Gene overview
| Strategies/Algorithm: | overlap | Ensembl ID: | ENSG00000248599 |
| Gene: | FLJ42969 | Gene type: | lncRNA |
| Strand: | + | External links: |
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| Genomic region: | chr8:101034868-101076407 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_102600002 | chr8:100993142-101173411 |
Sample_02_1026 | Esophagus | KYSE200 | 2 | 76 | 5053 | 217 | 18 | 322 | 530 | FLJ42969,ZNF706,YWHAZ |
| SE_02_103200034 | chr8:101002330-101101227 |
Sample_02_1032 | Head and neck | SCC1 JQ1 | 34 | 44 | 2800 | 121 | 2 | 186 | 435 | FLJ42969,YWHAZ |
| SE_02_077000095 | chr8:101002975-101109274 |
Sample_02_0770 | Ovary | OVCA429_shLuc | 95 | 43 | 3000 | 120 | 6 | 194 | 435 | FLJ42969,YWHAZ |
| SE_02_017700548 | chr8:101021306-101054277 |
Sample_02_0177 | Urinary bladder | J82 | 548 | 4 | 956 | 76 | 1 | 51 | 182 | FLJ42969 |
| SE_02_050600035 | chr8:101022121-101184945 |
Sample_02_0506 | Esophagus | TE5_1 | 35 | 53 | 4497 | 169 | 15 | 275 | 530 | FLJ42969,ZNF706 |
| SE_02_102900683 | chr8:101024120-101064168 |
Sample_02_1029 | Colon | HCT116 | 683 | 7 | 1167 | 73 | 1 | 86 | 239 | FLJ42969 |
| SE_02_116600685 | chr8:101024217-101054232 |
Sample_02_1166 | Biliary | H69_TGF beta_16h_1 | 685 | 5 | 875 | 68 | 1 | 51 | 182 | FLJ42969 |
| SE_02_116900701 | chr8:101024237-101054240 |
Sample_02_1169 | Biliary | H69_TGF beta_16h_2 | 701 | 6 | 874 | 68 | 1 | 51 | 182 | FLJ42969 |
| SE_02_076200154 | chr8:101024304-101207599 |
Sample_02_0762 | Podocyte | podocyte_CTL | 154 | 43 | 4997 | 178 | 17 | 335 | 1180 | FLJ42969,ZNF706 |
| SE_02_078000706 | chr8:101024457-101064163 |
Sample_02_0780 | Liver | SMMC-7721 | 706 | 9 | 1147 | 71 | 1 | 86 | 239 | FLJ42969 |
| SE_02_076600461 | chr8:101024940-101054076 |
Sample_02_0766 | Ovary | PEO1 | 461 | 7 | 843 | 66 | 1 | 51 | 182 | FLJ42969 |
| SE_02_059400977 | chr8:101025089-101082097 |
Sample_02_0594 | iPSC-derived | neural progenitors | 977 | 10 | 1575 | 74 | 2 | 122 | 435 | FLJ42969 |
| SE_02_050500050 | chr8:101025419-101184314 |
Sample_02_0505 | Esophagus | KYSE70_1 | 50 | 36 | 4372 | 162 | 15 | 270 | 530 | FLJ42969,ZNF706 |
| SE_02_051600050 | chr8:101025419-101184314 |
Sample_02_0516 | Esophagus | KYSE70 | 50 | 35 | 4372 | 162 | 15 | 270 | 530 | FLJ42969,ZNF706 |
| SE_02_092100927 | chr8:101025939-101063892 |
Sample_02_0921 | Heart | embryonic heart_CS22 | 927 | 8 | 1083 | 69 | 1 | 85 | 239 | FLJ42969 |
| SE_02_101700175 | chr8:101041109-101207221 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 175 | 29 | 4536 | 146 | 16 | 304 | 1180 | FLJ42969,ZNF706 |
| SE_00_002301058 | chr8:101041181-101062713 |
Sample_00_0023 | Embryo | mesenchymal-stem-cell | 1058 | 4 | 648 | 39 | 0 | 41 | 239 | FLJ42969 |
| SE_02_136000492 | chr8:101041504-101099220 |
Sample_02_1360 | Bladder | UMUC1_sonic_pSIN-puro_EV | 492 | 21 | 1617 | 40 | 1 | 110 | 435 | FLJ42969 |
| SE_02_049200124 | chr8:101042161-101100314 |
Sample_02_0492 | Pharyng | Detroit 562_LPS | 124 | 16 | 1621 | 38 | 1 | 110 | 435 | FLJ42969 |
| SE_02_049100095 | chr8:101042161-101109093 |
Sample_02_0491 | Pharyng | Detroit 562-Control | 95 | 17 | 1862 | 38 | 5 | 118 | 435 | FLJ42969 |
| SE_02_051700049 | chr8:101042413-101184944 |
Sample_02_0517 | Esophagus | TE5 | 49 | 48 | 3937 | 127 | 14 | 244 | 530 | FLJ42969,ZNF706 |
| SE_00_001101077 | chr8:101043616-101091950 |
Sample_00_0011 | Esophagus | esophagus | 1077 | 8 | 1337 | 33 | 1 | 103 | 435 | FLJ42969 |
| SE_02_066000631 | chr8:101044188-101127197 |
Sample_02_0660 | Mammary gland | MCF10DCIS | 631 | 19 | 2301 | 38 | 6 | 145 | 435 | FLJ42969 |
| SE_02_103100120 | chr8:101047870-101107313 |
Sample_02_1031 | Head and neck | SCC1 contol | 120 | 29 | 1640 | 21 | 3 | 111 | 435 | FLJ42969 |
| SE_02_066300745 | chr8:101049571-101055003 |
Sample_02_0663 | Thyroid | TT | 745 | 1 | 179 | 11 | 0 | 13 | 239 | FLJ42969 |
| SE_02_150900160 | chr8:101053369-101108475 |
Sample_02_1509 | Lung | H3122_LR | 160 | 22 | 1503 | 8 | 5 | 98 | 253 | FLJ42969 |
| SE_01_002500187 | chr8:101057432-101139588 |
Sample_01_0025 | Haematopoietic and lymphoid tissue blood | DND-41 | 187 | 13 | 2291 | 22 | 9 | 127 | 291 | FLJ42969 |
| SE_02_012800033 | chr8:101058456-101167513 |
Sample_02_0128 | Haematopoietic and lymphoid tissue | ALL-SIL | 33 | 33 | 3032 | 78 | 13 | 173 | 291 | FLJ42969,ZNF706 |
| SE_02_035400039 | chr8:101061279-101170315 |
Sample_02_0354 | Colon | Colo205 | 39 | 19 | 3021 | 80 | 13 | 176 | 291 | FLJ42969,ZNF706 |
| SE_02_024200704 | chr8:101061417-101099684 |
Sample_02_0242 | Colon | V481 | 704 | 6 | 1034 | 4 | 1 | 71 | 196 | FLJ42969 |
| SE_02_022800509 | chr8:101061611-101098841 |
Sample_02_0228 | Oesophagus | KYSE510 | 509 | 5 | 1002 | 3 | 1 | 70 | 196 | FLJ42969 |
| SE_02_050800018 | chr8:101061901-101160316 |
Sample_02_0508 | Esophagus | TT_1 | 18 | 34 | 2734 | 60 | 13 | 168 | 291 | FLJ42969,ZNF706 |
| SE_02_051800018 | chr8:101061901-101160316 |
Sample_02_0518 | Esophagus | TT_Esophagus carcinoma | 18 | 36 | 2734 | 60 | 13 | 168 | 291 | FLJ42969,ZNF706 |
| SE_02_151000074 | chr8:101061925-101128457 |
Sample_02_1510 | Lung | H3122_LR_Pano | 74 | 22 | 1814 | 12 | 6 | 105 | 196 | FLJ42969 |
| SE_01_005800525 | chr8:101061992-101110015 |
Sample_01_0058 | Prostate | PC-3 | 525 | 5 | 1299 | 3 | 5 | 77 | 196 | FLJ42969 |
| SE_02_113200193 | chr8:101062121-101099414 |
Sample_02_1132 | Pancreas | KLM1 wt | 193 | 16 | 1009 | 3 | 1 | 69 | 196 | FLJ42969,YWHAZ |
| SE_02_010500144 | chr8:101062135-101130921 |
Sample_02_0105 | Skin | neonatal_keratinocytes | 144 | 10 | 1882 | 14 | 8 | 109 | 196 | FLJ42969 |
| SE_02_103700027 | chr8:101062151-101101583 |
Sample_02_1037 | Pharynx | FaDu Control | 27 | 13 | 1067 | 3 | 1 | 69 | 196 | FLJ42969 |
| SE_02_006300316 | chr8:101062287-101099684 |
Sample_02_0063 | Skin | Keratinocytes | 316 | 6 | 1008 | 3 | 1 | 69 | 196 | FLJ42969 |
| SE_02_050400491 | chr8:101062350-101098244 |
Sample_02_0504 | Esophagus | KYSE510_1 | 491 | 11 | 954 | 3 | 1 | 69 | 196 | FLJ42969 |
| SE_02_153900050 | chr8:101062444-101160360 |
Sample_02_1539 | Nasopharyngeal | C666-1 | 50 | 33 | 2712 | 60 | 13 | 168 | 291 | FLJ42969,ZNF706 |
| SE_02_094700331 | chr8:101062453-101110324 |
Sample_02_0947 | Tongue | Cal27 | 331 | 9 | 1291 | 3 | 5 | 77 | 196 | FLJ42969,YWHAZ,ZNF706 |
| SE_02_103800069 | chr8:101062465-101101965 |
Sample_02_1038 | Pharynx | FaDu LPS | 69 | 16 | 1062 | 3 | 1 | 69 | 196 | FLJ42969 |
| SE_02_002100693 | chr8:101062470-101099789 |
Sample_02_0021 | Colon | V429 | 693 | 5 | 1002 | 3 | 1 | 69 | 196 | FLJ42969 |
| SE_02_094500079 | chr8:101062700-101099193 |
Sample_02_0945 | Brain | SF767 | 79 | 14 | 980 | 3 | 1 | 69 | 196 | FLJ42969 |
| SE_01_004100439 | chr8:101062758-101109480 |
Sample_01_0041 | Skin | keratinocyte | 439 | 8 | 1260 | 3 | 5 | 77 | 196 | FLJ42969 |
| SE_02_139700036 | chr8:101062777-101168373 |
Sample_02_1397 | Stomach | SNU16 | 36 | 18 | 2931 | 77 | 13 | 170 | 291 | FLJ42969,ZNF706 |
| SE_02_039600916 | chr8:101062792-101128204 |
Sample_02_0396 | Skin | NHEK-D | 916 | 15 | 1775 | 11 | 6 | 105 | 196 | FLJ42969 |
| SE_02_154000397 | chr8:101062933-101109643 |
Sample_02_1540 | Nasopharyngeal | HK1 | 397 | 13 | 1257 | 3 | 5 | 77 | 196 | FLJ42969 |
| SE_02_094800450 | chr8:101062938-101099463 |
Sample_02_0948 | Pharyng | Detroit562 | 450 | 6 | 982 | 3 | 1 | 69 | 196 | FLJ42969 |
| SE_02_136100913 | chr8:101062949-101099179 |
Sample_02_1361 | Bladder | UMUC1_sonic_pSIN-puro_WTUTX | 913 | 12 | 973 | 3 | 1 | 67 | 196 | FLJ42969 |
| SE_02_147000606 | chr8:101062952-101109462 |
Sample_02_1470 | Umbilical Vein | H441 | 606 | 7 | 1254 | 3 | 5 | 75 | 196 | FLJ42969 |
| SE_02_136200658 | chr8:101062964-101099323 |
Sample_02_1362 | Bladder | UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX | 658 | 13 | 977 | 3 | 1 | 67 | 196 | FLJ42969 |
| SE_02_102500119 | chr8:101062972-101138016 |
Sample_02_1025 | Esophagus | KYSE150 | 119 | 23 | 2101 | 18 | 9 | 112 | 234 | FLJ42969 |
| SE_02_060000490 | chr8:101062975-101109502 |
Sample_02_0600 | Mammary gland | MCF10A_p53shRNA_DMSO | 490 | 9 | 1255 | 3 | 5 | 75 | 196 | FLJ42969 |
| SE_02_154100535 | chr8:101062976-101109332 |
Sample_02_1541 | Nasopharyngeal | HNE1 | 535 | 13 | 1250 | 3 | 5 | 75 | 196 | FLJ42969 |
| SE_02_103000257 | chr8:101063013-101166585 |
Sample_02_1030 | Colon | DKO | 257 | 28 | 2878 | 75 | 13 | 166 | 291 | FLJ42969,ZNF706 |
| SE_02_125400246 | chr8:101063056-101109251 |
Sample_02_1254 | Bladder | Bladder tumor Basal1 | 246 | 10 | 1244 | 3 | 5 | 74 | 196 | FLJ42969 |
| SE_02_047900312 | chr8:101063103-101110633 |
Sample_02_0479 | Head and neck | SCC25 | 312 | 21 | 1283 | 3 | 5 | 65 | 196 | FLJ42969 |
| SE_02_088600550 | chr8:101063139-101174743 |
Sample_02_0886 | Skin | foreskin_ p63KLF4 | 550 | 28 | 3073 | 85 | 13 | 179 | 291 | FLJ42969,ZNF706 |
| SE_03_000100141 | chr8:101063237-101092576 |
Sample_03_0001 | Foreskin | foreskin-keratinocyte | 141 | 5 | 764 | 3 | 1 | 49 | 196 | FLJ42969 |
| SE_02_135800567 | chr8:101063289-101109256 |
Sample_02_1358 | Other | IC8-deltaEGF-L1596H_GSI_2h | 567 | 17 | 1233 | 3 | 5 | 64 | 196 | FLJ42969 |
| SE_02_048000684 | chr8:101063507-101109208 |
Sample_02_0480 | Gingival epithelial | HGEP | 684 | 13 | 1226 | 3 | 5 | 64 | 196 | FLJ42969,YWHAZ,ZNF706 |
| SE_02_064801095 | chr8:101063524-101109188 |
Sample_02_0648 | Tracheobronchial epithelial | HTBE_H3N2_03h | 1095 | 13 | 1222 | 3 | 5 | 64 | 196 | FLJ42969 |
| SE_02_068400049 | chr8:101063525-101127974 |
Sample_02_0684 | Lung | DMS79 | 49 | 14 | 1742 | 11 | 6 | 91 | 196 | FLJ42969 |
| SE_02_071900265 | chr8:101063627-101111922 |
Sample_02_0719 | Pancreas | SUIT2_TP63dN_DOX | 265 | 16 | 1291 | 5 | 5 | 64 | 196 | FLJ42969 |
| SE_02_105200143 | chr8:101066785-101099046 |
Sample_02_1052 | Esophagus | JH-EsoAd1 | 143 | 13 | 853 | 2 | 1 | 55 | 196 | FLJ42969 |
| SE_02_155100009 | chr8:101067030-101185854 |
Sample_02_1551 | Gastrointestinal Stromal | MaMel | 9 | 22 | 3224 | 91 | 14 | 189 | 291 | FLJ42969,ZNF706 |
| SE_02_071200667 | chr8:101067214-101109532 |
Sample_02_0712 | Pancreas | BxPC3_sgNEG | 667 | 14 | 1127 | 2 | 5 | 63 | 196 | FLJ42969 |
| SE_02_114500370 | chr8:101069943-101166484 |
Sample_02_1145 | Peripheral nerve | SNF02.2_PRC2 WT | 370 | 26 | 2676 | 74 | 13 | 136 | 291 | FLJ42969,ZNF706 |
| SE_02_099100065 | chr8:101071058-101161332 |
Sample_02_0991 | Breast cancer cell line lung metastatic variant | MDA-MB-231 LM2 | 65 | 18 | 2508 | 61 | 13 | 132 | 291 | FLJ42969,ZNF706 |
| SE_02_048101048 | chr8:101071244-101127973 |
Sample_02_0481 | Mammary gland | MDA-MB231 | 1048 | 16 | 1540 | 9 | 5 | 68 | 196 | FLJ42969 |
| SE_02_099000462 | chr8:101071354-101110642 |
Sample_02_0990 | Breast cancer brain metastatic variant | MDA-MB-231 BrM2 | 462 | 9 | 1064 | 1 | 4 | 41 | 196 | FLJ42969 |
| SE_02_065201034 | chr8:101072007-101109579 |
Sample_02_0652 | Tracheobronchial epithelial | HTBE_H3N2_mock | 1034 | 12 | 1008 | 1 | 4 | 41 | 196 | FLJ42969 |
| SE_02_076700686 | chr8:101072487-101098275 |
Sample_02_0767 | Ovary | OVCA429 | 686 | 24 | 672 | 1 | 0 | 32 | 196 | FLJ42969 |
Genomic distribution of SEs associated with FLJ42969