0 3221 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_149700235 chr1:903891-944937 Sample_02_1497 Brain SHEP-21N 235 13 1783 146 1 0 3115 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_106800019 chr1:903918-945917 Sample_02_1068 Brain NGP_ctrl 19 15 1829 149 1 0 3341 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_150200331 chr1:903919-945791 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 331 13 1825 149 1 0 3330 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_147400515 chr1:903923-945613 Sample_02_1474 Bone CHLA-10 515 12 1818 148 1 0 3286 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_153900148 chr1:903945-945331 Sample_02_1539 Nasopharyngeal C666-1 148 15 1801 147 1 0 3222 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_063400453 chr1:903991-945429 Sample_02_0634 Gastrointestinal Stromal GIST-48B_JQ1 453 11 1804 148 1 0 3245 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_030600548 chr1:904000-945990 Sample_02_0306 Autonomic ganglia SH-SY5Y 548 7 1830 149 1 0 3341 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_054200250 chr1:904070-945978 Sample_02_0542 Brain Kelly_ResJQ1 250 7 1828 149 1 0 3341 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_149800266 chr1:904072-945266 Sample_02_1498 Brain SHEP-21N_DOX_2h 266 12 1793 147 1 0 3201 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_030300208 chr1:904148-946110 Sample_02_0303 Neuroblastoma LAN1 208 8 1828 146 1 0 3371 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_140500030 chr1:904154-945597 Sample_02_1405 Embryonic kidney HEK293_siBAHD1_W667G_mutant 30 10 1808 144 1 0 3285 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_143200830 chr1:904182-944742 Sample_02_1432 Bone A673 STAG2 WT 830 14 1757 141 0 0 3078 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_007500023 chr1:904191-946273 Sample_02_0075 Autonomic ganglia kelly_DMSO_3h 23 6 1837 146 1 0 3402 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_128000211 chr1:904195-946288 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 211 14 1838 146 1 0 3408 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_054300176 chr1:904250-945989 Sample_02_0543 Brain Kelly_vehicle 176 9 1817 145 1 0 3341 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_111400009 chr1:904335-946394 Sample_02_1114 Embryonic kidney HEK293 9 11 1841 146 1 0 3444 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_148300193 chr1:904341-945535 Sample_02_1483 Bone RD-ES 193 12 1794 144 1 0 3276 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_030400247 chr1:904350-946386 Sample_02_0304 Neuroblastoma N206 247 6 1840 146 1 0 3440 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_105900700 chr1:904359-946044 Sample_02_1059 Bone A673_WT 700 12 1820 145 1 0 3351 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_147300702 chr1:904359-946044 Sample_02_1473 Bone A-673 702 12 1820 145 1 0 3351 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_150000059 chr1:904377-946293 Sample_02_1500 Brain KELLY_untreat 59 17 1834 146 1 0 3412 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_148200812 chr1:904388-945655 Sample_02_1482 Bone POE 812 6 1802 144 1 0 3294 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_110000223 chr1:904393-948339 Sample_02_1100 Brain COG-N-415 223 22 1933 152 1 0 3707 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_148600028 chr1:904397-945864 Sample_02_1486 Bone SK-N-MC 28 18 1809 145 1 0 3341 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_105801197 chr1:904411-945297 Sample_02_1058 Bone A673_SA2 Rescue 1197 12 1780 143 1 0 3214 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_01_011200002 chr1:904419-945667 Sample_01_0112 Embryonic kidney HEK293_encode 2 13 1799 144 1 0 3296 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_067200767 chr1:904434-945983 Sample_02_0672 Endometrium endometrium cancer_DSG 767 13 1811 145 1 0 3341 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_066300444 chr1:904448-946583 Sample_02_0663 Thyroid TT 444 15 1840 146 1 0 3481 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_030900046 chr1:904450-946113 Sample_02_0309 Neuroblastoma SJNB6 46 7 1816 145 1 0 3371 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_062800019 chr1:904464-948274 Sample_02_0628 Brain CHP-134 19 17 1923 151 1 0 3688 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_111100717 chr1:904506-947959 Sample_02_1111 Other HGrC1_SMAD2/3KO 717 20 1900 151 1 0 3611 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_027600118 chr1:904700-945490 Sample_02_0276 Retina FW15 118 7 1778 144 1 0 3260 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_123800028 chr1:904791-946445 Sample_02_1238 Skin MS1_virus_positive 28 15 1828 146 1 0 3455 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17,ISG15,AGRN
SE_02_033800081 chr1:904825-944606 Sample_02_0338 Neuroblastoma BE2 81 5 1727 141 0 0 3043 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_055300366 chr1:904888-945363 Sample_02_0553 Other HSSY2 shCt 366 12 1771 143 1 0 3232 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_123500081 chr1:904977-946455 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 81 17 1826 145 1 0 3457 SAMD11,LOC100130417,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17
SE_02_005000157 chr1:908207-948431 Sample_02_0050 Skin BJ 157 20 1826 144 1 0 3729 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_029900462 chr1:915932-945796 Sample_02_0299 Neuroblastoma CLB-MA 462 8 1428 111 1 0 2566 SAMD11,NOC2L,FLJ39609,PLEKHN1,FAM41C,C1ORF170,KLHL17
SE_02_078000201 chr1:921335-948735 Sample_02_0780 Liver SMMC-7721 201 12 1314 92 1 0 2647 SAMD11,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17,LOC100130417
SE_02_067400819 chr1:923436-944756 Sample_02_0674 Endometrium E1_FA 819 5 1024 73 0 0 1912 SAMD11,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17,LOC100130417
SE_02_075300424 chr1:923490-945330 Sample_02_0753 Embryo ES-derived progenitors_FG type 424 3 1053 75 1 0 2052 SAMD11,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17,LOC100130417
SE_02_141900152 chr1:923575-945367 Sample_02_1419 Brain hNSC 152 4 1051 75 1 0 2062 SAMD11,NOC2L,PLEKHN1,FAM41C,PERM1,KLHL17,LOC100130417
SE_02_116300055 chr1:930555-944400 Sample_02_1163 Embryonic kidney HEK293 no dox 55 10 663 42 0 0 1372 SAMD11,NOC2L,PLEKHN1,PERM1,KLHL17,LOC100130417
SE_02_074300156 chr1:931222-946118 Sample_02_0743 Embryo ES derived mesoderm_day2 156 12 722 46 1 0 1661 SAMD11,NOC2L,PLEKHN1,PERM1,KLHL17,LOC100130417
SE_02_025200051 chr1:934544-948521 Sample_02_0252 Neuroblastoma IMR5-75-shMYCN-MYCN_high 51 1 709 38 1 0 2043 SAMD11,NOC2L,FLJ39609,PLEKHN1,C1ORF170,KLHL17
SE_02_027700220 chr1:934732-946997 Sample_02_0277 Retina FW18 220 1 628 33 1 0 1846 SAMD11,NOC2L,FLJ39609,PLEKHN1,C1ORF170,KLHL17
SE_02_027500427 chr1:934759-946453 Sample_02_0275 Retina FW14 427 1 606 32 1 0 1733 SAMD11,NOC2L,FLJ39609,PLEKHN1,C1ORF170,KLHL17
SE_02_027800281 chr1:934771-946574 Sample_02_0278 Retina FW24 281 1 609 32 1 0 1756 SAMD11,NOC2L,FLJ39609,PLEKHN1,C1ORF170,KLHL17
SE_02_025300117 chr1:934771-946969 Sample_02_0253 Brain BE2C_DMSO 117 1 627 33 1 0 1844 SAMD11,NOC2L,FLJ39609,PLEKHN1,C1ORF170,KLHL17
SE_02_025400035 chr1:934804-946793 Sample_02_0254 Neuroblastoma IMR5-75 35 1 619 32 1 0 1806 SAMD11,NOC2L,FLJ39609,PLEKHN1,C1ORF170,KLHL17
SE_02_031500113 chr1:934845-946962 Sample_02_0315 Neuroblastoma TR14 113 1 627 33 1 0 1842 SAMD11,NOC2L,FLJ39609,PLEKHN1,C1ORF170,KLHL17
SE_02_043600052 chr1:934858-946500 Sample_02_0436 Kidney HEK293A_empty-vector_DMSO_6h 52 1 606 32 1 0 1738 SAMD11,NOC2L,FLJ39609,PLEKHN1,C1ORF170,KLHL17
SE_02_043500169 chr1:934865-946328 Sample_02_0435 Kidney HEK293A_WT-MEF2B_DMSO_6h 169 1 601 32 1 0 1700 SAMD11,NOC2L,FLJ39609,PLEKHN1,C1ORF170,KLHL17
SE_02_147700270 chr1:935078-945285 Sample_02_1477 Bone EW-22 270 6 535 29 1 0 1487 SAMD11,NOC2L,PLEKHN1,PERM1,KLHL17,LOC100130417
SE_02_140400124 chr1:935224-945830 Sample_02_1404 Embryonic kidney HEK293_siBAHD1_WT 124 5 557 31 1 0 1614 SAMD11,NOC2L,PLEKHN1,PERM1,KLHL17,LOC100130417
SE_02_021601330 chr1:936459-950800 Sample_02_0216 Skin NHEK_scramble 1330 4 722 42 1 0 1992 SAMD11,NOC2L,HES4,FLJ39609,PLEKHN1,C1ORF170,KLHL17
SE_02_085200435 chr1:937531-947552 Sample_02_0852 Mammary gland MCF7L-P 435 1 501 25 1 0 1657 SAMD11,NOC2L,PLEKHN1,PERM1,KLHL17,LOC100130417
SE_02_115900437 chr1:937531-947552 Sample_02_1159 Mammary gland MCF7 437 1 501 25 1 0 1657 SAMD11,NOC2L,PLEKHN1,PERM1,KLHL17,LOC100130417
SE_02_044000631 chr1:937932-945832 Sample_02_0440 Bone LM7 631 4 406 21 1 0 1389 SAMD11,NOC2L,PLEKHN1,PERM1,KLHL17,LOC100130417
SE_02_122300157 chr1:938374-946379 Sample_02_1223 Bone marrow KMS28BM 157 3 415 20 1 0 1491 SAMD11,NOC2L,PLEKHN1,PERM1,KLHL17,LOC100130417
SE_02_155900648 chr1:939558-945739 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 648 2 318 17 1 0 1178 SAMD11,NOC2L,PLEKHN1,PERM1,KLHL17,LOC100130417
SE_02_031500325 chr1:956680-963979 Sample_02_0315 Neuroblastoma TR14 325 1 357 24 0 67 1413 KLHL17,NOC2L,SAMD11,HES4,FLJ39609,PLEKHN1,ISG15,C1ORF170
SE_02_103000319 chr1:957329-964629 Sample_02_1030 Colon DKO 319 1 364 22 0 84 1468 KLHL17,NOC2L,PLEKHN1,SAMD11,PERM1,LOC100130417,ISG15,HES4
SE_02_103501017 chr1:958092-961624 Sample_02_1035 Mammary gland HCC70_Vehicle 1017 1 140 10 0 17 601 KLHL17,NOC2L,PLEKHN1,SAMD11,PERM1,LOC100130417,HES4
Genomic distribution of SEs associated with NOC2L
Genome Browser

The strength of the tissue affected by the gene

Expression of NOC2L

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)