SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000092445
Gene: TYRO3 Gene type: protein_coding
Strand: + External links:
Genomic region: chr15:41557675-41583589 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_047600200 chr15:41549390-41589721 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 200 18 1044 93 3 255 2057 TYRO3,RPAP1,LTK
SE_02_075700086 chr15:41550595-41586663 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 86 9 908 75 3 255 2057 TYRO3,RPAP1,LTK
SE_02_120300417 chr15:41554230-41586069 Sample_02_1203 Brain NB1 417 8 790 62 2 254 2057 TYRO3,RPAP1,LTK
SE_02_120500530 chr15:41554325-41586067 Sample_02_1205 Brain NB3 530 12 790 62 2 254 2057 TYRO3,RPAP1,LTK,MGA,ITPKA
SE_02_117300266 chr15:41554600-41586680 Sample_02_1173 Brain GBM01 266 15 793 62 2 254 2057 TYRO3,RPAP1,LTK
SE_02_003900021 chr15:41557562-41571999 Sample_02_0039 Embryo AFG 21 1 344 28 1 180 1373 TYRO3,RPAP1,LTK
SE_02_033000110 chr15:41557643-41586200 Sample_02_0330 Endoderm MHG 110 4 697 53 2 245 2057 TYRO3,RPAP1,LTK
SE_02_117700702 chr15:41557679-41586093 Sample_02_1177 Brain GBM05 702 8 695 53 2 245 2057 TYRO3,RPAP1,LTK
SE_02_120200326 chr15:41557680-41586045 Sample_02_1202 Brain GBM38 326 9 695 53 2 245 2057 TYRO3,RPAP1,LTK
SE_02_119301157 chr15:41557694-41569093 Sample_02_1193 Brain GBM27 1157 2 274 22 1 145 991 TYRO3,RPAP1,LTK
SE_02_003801203 chr15:41557702-41565644 Sample_02_0038 Embryo DE 1203 1 188 10 0 106 681 TYRO3,RPAP1,LTK
SE_02_121300288 chr15:41557705-41586122 Sample_02_1213 Brain GBM31 288 7 696 53 2 245 2057 TYRO3,RPAP1,LTK
SE_02_081600574 chr15:41557713-41604484 Sample_02_0816 Ovary Clear cell ovarian cancer 574 28 1188 91 2 264 2057 TYRO3,RPAP1,LTK
SE_02_119600366 chr15:41557739-41586467 Sample_02_1196 Brain GBM32 366 12 704 53 2 245 2057 TYRO3,RPAP1,LTK
SE_02_119800380 chr15:41557742-41586058 Sample_02_1198 Brain GBM34 380 12 694 53 2 245 2057 TYRO3,RPAP1,LTK
SE_02_117900547 chr15:41557747-41586048 Sample_02_1179 Brain GBM08 547 7 693 53 2 245 2057 TYRO3,RPAP1,LTK
SE_02_121100226 chr15:41557771-41586063 Sample_02_1211 Brain GBM21 226 8 693 53 2 241 2057 TYRO3,RPAP1,LTK
SE_02_075300026 chr15:41557776-41592453 Sample_02_0753 Embryo ES-derived progenitors_FG type 26 9 869 71 2 241 2057 TYRO3,RPAP1,LTK
SE_02_075600056 chr15:41557817-41592459 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 56 8 868 71 2 236 2057 TYRO3,RPAP1,LTK
SE_02_119400860 chr15:41557874-41586079 Sample_02_1194 Brain GBM28 860 7 692 53 2 228 2057 TYRO3,RPAP1,LTK
SE_02_097000279 chr15:41558125-41586045 Sample_02_0970 Brain H3.3K27M_XHSJ019-X1-1-Rx_xenograft 279 5 690 53 2 220 2057 TYRO3,RPAP1,LTK
SE_02_096200290 chr15:41558211-41585930 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 290 7 686 51 2 220 2057 TYRO3,RPAP1,LTK
SE_02_121200419 chr15:41559043-41585887 Sample_02_1212 Brain GBM30 419 8 664 51 2 209 1993 TYRO3,RPAP1,LTK
SE_02_001800307 chr15:41559386-41569379 Sample_02_0018 Embryo NEC 307 2 254 24 1 97 837 TYRO3,RPAP1,LTK
SE_02_004400313 chr15:41559403-41565573 Sample_02_0044 Embryo endodermal CyT49_ES_D5 313 1 161 10 0 56 498 TYRO3,RPAP1,LTK
SE_02_118100797 chr15:41559418-41586054 Sample_02_1181 Brain GBM10 797 11 668 53 2 194 1867 TYRO3,RPAP1,LTK
SE_02_120400541 chr15:41559422-41586074 Sample_02_1204 Brain NB2 541 8 668 53 2 194 1866 TYRO3,RPAP1,LTK,MGA,ITPKA
SE_02_003601425 chr15:41560354-41566155 Sample_02_0036 Embryo H7 1425 1 151 8 0 51 449 TYRO3,RPAP1,LTK
SE_00_002900756 chr15:41560443-41565356 Sample_00_0029 Ovary ovary 756 2 127 8 0 51 449 TYRO3,RPAP1,LTK
SE_02_101300305 chr15:41560566-41585919 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 305 14 637 49 2 190 1825 TYRO3,RPAP1,LTK
SE_02_004000717 chr15:41560603-41569509 Sample_02_0040 Embryo PFG 717 2 229 22 1 87 782 TYRO3,RPAP1,LTK
SE_02_100400120 chr15:41560758-41569850 Sample_02_1004 Brain Lateral temporal lobe_10T_Old 120 5 235 24 1 81 784 TYRO3,RPAP1,LTK
SE_02_100000200 chr15:41560868-41585876 Sample_02_1000 Brain Lateral temporal lobe_15T_Young 200 10 631 49 2 180 1825 TYRO3,RPAP1,LTK
SE_02_101100116 chr15:41560984-41585439 Sample_02_1011 Brain Lateral temporal lobe_5T_AD 116 5 618 48 2 179 1811 TYRO3,RPAP1,LTK
SE_00_004800084 chr15:41561022-41569555 Sample_00_0048 Embryo neuronal stem cell originated from H1 84 8 223 22 1 80 764 TYRO3,RPAP1,LTK
SE_02_100500241 chr15:41561044-41570274 Sample_02_1005 Brain Lateral temporal lobe_11T_Old 241 8 235 24 1 91 860 TYRO3,RPAP1,LTK
SE_02_100700285 chr15:41561051-41569193 Sample_02_1007 Brain Lateral temporal lobe_14T_Old 285 5 212 20 1 80 755 TYRO3,RPAP1,LTK
SE_02_138400636 chr15:41561111-41570916 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 636 4 254 25 1 100 970 TYRO3,RPAP1,LTK
SE_02_100300072 chr15:41561116-41569796 Sample_02_1003 Brain Lateral temporal lobe_19T_Young 72 5 227 24 1 80 752 TYRO3,RPAP1,LTK
SE_02_004900201 chr15:41561141-41570213 Sample_02_0049 Embryo endodermal CyT49_GTtoH 201 1 234 24 1 89 832 TYRO3,RPAP1,LTK
SE_02_032800582 chr15:41561143-41571004 Sample_02_0328 Embryo H9_naive 582 2 260 26 1 100 982 TYRO3,RPAP1,LTK
SE_02_101500604 chr15:41561292-41585870 Sample_02_1015 Embryo H9_ Undifferentiated 604 5 625 49 2 180 1758 TYRO3,RPAP1,LTK
SE_01_005100338 chr15:41561324-41569557 Sample_01_0051 Embryo neural-progenitor-cell 338 2 221 22 1 79 705 TYRO3,RPAP1,LTK
SE_02_068000361 chr15:41561337-41569090 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 361 7 208 20 1 79 676 TYRO3,RPAP1,LTK
SE_02_055800213 chr15:41561355-41585906 Sample_02_0558 iPSCs FX52 iPSCs mock 213 8 624 49 2 179 1738 TYRO3,RPAP1,LTK
SE_02_068100352 chr15:41561380-41569188 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 352 7 206 20 1 79 684 TYRO3,RPAP1,LTK
SE_02_075500953 chr15:41561415-41575516 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 953 4 361 28 1 151 1375 TYRO3,RPAP1,LTK
SE_02_075201116 chr15:41561438-41591971 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 1116 7 791 69 2 178 1717 TYRO3,RPAP1,LTK
SE_02_100900278 chr15:41561519-41585985 Sample_02_1009 Brain Lateral temporal lobe_2T_AD 278 11 619 50 2 177 1705 TYRO3,RPAP1,LTK
SE_02_055900265 chr15:41561551-41569753 Sample_02_0559 iPSCs FX52 iPSCs dC-T 265 4 214 24 1 77 656 TYRO3,RPAP1,LTK
SE_02_116000198 chr15:41561558-41585741 Sample_02_1160 Embryo H1_shLuc 198 7 608 48 2 177 1698 TYRO3,RPAP1,LTK,MGA
SE_02_049300340 chr15:41561587-41585661 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 340 7 604 48 2 176 1688 TYRO3,RPAP1,LTK
SE_02_096700922 chr15:41561784-41586146 Sample_02_0967 Brain H3.3K27M_JN57 922 6 614 51 2 176 1653 TYRO3,RPAP1,LTK
SE_02_041800182 chr15:41561802-41569429 Sample_02_0418 Embryo H9_Null+EZH2 182 3 197 22 1 76 605 TYRO3,RPAP1,LTK
SE_02_152700282 chr15:41561831-41606278 Sample_02_1527 Embryo naive embryonic stem cell 282 16 1136 93 2 204 1645 TYRO3,RPAP1,LTK
SE_02_075400415 chr15:41561943-41587399 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 415 6 642 51 2 175 1645 TYRO3,RPAP1,LTK
SE_02_074501212 chr15:41561945-41574912 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 1212 7 329 28 1 143 1296 TYRO3,RPAP1,LTK
SE_02_046501113 chr15:41561993-41586434 Sample_02_0465 Adipose subcutaneous adipocytes 1113 10 611 51 2 175 1645 TYRO3,RPAP1,LTK
SE_02_074200405 chr15:41561997-41569243 Sample_02_0742 Embryo ESCs_day0 405 6 183 20 1 75 602 TYRO3,RPAP1,LTK
SE_02_052400333 chr15:41561999-41585874 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 333 10 595 49 2 175 1645 TYRO3,RPAP1,LTK,RTF1
SE_02_049400797 chr15:41562027-41591191 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 797 7 750 68 2 174 1645 TYRO3,RPAP1,LTK
SE_01_009500818 chr15:41562066-41579212 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 818 4 437 35 1 163 1597 TYRO3,RPAP1,LTK
SE_02_116100349 chr15:41562126-41570072 Sample_02_1161 Embryo H1_shZNF587 349 6 198 24 1 73 657 TYRO3,RPAP1,LTK
SE_02_052500315 chr15:41562126-41585967 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 315 11 598 50 2 170 1645 TYRO3,RPAP1,LTK,RTF1
SE_00_002400877 chr15:41562368-41569475 Sample_00_0024 Embryo mesendoderm 877 2 182 22 1 70 600 TYRO3,RPAP1,LTK
SE_02_067900523 chr15:41562455-41569733 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 523 7 184 24 1 69 586 TYRO3,RPAP1,LTK
SE_02_125500291 chr15:41562529-41591256 Sample_02_1255 Bladder Bladder tumor Luminal2 291 11 737 68 2 169 1621 TYRO3,RPAP1,LTK
SE_02_056000311 chr15:41562536-41569560 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 311 6 177 22 1 68 575 TYRO3,RPAP1,LTK
SE_02_067800579 chr15:41562560-41569042 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 579 6 166 20 1 68 538 TYRO3,RPAP1,LTK
SE_00_005300384 chr15:41562573-41616151 Sample_00_0053 Embryo trophoblast cell originated from H1 384 21 1369 111 3 217 1613 TYRO3,MGA,LTK,RPAP1
SE_02_101200144 chr15:41562647-41568372 Sample_02_1012 Brain Lateral temporal lobe_8T_AD 144 2 151 19 1 47 400 TYRO3,RPAP1,LTK
SE_02_074400258 chr15:41562742-41585626 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 258 8 571 48 2 164 1573 TYRO3,RPAP1,LTK
SE_01_011600055 chr15:41564028-41569095 Sample_01_0116 Embryo H1-hESC 55 3 128 18 1 51 480 TYRO3,RPAP1
SE_02_041700378 chr15:41564665-41568563 Sample_02_0417 Embryo H9_Null 378 2 105 16 1 22 299 TYRO3,RPAP1
SE_02_004800398 chr15:41565594-41570233 Sample_02_0048 Embryo endodermal CyT49_HE 398 1 109 16 1 48 422 TYRO3,RPAP1
SE_02_004400086 chr15:41565605-41570257 Sample_02_0044 Embryo endodermal CyT49_ES_D5 86 1 109 16 1 49 428 TYRO3,RPAP1
SE_02_003601325 chr15:41566162-41570866 Sample_02_0036 Embryo H7 1325 1 116 17 1 59 541 TYRO3,RPAP1
SE_02_003801399 chr15:41566344-41569484 Sample_02_0038 Embryo DE 1399 1 80 14 1 39 333 TYRO3,RPAP1
SE_02_004500672 chr15:41567015-41569491 Sample_02_0045 Embryo endodermal CyT49_ES_D7 672 1 62 10 1 37 333 TYRO3,RPAP1
SE_02_004300577 chr15:41567093-41569487 Sample_02_0043 Embryo endodermal CyT49_ES_D2 577 1 61 10 1 37 333 TYRO3,RPAP1
SE_02_004600666 chr15:41567101-41569705 Sample_02_0046 Embryo endodermal CyT49_ES_D10 666 1 66 12 1 37 333 TYRO3,RPAP1
SE_02_143500307 chr15:41567314-41621974 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 307 9 1407 109 4 246 1437 TYRO3,RPAP1,MGA
SE_02_143400324 chr15:41567413-41621984 Sample_02_1434 Trophoblast trophoblast stem cells 324 7 1406 109 4 243 1415 TYRO3,RPAP1,MGA
SE_02_093001526 chr15:41580862-41606030 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1526 15 645 55 0 30 0 TYRO3,RPAP1,LTK,ITPKA,MGA
Genomic distribution of SEs associated with TYRO3
Genome Browser

The strength of the tissue affected by the gene

Expression of TYRO3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)