SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_148800085
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: TC-71
Genomic region: chr1:903648-945884
Size: 42236
Super-enhancer rank 85
Number of SE elements: 17
ChIP density(Case|Control): 42556.9936|5059.8728
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SAMD11 ;
ROSE Overlap SAMD11 ; LOC100130417 ; NOC2L ;
ROSE Proximal PLEKHN1 ; FAM41C ; PERM1 ; KLHL17 ; LOC100130417 ;
ROSE Closest SAMD11 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC01128 ; HES4 ; PLEKHN1 ; KLHL17 ; LOC100130417 ; SAMD11 ; PERM1 ; AGRN ; FAM41C ; LINC00115 ; ISG15 ; NOC2L ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_148800085 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers