SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000124120
Gene: TTPAL Gene type: protein_coding
Strand: + External links:
Genomic region: chr20:44475874-44494603 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_024200532 chr20:44432858-44477175 Sample_02_0242 Colon V481 532 9 1167 62 4 91 398 TTPAL,SERINC3,HNF4A,MIR3646
SE_02_032500341 chr20:44460089-44473242 Sample_02_0325 Liver hepatocytes_d1 341 1 350 8 0 20 254 TTPAL,SERINC3
SE_02_039900107 chr20:44460730-44478674 Sample_02_0399 Mammary gland SUM159PT-BT-474 107 2 469 17 0 37 417 TTPAL,SERINC3
SE_02_040100504 chr20:44460789-44474142 Sample_02_0401 Mammary gland SUM159PT-T47D 504 3 343 10 0 21 254 TTPAL,SERINC3
SE_02_046500490 chr20:44461060-44497022 Sample_02_0465 Adipose subcutaneous adipocytes 490 21 918 47 3 89 1446 TTPAL,C20ORF62,SERINC3,PKIG,LINC01430
SE_02_046600510 chr20:44461179-44502834 Sample_02_0466 Adipose visceral adipocytes 510 37 1049 54 3 103 1629 TTPAL,SERINC3,C20ORF62,PKIG,LINC01430
SE_02_032600948 chr20:44463971-44472540 Sample_02_0326 Liver hepatocytes_d3 948 1 233 7 0 17 75 TTPAL,SERINC3
SE_01_009200936 chr20:44465037-44498418 Sample_01_0092 Vagina vagina 936 7 845 49 3 88 1267 SERINC3,TTPAL,PKIG
SE_01_009400908 chr20:44467406-44522873 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 908 17 1383 82 3 132 1892 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_01_009700590 chr20:44467425-44523372 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 590 13 1391 82 3 132 1892 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_010500588 chr20:44480907-44506262 Sample_02_0105 Skin neonatal_keratinocytes 588 4 615 39 3 62 1178 SERINC3,TTPAL,PKIG
SE_02_045200921 chr20:44483424-44502410 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 921 5 471 31 3 48 1094 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_017100295 chr20:44485457-44503468 Sample_02_0171 Lung IMR-90_proliferating 295 5 449 29 3 34 1042 SERINC3,TTPAL,PKIG
SE_02_063600719 chr20:44485770-44502483 Sample_02_0636 Skin BJ5ta 719 9 423 28 3 34 1042 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_01_001800109 chr20:44489564-44502593 Sample_01_0018 Submandibular Salivary Gland ACC112 109 2 317 23 3 23 911 SERINC3,TTPAL,PKIG
SE_02_093600294 chr20:44489780-44501381 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 294 4 276 23 3 21 875 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_093800276 chr20:44490017-44502175 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 276 6 287 22 3 23 852 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_01_005600240 chr20:44490692-44503118 Sample_01_0056 Bone osteoblast 240 2 287 22 3 23 768 SERINC3,TTPAL,PKIG
SE_02_138000262 chr20:44490728-44502865 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 262 11 282 21 3 23 763 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_072700935 chr20:44490919-44502519 Sample_02_0727 Fetal lung IMR90_Etoposide 935 5 274 21 3 23 733 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_009300369 chr20:44490932-44498185 Sample_02_0093 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_6 369 2 171 16 3 9 528 SERINC3,TTPAL,PKIG
SE_02_009900247 chr20:44491008-44502209 Sample_02_0099 Foreskin Epidermal-Stem-Cells_shDNMT3B 247 3 263 21 3 23 718 SERINC3,TTPAL,PKIG
SE_01_005800086 chr20:44491048-44501025 Sample_01_0058 Prostate PC-3 86 1 233 21 3 15 661 SERINC3,TTPAL,PKIG
SE_01_001900358 chr20:44491069-44502567 Sample_01_0019 Brain and spinal cord astrocyte 358 3 271 21 3 23 712 SERINC3,TTPAL,PKIG
SE_02_017500218 chr20:44491078-44502869 Sample_02_0175 Lung IMR-90_Etoposide 218 8 275 22 3 23 711 SERINC3,TTPAL,PKIG
SE_02_126600921 chr20:44491114-44498199 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 921 1 166 16 3 9 505 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_113700602 chr20:44491128-44501513 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 602 2 243 21 3 21 705 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_088301196 chr20:44491132-44502524 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 1196 3 269 21 3 23 704 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_137800570 chr20:44491133-44502665 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 570 5 270 21 3 23 704 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_145200408 chr20:44491172-44501499 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 408 3 241 21 3 21 694 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_137700990 chr20:44491188-44501575 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 990 5 242 21 3 21 686 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_126701338 chr20:44491192-44498104 Sample_02_1267 Bone Im-GCT-4072_G34W 1338 2 161 15 3 9 484 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_126001020 chr20:44491211-44497924 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 1020 2 159 14 3 9 484 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_145100403 chr20:44491223-44502184 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 403 3 257 21 3 23 684 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_137900322 chr20:44491248-44502345 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 322 7 263 21 3 23 684 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_145400634 chr20:44491273-44502030 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 634 3 252 21 3 23 680 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_001001039 chr20:44491302-44498345 Sample_02_0010 Kidney A-498_emptyvector 1039 2 168 15 3 9 474 SERINC3,TTPAL,PKIG
SE_02_087901371 chr20:44491338-44502911 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 1371 3 271 21 3 23 673 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_047401145 chr20:44491495-44497831 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1145 2 153 13 3 9 463 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_136400424 chr20:44491509-44502554 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 424 7 263 20 3 23 663 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_126301335 chr20:44491511-44498237 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1335 2 158 15 3 9 460 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_066600312 chr20:44491524-44498147 Sample_02_0666 Prostate RWPE1 Lacz rep1 312 3 156 14 3 9 459 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_135900455 chr20:44491602-44500569 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 455 6 218 20 3 14 574 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_044801026 chr20:44491605-44498320 Sample_02_0448 Bone MNNG 1026 4 160 15 3 8 450 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_105400777 chr20:44492148-44498328 Sample_02_1054 Esophagus SKGT4 777 3 142 14 3 7 370 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_135800436 chr20:44492562-44498983 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 436 3 154 16 3 7 311 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_127200597 chr20:44493670-44502095 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 597 5 185 14 3 21 379 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_123000551 chr20:44493714-44498304 Sample_02_1230 Lung PC9 551 2 96 9 3 7 173 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_01_004100202 chr20:44493812-44498356 Sample_01_0041 Skin keratinocyte 202 1 94 9 3 7 155 SERINC3,TTPAL,PKIG
SE_03_000300181 chr20:44493850-44498510 Sample_03_0003 Foreskin foreskin-keratinocyte-calcium5.5day 181 1 101 11 3 7 150 SERINC3,TTPAL,PKIG
SE_01_004500300 chr20:44493852-44498458 Sample_01_0045 Mammary gland mammary-epithelial-cell 300 1 96 11 3 7 150 SERINC3,TTPAL,PKIG
SE_02_153400458 chr20:44493922-44498191 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 458 1 87 9 3 7 136 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_01_006200206 chr20:44493945-44498166 Sample_01_0062 Prostate RWPE2 206 1 86 9 3 7 133 SERINC3,TTPAL,PKIG
SE_03_000100245 chr20:44494003-44498515 Sample_03_0001 Foreskin foreskin-keratinocyte 245 1 97 11 3 7 126 SERINC3,TTPAL,PKIG
SE_03_000200257 chr20:44494143-44498350 Sample_03_0002 Foreskin foreskin-keratinocyte-calcium2.5day 257 1 87 9 3 7 117 SERINC3,TTPAL,PKIG
SE_02_026801070 chr20:44494165-44498427 Sample_02_0268 Kidney A-498 1070 1 86 9 3 7 117 SERINC3,TTPAL,PKIG
SE_02_123300459 chr20:44494442-44498133 Sample_02_1233 Lung PC9_miR-4497 mimic 459 1 69 6 2 5 85 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_123100393 chr20:44494576-44498288 Sample_02_1231 Lung PC9_siMED13L-1 393 2 71 7 2 3 81 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_123200422 chr20:44494586-44497849 Sample_02_1232 Lung PC9_siMED13L-2 422 2 64 5 2 3 80 TTPAL,SERINC3,PKIG,C20ORF62,LINC01430
SE_02_066500100 chr20:44494846-44498334 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 100 1 69 7 2 3 54 SERINC3,PKIG,C20ORF62,TTPAL,LINC01430
SE_02_046900531 chr20:44494852-44497916 Sample_02_0469 Kidney 786-O PBRM1 shRNA#2 531 3 62 5 2 3 54 SERINC3,PKIG,C20ORF62,TTPAL,LINC01430
Genomic distribution of SEs associated with TTPAL
Genome Browser

The strength of the tissue affected by the gene

Expression of TTPAL

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)