SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000284583
Gene: MIR935 Gene type: miRNA
Strand: + External links:
Genomic region: chr19:53982307-53982397 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_097100626 chr19:53945251-53983093 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 626 5 1118 42 1 162 818 CACNG8,MIR935,CACNG7,CACNG6
SE_02_026000332 chr19:53976909-53994436 Sample_02_0260 Lung NCI-H1299_EGFP-NEO_reporter_cells_SB939 332 6 524 35 0 83 2224 MIR935,CACNG6,CACNG8
SE_02_011000433 chr19:53977089-54036996 Sample_02_0110 Ovaries IOE11 433 5 1826 130 1 118 2597 MIR935,CACNG6,CACNG8,TARM1,VSTM1
SE_02_025900371 chr19:53977146-53993219 Sample_02_0259 Lung NCI-H1299_EGFP-NEO_reporter_cells_SAHA 371 2 456 30 0 77 2181 MIR935,CACNG6,CACNG8
SE_01_000600161 chr19:53977188-54025179 Sample_01_0006 Lung A549_ethanol_1h 161 9 1471 121 1 114 2597 MIR935,CACNG6,CACNG8,VSTM1
SE_03_001300596 chr19:53977209-54024542 Sample_03_0013 Lung A549 596 5 1456 120 1 114 2597 MIR935,CACNG6,CACNG8,VSTM1
SE_03_000800519 chr19:53977278-54024768 Sample_03_0008 Lung A549_dexamethasone_7h 519 4 1462 120 1 114 2597 MIR935,CACNG6,CACNG8,VSTM1
SE_01_001200464 chr19:53977310-54031766 Sample_01_0012 Lung A549_dexamethasone_1h 464 8 1638 125 1 114 2597 MIR935,CACNG6,CACNG8,TARM1,VSTM1
SE_03_001000566 chr19:53977314-54024469 Sample_03_0010 Lung A549_dexamethasone_1h 566 6 1453 120 1 114 2597 MIR935,CACNG6,CACNG8,VSTM1
SE_02_027400081 chr19:53977549-54036447 Sample_02_0274 Endometriosis hTERT_KD 81 9 1794 127 1 118 2597 MIR935,CACNG6,CACNG8,TARM1,VSTM1
SE_03_000500468 chr19:53977558-54024677 Sample_03_0005 Lung A549_dexamethasone_0.5h 468 7 1452 119 1 114 2597 MIR935,CACNG6,CACNG8,VSTM1
SE_02_025800181 chr19:53977563-53994859 Sample_02_0258 Lung NCI-H1299_EGFP-NEO_reporter_cells_DMSO 181 2 521 34 0 83 2224 MIR935,CACNG6,CACNG8
SE_02_001700773 chr19:53977566-53982616 Sample_02_0017 Embryo H9_ESC 773 2 155 4 0 38 419 MIR935,CACNG8,CACNG6
SE_02_040100196 chr19:53977618-54036888 Sample_02_0401 Mammary gland SUM159PT-T47D 196 10 1806 127 1 118 2597 MIR935,CACNG6,CACNG8,TARM1,VSTM1
SE_02_010800608 chr19:53977668-54021057 Sample_02_0108 Fallopian tube FT246 608 6 1331 105 1 114 2597 MIR935,CACNG6,CACNG8,VSTM1
SE_02_005300053 chr19:53977675-54044111 Sample_02_0053 Colon DKO1 53 15 2079 144 2 119 2833 CACNG8,MIR935,CACNG6,VSTM1,TARM1
SE_02_126900904 chr19:53977678-54020849 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 904 6 1319 104 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_04_000900063 chr19:53977689-54024526 Sample_04_0009 Lung A549 63 9 1442 119 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_006900273 chr19:53977698-54043563 Sample_02_0069 Brain SF268 273 14 2066 141 2 119 2833 CACNG8,MIR935,CACNG6,VSTM1,TARM1
SE_04_001000115 chr19:53977703-54024564 Sample_04_0010 Lung A549 TGFb 115 7 1442 118 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_125600014 chr19:53977712-54025704 Sample_02_1256 Pancreatic duct pancreatic ductal epithelium cell 14 2 1470 119 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_116900176 chr19:53977716-54024469 Sample_02_1169 Biliary H69_TGF beta_16h_2 176 13 1439 118 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_116600159 chr19:53977717-54023966 Sample_02_1166 Biliary H69_TGF beta_16h_1 159 10 1426 118 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_116800191 chr19:53977725-54023949 Sample_02_1168 Biliary H69_TGF Vehicle_2 191 15 1424 118 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_116700193 chr19:53977747-54023942 Sample_02_1167 Biliary H69_TGF Vehicle_1 193 12 1424 118 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_04_000500044 chr19:53977757-54023995 Sample_04_0005 Lung A549 FOXA2 overexpressed 44 9 1427 118 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_04_000600554 chr19:53977762-53983113 Sample_04_0006 Lung A549 GFP control 554 2 151 4 0 38 590 CACNG8,MIR935,CACNG6
SE_02_050500343 chr19:53977772-54024797 Sample_02_0505 Esophagus KYSE70_1 343 12 1447 118 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_077000374 chr19:53977809-54023946 Sample_02_0770 Ovary OVCA429_shLuc 374 16 1420 118 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_125700049 chr19:53977809-54025494 Sample_02_1257 Pancreas pancreatic cancer cells 49 10 1460 119 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_146900413 chr19:53977867-53994389 Sample_02_1469 Umbilical Vein HUVEC 413 3 492 33 0 83 2224 CACNG6,CACNG8,MIR935
SE_02_088300958 chr19:53977934-54023985 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 958 9 1420 117 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_095000535 chr19:53977955-54024448 Sample_02_0950 Umbilical vein HUVEC_WT 535 17 1432 117 1 114 2597 CACNG6,CACNG8,MIR935,VSTM1
SE_02_115100301 chr19:53978055-54024959 Sample_02_1151 Mammary gland MCF-7_UNTR 301 28 1442 117 1 114 2573 CACNG6,CACNG8,MIR935,VSTM1
SE_02_138200512 chr19:53978108-53993639 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 512 6 450 28 0 77 2188 CACNG6,CACNG8,MIR935
SE_02_103000099 chr19:53978134-54034832 Sample_02_1030 Colon DKO 99 25 1725 124 1 114 2548 CACNG6,CACNG8,MIR935,VSTM1,TARM1
SE_02_125800205 chr19:53978489-54024763 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 205 13 1426 116 1 105 2491 CACNG6,CACNG8,MIR935,VSTM1
SE_02_043300282 chr19:53978600-53995685 Sample_02_0433 Lung NCI-H1299_EGFP-NEO_reporter_cells_DAC 282 1 515 31 0 77 2118 MIR935,CACNG6,CACNG8
SE_02_008000043 chr19:53978778-54024069 Sample_02_0080 Lung Calu-3 43 15 1405 116 1 100 2491 MIR935,CACNG6,CACNG8,VSTM1
SE_02_088101185 chr19:53978921-54023965 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 1185 7 1396 116 1 100 2491 CACNG6,CACNG8,MIR935,VSTM1
SE_02_039800168 chr19:53979103-54036423 Sample_02_0398 Mammary gland MDA-MB-231-MCF-7 168 6 1750 124 1 104 2491 MIR935,CACNG6,CACNG8,TARM1,VSTM1
SE_02_077100295 chr19:53979135-54024498 Sample_02_0771 Ovary OVCA429_shGRHL2 295 18 1404 116 1 100 2491 CACNG6,CACNG8,MIR935,VSTM1
SE_02_102400081 chr19:53979218-54025533 Sample_02_1024 Prostate PC3 cells 81 14 1429 117 1 100 2491 CACNG6,CACNG8,MIR935,VSTM1
SE_02_105600043 chr19:53979232-54023934 Sample_02_1056 Esophagus ChTRT 43 8 1389 116 1 100 2491 CACNG6,CACNG8,MIR935,VSTM1
SE_02_105700044 chr19:53979314-54024052 Sample_02_1057 Esophagus GihTRT 44 8 1393 116 1 100 2491 CACNG6,CACNG8,MIR935,VSTM1
SE_02_076700381 chr19:53979335-54023920 Sample_02_0767 Ovary OVCA429 381 14 1387 116 1 100 2491 CACNG6,CACNG8,MIR935,VSTM1
SE_02_042300515 chr19:53979361-54037406 Sample_02_0423 Skin A375 515 9 1809 127 1 104 2491 MIR935,CACNG6,CACNG8,TARM1,VSTM1
Genomic distribution of SEs associated with MIR935
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR935

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)