SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001001039
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr20:44491302-44498345
Size: 7043
Super-enhancer rank 1039
Number of SE elements: 2
ChIP density(Case|Control): 31265.9899|457.0907
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TTPAL ;
ROSE Overlap SERINC3 ; TTPAL ;
ROSE Proximal TTPAL ; SERINC3 ; PKIG ;
ROSE Closest TTPAL ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C20orf62 ; SERINC3 ; PKIG ; HNF4A ; TTPAL ; LINC01430 ; HNF4A-AS1 ; MIR3646 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001001039 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers