SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000099337
Gene: KCNK6 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:38319845-38332076 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122900547 chr19:38306175-38335551 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 547 14 786 88 1 82 1529 KCNK6,YIF1B,C19ORF33,PSMD8,SPINT2,CATSPERG,PPP1R14A,FAM98C,C19orf33,RASGRP4,SPRED3,DPF1
SE_02_109900533 chr19:38310793-38323691 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 533 7 315 34 1 46 366 KCNK6,YIF1B,C19ORF33,SPINT2,CATSPERG,SPRED3,PSMD8,DPF1,PPP1R14A,FAM98C
SE_04_000100721 chr19:38311004-38319344 Sample_04_0001 Blood heat shocked K562 721 1 210 27 1 21 157 YIF1B,C19ORF33,KCNK6,SPINT2,CATSPERG,SPRED3,PSMD8,DPF1,PPP1R14A,FAM98C
SE_04_000200777 chr19:38311211-38328795 Sample_04_0002 Blood cold shocked K562 777 3 446 56 1 63 875 KCNK6,YIF1B,C19ORF33,PSMD8,SPINT2,CATSPERG,SPRED3,DPF1,PPP1R14A,FAM98C
SE_02_113000482 chr19:38311509-38323636 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 482 5 299 34 1 46 366 KCNK6,YIF1B,C19ORF33,SPINT2,CATSPERG,SPRED3,PSMD8,DPF1,PPP1R14A,FAM98C
SE_02_111600289 chr19:38311574-38322362 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 289 2 265 32 1 46 366 KCNK6,YIF1B,C19ORF33,SPINT2,CATSPERG,SPRED3,PSMD8,DPF1,PPP1R14A,FAM98C
SE_02_098800830 chr19:38311592-38322066 Sample_02_0988 Blood K562_EPZ 830 5 258 32 1 46 366 KCNK6,YIF1B,C19ORF33,SPINT2,CATSPERG,SPRED3,PSMD8,DPF1,PPP1R14A,FAM98C
SE_02_054600414 chr19:38312732-38318894 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 414 2 162 21 1 21 157 YIF1B,C19ORF33,KCNK6,SPINT2,CATSPERG,SPRED3,PSMD8,DPF1,PPP1R14A,FAM98C
SE_02_054500627 chr19:38312791-38322190 Sample_02_0545 Bone marrow K562 WT 627 3 236 27 1 46 366 KCNK6,YIF1B,C19ORF33,SPINT2,CATSPERG,SPRED3,PSMD8,DPF1,PPP1R14A,FAM98C
SE_02_054700358 chr19:38312807-38318121 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 358 3 142 19 1 20 157 YIF1B,C19ORF33,KCNK6,SPINT2,CATSPERG,SPRED3,PSMD8,DPF1,PPP1R14A,FAM98C
Genomic distribution of SEs associated with KCNK6
Genome Browser

The strength of the tissue affected by the gene

Expression of KCNK6

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)