SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: LOC649133 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_069200014 chr11:120233626-120309528 Sample_02_0692 Lung NCI-H526_no infection 14 23 2088 111 12 286 1801 POU2F3,LOC649133,TMEM136,ARHGEF12,OAF
SE_02_069700017 chr11:120233685-120304347 Sample_02_0697 Lung NCI-H1048-cas9_sgHROSA 17 20 1934 104 11 263 1474 POU2F3,LOC649133,TMEM136,ARHGEF12,OAF
SE_02_128400006 chr11:120234406-120271232 Sample_02_1284 Lung NCI-H211_p8-15 6 6 1028 38 3 180 1157 POU2F3,LOC649133,OAF
SE_02_068500015 chr11:120235158-120262289 Sample_02_0685 Lung NCI-H1048_no infection 15 7 768 27 3 168 962 POU2F3,LOC649133,OAF
SE_02_128900010 chr11:120235273-120261549 Sample_02_1289 Lung NCI-H526_p8-15 10 5 751 27 3 167 905 POU2F3,LOC649133,OAF
SE_02_068800051 chr11:120236427-120261548 Sample_02_0688 Lung NCI-H211_no infection 51 12 719 27 2 152 905 POU2F3,LOC649133,OAF
SE_02_069800200 chr11:120238939-120261077 Sample_02_0698 Lung NCI-H1048-cas9_sgPOU2F3 200 9 613 25 1 148 770 POU2F3,LOC649133,OAF
SE_02_069600020 chr11:120238957-120260171 Sample_02_0696 Lung COR-L311 20 10 583 24 1 144 770 POU2F3,LOC649133,OAF
SE_02_128100141 chr11:120242907-120260574 Sample_02_1281 Lung NCI-H1048_p8-15 141 13 495 19 1 86 598 POU2F3,LOC649133,OAF
SE_02_103501150 chr11:120249237-120317559 Sample_02_1035 Mammary gland HCC70_Vehicle 1150 28 1870 104 9 190 1705 POU2F3,LOC649133,TMEM136,ARHGEF12,OAF
Genomic distribution of SEs associated with LOC649133
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC649133

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)