SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800830
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr19:38311592-38322066
Size: 10474
Super-enhancer rank 830
Number of SE elements: 5
ChIP density(Case|Control): 12817.0338|1304.013
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: YIF1B ;
ROSE Overlap KCNK6 ; YIF1B ;
ROSE Proximal C19orf33 ; SPINT2 ; CATSPERG ; YIF1B ;
ROSE Closest YIF1B ;
Lasso SPRED3 ; YIF1B ; SPINT2 ; PSMD8 ; DPF1 ; KCNK6 ; CATSPERG ; PPP1R14A ; FAM98C ;
PreSTIGE ;
ABC ;
BETA SPRED3 ; KCNK6 ; YIF1B ; SPINT2 ; C19orf33 ; PSMD8 ; PPP1R14A ; DPF1 ; FAM98C ; CATSPERG ; GGN ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800830 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers