SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200777
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr19:38311211-38328795
Size: 17584
Super-enhancer rank 777
Number of SE elements: 3
ChIP density(Case|Control): 42303.5872|3052.5824
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KCNK6 ;
ROSE Overlap KCNK6 ; YIF1B ;
ROSE Proximal C19orf33 ; PSMD8 ; SPINT2 ; CATSPERG ; YIF1B ;
ROSE Closest KCNK6 ;
Lasso SPRED3 ; YIF1B ; SPINT2 ; PSMD8 ; DPF1 ; KCNK6 ; CATSPERG ; PPP1R14A ; FAM98C ;
PreSTIGE ;
ABC ;
BETA SPRED3 ; KCNK6 ; YIF1B ; SPINT2 ; C19orf33 ; PSMD8 ; PPP1R14A ; DPF1 ; FAM98C ; CATSPERG ; GGN ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200777 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers