Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_006200123 chr1:120287026-120290864 3838 123 1 0 0 0 14 0 NBPF9,LOC653513,PDE4DIP
SE_01_006200256 chr1:146211240-146222396 11156 256 3 26 0 0 84 37 NOTCH2NL
SE_01_006200132 chr1:148898909-148902724 3815 132 1 13 0 0 14 0 PDE4DIP
SE_01_006200167 chr1:150561135-150577138 16003 167 7 413 42 3 55 268 MCL1,MIR4257,ADAMTSL4
SE_01_006200191 chr1:150604079-150625219 21140 191 5 514 41 2 38 410 ENSA,MCL1
SE_01_006200060 chr1:151987771-152001901 14130 60 3 325 41 1 50 346 S100A10,S100A11
SE_01_006200142 chr1:152023082-152049341 26259 142 4 577 57 3 41 433 S100A11,TCHHL1,S100A10
SE_01_006200168 chr1:153562487-153568688 6201 168 2 182 10 0 38 285 S100A2,S100A5,S100A3,S100A14,S100A16,S100A4,S100A6
SE_01_006200112 chr1:156117966-156130626 12660 112 5 344 44 0 80 392 LMNA,SEMA4A,MEX3A
SE_01_006200027 chr1:16138197-16159892 21695 27 8 572 44 0 182 525 EPHA2
SE_01_006200250 chr1:181089916-181114154 24238 250 3 658 34 1 226 161 IER5
SE_01_006200130 chr1:183138525-183166353 27828 130 5 750 63 13 92 392 LAMC1,LAMC2
SE_01_006200125 chr1:207006540-207031813 25273 125 5 782 64 0 90 1041 C1ORF116,FCAMR,YOD1,PFKFB2
SE_01_006200216 chr1:209364013-209390042 26029 216 7 745 42 0 144 0 MIR205,LOC642587
SE_01_006200080 chr1:209403439-209435541 32102 80 8 945 47 9 117 291 MIR205,LOC642587
SE_01_006200163 chr1:26848534-26866122 17588 163 5 443 33 0 179 1287 SFN,ZDHHC18,GPN2,GPATCH3,NR0B2
SE_01_006200212 chr1:26996404-27010990 14586 212 5 376 19 0 119 713 TRNP1,FAM46B,C1ORF172
SE_01_006200241 chr1:32757684-32762060 4376 241 1 113 3 0 44 0 KIAA1522
SE_01_006200136 chr1:37470935-37487164 16229 136 4 504 23 0 124 1228 ZC3H12A,MEAF6
SE_01_006200178 chr1:40875125-40899714 24589 178 4 643 65 2 76 101 CITED4
SE_01_006200044 chr1:42923957-42968001 44044 44 7 1293 154 5 224 1262 FLJ32224,SLC2A1
SE_01_006200083 chr1:8061456-8098630 37174 83 7 897 60 3 88 0 ERRFI1
SE_01_006200166 chr1:93771543-93781321 9778 166 5 257 54 1 19 67 MIR760
SE_01_006200222 chr1:94322204-94327723 5519 222 2 134 9 1 21 0 ARHGAP29
SE_01_006200119 chr1:94538228-94554641 16413 119 3 415 14 3 75 339 F3
SE_01_006200237 chr1:9881996-9894369 12373 237 3 338 13 0 18 91 CTNNBIP1,NMNAT1,LZIC
SE_01_006200199 chr10:119655036-119687842 32806 199 5 1050 112 2 136 539 BAG3,INPP5F
SE_01_006200240 chr10:3089553-3108812 19259 240 5 993 66 6 31 701 PFKP
SE_01_006200137 chr10:3757368-3785289 27921 137 6 832 41 4 244 967 KLF6
SE_01_006200207 chr10:49549933-49554967 5034 207 2 136 14 0 0 0 PGBD3,ERCC6
SE_01_006200242 chr10:52442551-52453983 11432 242 3 296 9 0 12 67 DKK1
SE_01_006200018 chr10:72244118-72278294 34176 18 6 937 94 1 191 475 DDIT4,ANAPC16,ASCC1
SE_01_006200055 chr10:72315103-72336141 21038 55 7 598 34 0 80 686 DNAJB12,DDIT4
SE_01_006200133 chr10:73886232-73908774 22542 133 5 590 89 3 104 0 PLAU,CAMK2G,C10ORF55
SE_01_006200026 chr10:93435985-93476820 40835 26 10 1169 147 6 99 83 MYOF,CEP55
SE_01_006200050 chr11:118912364-118929223 16859 50 6 390 31 2 268 0 CXCR5,BCL9L,UPK2,FOXR1
SE_01_006200059 chr11:12065552-12092140 26588 59 5 854 80 4 80 0 MICAL2
SE_01_006200075 chr11:12163318-12190658 27340 75 7 864 67 3 51 0 MICAL2
SE_01_006200068 chr11:122158675-122197312 38637 68 11 1007 29 5 182 31 LOC399959,MIR100,MIRLET7A2,BLID
SE_01_006200200 chr11:128206356-128211640 5284 200 1 146 8 1 4 0 ETS1
SE_01_006200019 chr11:132063880-132074077 10197 19 4 375 16 4 35 0 NTM
SE_01_006200054 chr11:33688528-33704048 15520 54 3 458 42 2 45 568 CD59,C11ORF91
SE_01_006200056 chr11:62540841-62560674 19833 56 5 471 36 2 208 354 AHNAK,EEF1G,TUT1,MTA2
SE_01_006200104 chr11:64841931-64871275 29344 104 5 902 75 0 171 1065 CDC42BPG,EHD1,ATG2A,MEN1,MAP4K2,MIR192,MIR194-2
SE_01_006200063 chr11:65476977-65508159 31182 63 6 931 87 4 44 963 MALAT1,MIR612,SCYL1
SE_01_006200228 chr11:94128202-94149849 21647 228 4 631 68 2 23 217 PANX1
SE_01_006200033 chr12:120228491-120263739 35248 33 8 901 59 0 108 119 PXN,GCN1L1,SIRT4,RPLP0
SE_01_006200010 chr12:124910653-124941114 30461 10 4 1110 35 4 71 1108 UBC,SCARB1,DHX37
SE_01_006200224 chr12:131623889-131628089 4200 224 2 100 3 0 6 0 SFSWAP
SE_01_006200221 chr12:46429661-46446543 16882 221 4 428 45 0 39 0 SLC38A2
SE_01_006200189 chr12:47266797-47279371 12574 189 3 310 29 0 19 0 LOC100233209
SE_01_006200139 chr12:50201119-50222466 21347 139 5 486 31 1 54 210 LIMA1,LASS5,MIR1293
SE_01_006200096 chr12:52143992-52157401 13409 96 6 426 18 0 28 0 KRT80
SE_01_006200036 chr12:52229411-52249475 20064 36 6 580 44 2 72 1166 KRT7,KRT80,LOC283404,KRT81
SE_01_006200084 chr12:52516438-52526176 9738 84 2 387 32 1 9 552 KRT5,KRT6C,KRT6A,KRT71,KRT74
SE_01_006200176 chr12:6370322-6377886 7564 176 2 220 14 0 40 477 SCNN1A,LTBR,TNFRSF1A
SE_01_006200038 chr12:65630280-65672339 42059 38 8 1178 44 0 143 0 HMGA2
SE_01_006200233 chr12:95199505-95206869 7364 233 4 145 11 0 15 0 FGD6,VEZT
SE_01_006200235 chr13:109147555-109157680 10125 235 2 295 21 0 16 0 MYO16,IRS2
SE_01_006200153 chr13:109243427-109273568 30141 153 9 953 108 5 41 0 IRS2
SE_01_006200127 chr13:113836838-113864507 27669 127 3 962 137 5 28 1340 GAS6,FLJ44054
SE_01_006200218 chr13:113895901-113914612 18711 218 4 482 40 1 0 215 FLJ44054,GAS6
SE_01_006200184 chr14:104680297-104690795 10498 184 2 373 26 0 18 174 INF2,ADSSL1
SE_01_006200172 chr14:104967215-104974689 7474 172 2 250 15 0 44 115 AHNAK2,PLD4,CDCA4,C14ORF79
SE_01_006200124 chr14:105022511-105033367 10856 124 3 234 42 0 0 0 AHNAK2,CDCA4,GPR132,C14ORF79
SE_01_006200117 chr14:22836087-22853717 17630 117 4 517 45 4 226 1455 MMP14,SLC7A7,MRPL52,LRP10,REM2
SE_01_006200045 chr14:22973787-22983379 9592 45 2 259 17 0 133 923 JUB,PRMT5,C14ORF93,HAUS4
SE_01_006200097 chr14:49999109-50024706 25597 97 4 733 70 5 48 698 C14ORF182
SE_01_006200088 chr14:51382453-51399433 16980 88 2 541 21 5 60 0 FRMD6
SE_01_006200034 chr14:51531971-51565302 33331 34 8 922 43 5 62 104 FRMD6
SE_01_006200214 chr14:54651629-54685106 33477 214 6 931 20 1 147 0 SAMD4A
SE_01_006200109 chr14:61523596-61539232 15636 109 3 472 30 8 59 109 PRKCH,HIF1A
SE_01_006200031 chr14:61553716-61587499 33783 31 6 920 43 7 108 913 HIF1A
SE_01_006200129 chr14:64706395-64727443 21048 129 8 545 54 3 86 0 PLEKHG3
SE_01_006200074 chr14:68458047-68477725 19678 74 5 453 23 0 0 86 RAD51L1,ZFP36L1
SE_01_006200053 chr14:68534500-68551609 17109 53 4 395 26 2 122 0 RAD51L1,ZFP36L1
SE_01_006200025 chr14:68674504-68706848 32344 25 7 902 37 8 132 0 ZFP36L1
SE_01_006200016 chr14:68783898-68796990 13092 16 1 397 10 6 250 1034 C14ORF181,ZFP36L1
SE_01_006200118 chr14:68939432-68955610 16178 118 7 473 39 3 47 0 ACTN1
SE_01_006200057 chr14:73740622-73759547 18925 57 5 465 61 1 82 118 C14ORF43,PNMA1
SE_01_006200012 chr14:74565205-74585042 19837 12 3 550 59 6 38 0 LTBP2
SE_01_006200032 chr14:74609730-74622057 12327 32 3 310 16 0 87 328 LTBP2
SE_01_006200165 chr14:76946867-76961895 15028 165 5 394 29 0 83 0 C14ORF4
SE_01_006200227 chr14:77032343-77043513 11170 227 4 251 19 3 196 0 C14ORF4
SE_01_006200252 chr14:93041433-93045736 4303 252 1 117 7 0 11 0 ITPK1,ITPK1-AS1
SE_01_006200017 chr15:100711945-100724602 12657 17 3 434 15 1 31 0 ASB7
SE_01_006200095 chr15:29919907-29939131 19224 95 6 574 46 3 32 0 TJP1
SE_01_006200011 chr15:39172026-39213740 41714 11 10 1207 26 3 127 0 C15ORF54
SE_01_006200151 chr15:39579098-39583716 4618 151 1 121 6 0 19 421 THBS1
SE_01_006200037 chr15:45636852-45649493 12641 37 4 307 64 1 25 0 SQRDL,PLDN
SE_01_006200078 chr15:55896001-55918025 22024 78 4 559 74 3 91 151 NEDD4
SE_01_006200093 chr15:59283188-59307390 24202 93 6 796 24 2 54 0 MYO1E
SE_01_006200004 chr15:60369807-60428015 58208 4 10 1575 132 6 143 750 ANXA2,NARG2
SE_01_006200217 chr15:62894010-62898125 4115 217 2 138 9 1 12 0 MIR190
SE_01_006200035 chr15:67104584-67128416 23832 35 4 696 47 4 73 80 SMAD3
SE_01_006200187 chr15:71042190-71052551 10361 187 3 246 8 0 24 89 LRRC49,CT62
SE_01_006200067 chr15:71113548-71137267 23719 67 5 609 22 2 104 233 CT62,THSD4
SE_01_006200047 chr15:71275690-71298010 22320 47 3 625 20 8 80 0 THSD4,CT62
SE_01_006200204 chr15:71443692-71449010 5318 204 2 154 2 0 19 0 THSD4,CT62
SE_01_006200021 chr15:72223306-72238330 15024 21 3 347 32 0 54 386 PKM2,GRAMD2,PARP6
SE_01_006200099 chr15:74382584-74407490 24906 99 4 694 59 1 85 0 CYP11A1,SEMA7A
SE_01_006200041 chr15:75646851-75673719 26868 41 4 702 50 3 185 1047 SNX33,IMP3,CSPG4,SNUPN
SE_01_006200108 chr15:83282440-83289825 7385 108 2 192 11 0 39 304 BNC1
SE_01_006200185 chr15:83304678-83323318 18640 185 3 446 16 0 109 0 BNC1
SE_01_006200155 chr15:89100344-89121632 21288 155 4 648 33 1 60 291 ABHD2
SE_01_006200144 chr15:89820645-89849410 28765 144 6 830 75 13 38 885 C15ORF38-AP3S2,AP3S2,MESP2,ANPEP
SE_01_006200186 chr15:90001876-90016929 15053 186 2 407 22 0 44 0 ZNF710
SE_01_006200245 chr15:90210600-90214088 3488 245 1 127 15 0 35 0 SEMA4B,C15ORF58,TTLL13,CIB1
SE_01_006200076 chr15:90399863-90420893 21030 76 4 593 81 1 57 0 IQGAP1,ZNF774
SE_01_006200254 chr15:92804055-92833237 29182 254 6 897 18 0 46 0 LOC100507217,ASB9P1
SE_01_006200030 chr15:98851334-98875186 23852 30 4 711 15 2 107 0 IGF1R,PGPEP1L
SE_01_006200042 chr15:98888302-98907367 19065 42 3 611 8 3 85 391 IGF1R,PGPEP1L
SE_01_006200248 chr16:21768024-21781513 13489 248 2 211 18 0 11 0 RRN3P1
SE_01_006200249 chr16:53079516-53100440 20924 249 6 550 28 1 140 86 CHD9
SE_01_006200115 chr16:56605590-56615608 10018 115 3 288 34 0 21 230 MT2A,MT4,MT1E,MT1A,MT3,MT1DP,MT1M,MT1L,MT1B,MT1JP,MT1F
SE_01_006200238 chr16:68657109-68669419 12310 238 7 323 25 0 23 0 CDH3
SE_01_006200101 chr16:81499294-81531807 32513 101 8 1208 26 9 77 0 CMIP
SE_01_006200160 chr16:82627327-82638659 11332 160 3 496 14 7 50 0 CDH13
SE_01_006200225 chr16:84984714-85005541 20827 225 5 782 116 3 24 222 ZDHHC7,KIAA0513
SE_01_006200234 chr16:85745271-85753780 8509 234 3 295 18 0 17 169 C16ORF74,COX4NB,MIR1910,COX4I1
SE_01_006200231 chr17:17823828-17841572 17744 231 4 438 49 2 31 174 SREBF1,MIR33B,SMCR5
SE_01_006200197 chr17:40310583-40322967 12384 197 3 247 12 0 204 177 RARA,CDC6,GJD3
SE_01_006200009 chr17:40480683-40542823 62140 9 11 1787 84 7 198 970 TNS4,CCR7,IGFBP4
SE_01_006200171 chr17:4847405-4859576 12171 171 7 311 33 0 17 75 MINK1,PLD2,CHRNE,C17ORF107
SE_01_006200023 chr17:50046784-50066023 19239 23 3 534 50 5 158 1094 ITGA3,PDK2
SE_01_006200243 chr17:57867610-57893751 26141 243 5 749 55 6 160 818 CUEDC1,MRPS23
SE_01_006200051 chr17:59829405-59854216 24811 51 6 557 47 1 99 260 MIR21,TMEM49,RPS6KB1,TUBD1
SE_01_006200039 chr17:75679117-75701672 22555 39 6 598 27 4 46 355 SAP30BP,RECQL5,LOC643008,LOC100130933,ITGB4
SE_01_006200048 chr17:82205205-82247854 42649 48 6 1533 147 2 99 2481 SLC16A3,CCDC57,CSNK1D
SE_01_006200102 chr17:82282036-82299329 17293 102 4 559 52 2 10 449 CD7,CSNK1D,SECTM1,SLC16A3
SE_01_006200215 chr17:903542-929074 25532 215 6 1017 78 3 38 0 NXN
SE_01_006200071 chr18:13672944-13676506 3562 71 1 64 11 0 0 0 C18ORF19
SE_01_006200052 chr19:12777403-12794427 17024 52 6 384 32 0 305 517 JUNB,ASNA1,HOOK2,RNASEH2A,PRDX2,RTBDN,C19ORF43,MAST1,BEST2
SE_01_006200173 chr19:13151841-13167759 15918 173 4 423 32 1 99 519 IER2,TRMT1,NACC1,LYL1,STX10
SE_01_006200040 chr19:13837126-13859402 22276 40 5 627 42 1 177 0 MIR181C,ZSWIM4,MIR27A,MIR24-2,MIR23A,MIR181D,CC2D1A,NANOS3,C19ORF57,LOC284454
SE_01_006200253 chr19:23547253-23555921 8668 253 2 387 37 1 0 0 ZNF675
SE_01_006200114 chr19:37977826-38004899 27073 114 6 728 75 6 84 0 SIPA1L3
SE_01_006200169 chr19:38648272-38666937 18665 169 4 516 53 1 105 0 ACTN4,EIF3K,MAP4K1
SE_01_006200140 chr19:38682548-38698663 16115 140 3 455 70 4 57 0 ACTN4,CAPN12
SE_01_006200149 chr2:110100485-110107979 7494 149 3 199 17 0 14 0 MALL,MIR4267
SE_01_006200116 chr2:111489763-111504381 14618 116 4 285 25 0 29 376 LOC541471
SE_01_006200223 chr2:112783180-112812230 29050 223 5 710 67 5 67 195 IL1A,IL1B,CKAP2L
SE_01_006200210 chr2:113650493-113654006 3513 210 2 79 6 0 0 0 RABL2A,DDX11L2,RPL23AP7
SE_01_006200226 chr2:121500431-121506639 6208 226 2 166 9 0 12 85 CLASP1,RNU4ATAC
SE_01_006200062 chr2:160204749-160242792 38043 62 9 1053 83 4 89 83 ITGB6
SE_01_006200220 chr2:172247373-172262284 14911 220 3 398 22 2 69 0 DLX2
SE_01_006200064 chr2:20211836-20237388 25552 64 9 793 56 0 130 407 SDC1
SE_01_006200098 chr2:234240589-234259555 18966 98 6 519 6 0 20 0 SPP2,ARL4C
SE_01_006200148 chr2:28377521-28409803 32282 148 4 848 41 4 130 1125 FOSL2
SE_01_006200120 chr2:43073387-43088367 14980 120 3 554 20 4 72 0 ZFP36L2
SE_01_006200079 chr2:43219337-43229744 10407 79 3 355 18 0 187 1185 ZFP36L2,LOC100129726
SE_01_006200175 chr2:84897630-84926261 28631 175 5 766 66 0 48 330 TMSB10,C2ORF89,KCMF1
SE_01_006200141 chr2:85255374-85289852 34478 141 6 1019 89 4 124 67 TCF7L1,TGOLN2
SE_01_006200138 chr2:87446198-87460755 14557 138 4 289 23 0 32 82 NCRNA00152
SE_01_006200066 chr20:19973843-19995280 21437 66 3 672 64 2 148 404 RIN2,NAA20
SE_01_006200195 chr20:22374397-22391282 16885 195 7 515 20 2 1 0 LOC284788,FOXA2
SE_01_006200092 chr20:22761476-22777096 15620 92 2 549 10 0 33 0 FOXA2
SE_01_006200154 chr20:31559496-31574389 14893 154 3 410 34 2 79 800 HM13,PSIMCT-1,ID1,MIR3193
SE_01_006200005 chr20:31694954-31724350 29396 5 7 676 50 3 209 385 BCL2L1,TPX2
SE_01_006200182 chr20:35262867-35280679 17812 182 2 519 59 5 0 1757 EIF6,MMP24,FAM83C
SE_01_006200006 chr20:35301568-35321198 19630 6 3 428 40 12 0 820 UQCC,EIF6,FAM83C
SE_01_006200022 chr20:35870348-35885656 15308 22 3 344 38 3 12 98 PHF20,SCAND1
SE_01_006200146 chr20:37293481-37297299 3818 146 1 100 2 0 6 21 MANBAL,SRC,GHRH
SE_01_006200239 chr20:37355729-37360069 4340 239 1 132 7 0 6 0 SRC
SE_01_006200183 chr20:37523546-37528228 4682 183 1 117 11 0 41 330 NNAT,BLCAP
SE_01_006200007 chr20:38108899-38187945 79046 7 10 2386 202 4 165 2241 TGM2
SE_01_006200061 chr20:41001558-41018771 17213 61 3 404 39 0 63 64 TOP1
SE_01_006200090 chr20:41246944-41251073 4129 90 1 108 7 0 31 0 ZHX3
SE_01_006200206 chr20:44493945-44498166 4221 206 1 86 9 3 7 133 SERINC3,TTPAL,PKIG
SE_01_006200015 chr20:45335711-45360621 24910 15 3 677 74 4 175 221 SDC4,SYS1,SYS1-DBNDD2,RBPJL,DBNDD2,MATN4,TP53TG5
SE_01_006200134 chr20:47123736-47137882 14146 134 3 390 15 2 25 0 EYA2,MIR3616,LOC100131496
SE_01_006200008 chr20:47305789-47336049 30260 8 4 879 3 0 44 505 ZMYND8,LOC100131496
SE_01_006200013 chr20:47351224-47361849 10625 13 2 245 2 4 119 615 ZMYND8,LOC100131496
SE_01_006200246 chr20:47789495-47796169 6674 246 2 209 12 4 21 0 SULF2
SE_01_006200110 chr20:47921394-47930577 9183 110 2 239 12 0 0 0 SULF2
SE_01_006200081 chr20:50143412-50173090 29678 81 6 819 129 2 12 329 TMEM189,TMEM189-UBE2V1,UBE2V1,CEBPB
SE_01_006200014 chr20:50415093-50442082 26989 14 4 769 41 2 24 0 PTPN1
SE_01_006200194 chr20:50491962-50498968 7006 194 2 190 15 0 4 0 PTPN1
SE_01_006200135 chr20:51327635-51351782 24147 135 5 788 2 0 12 0 MIR3194,NFATC2
SE_01_006200143 chr20:52484006-52495415 11409 143 4 305 6 0 37 0 ZFP64
SE_01_006200073 chr20:53579034-53597221 18187 73 4 440 5 1 120 449 ZNF217
SE_01_006200219 chr20:53772724-53775846 3122 219 1 95 1 0 0 0 SUMO1P1,ZNF217
SE_01_006200161 chr20:53827487-53830974 3487 161 1 94 2 1 0 0 SUMO1P1,ZNF217
SE_01_006200020 chr20:54114970-54142483 27513 20 5 825 8 4 21 0 BCAS1,CYP24A1
SE_01_006200002 chr20:57685921-57717716 31795 2 4 912 23 0 103 885 PMEPA1
SE_01_006200244 chr20:59826306-59836961 10655 244 3 373 7 0 14 127 PHACTR3,SYCP2
SE_01_006200177 chr20:61184799-61188600 3801 177 1 133 0 0 0 0 CDH4
SE_01_006200003 chr20:62349818-62381667 31849 3 4 1259 119 0 165 779 LAMA5,RPS21,C20ORF151,ADRM1,CABLES2
SE_01_006200091 chr21:43493915-43522728 28813 91 8 841 47 9 21 0 C21ORF125,C21ORF84
SE_01_006200251 chr21:43585259-43602216 16957 251 2 378 47 1 22 49 HSF2BP
SE_01_006200213 chr21:43711518-43729681 18163 213 4 560 64 0 19 308 PDXK,CSTB
SE_01_006200188 chr22:24952912-24992621 39709 188 6 1083 50 1 47 0 KIAA1671,TMEM211
SE_01_006200103 chr22:36324499-36336387 11888 103 4 356 11 3 55 490 MYH9
SE_01_006200065 chr22:36351633-36396653 45020 65 9 1290 115 2 141 252 MYH9
SE_01_006200105 chr22:38218658-38241617 22959 105 4 740 41 1 76 1784 TMEM184B,MAFF,PLA2G6
SE_01_006200196 chr22:38298860-38317357 18497 196 3 584 25 1 92 725 CSNK1E,TMEM184B
SE_01_006200107 chr22:40484850-40513815 28965 107 6 663 55 1 64 0 MKL1,SGSM3
SE_01_006200029 chr22:46054942-46089113 34171 29 11 1002 46 3 232 555 LOC400931,LOC150381,C22ORF26,MIRLET7A3,MIR3619,LOC100271722,MIRLET7B,LOC730668
SE_01_006200164 chr22:50282888-50307797 24909 164 4 882 72 1 171 1891 PLXNB2,FAM116B,TUBGCP6,MAPK12,HDAC10,MAPK11,PPP6R2
SE_01_006200128 chr3:120135396-120178603 43207 128 6 1145 84 27 104 671 GPR156,GSK3B
SE_01_006200179 chr3:134325516-134332923 7407 179 3 201 12 0 30 0 AMOTL2
SE_01_006200181 chr3:151304280-151320912 16632 181 3 446 57 0 29 70 MED12L,GPR87,P2RY13,P2RY14,P2RY12
SE_01_006200203 chr3:185716231-185733990 17759 203 5 471 15 1 4 605 IGF2BP2,C3ORF65
SE_01_006200257 chr3:30341699-30358344 16645 257 6 464 15 3 48 0 TGFBR2
SE_01_006200157 chr3:45122345-45141020 18675 157 4 535 38 0 23 0 CDCP1
SE_01_006200106 chr3:4977394-4996502 19108 106 3 525 23 4 264 671 BHLHE40
SE_01_006200111 chr3:50151129-50167506 16377 111 6 361 38 1 238 532 SEMA3F,GNAT1,SLC38A3
SE_01_006200085 chr3:52044900-52055714 10814 85 4 272 11 0 97 1109 DUSP7,C3ORF74,RPL29
SE_01_006200162 chr3:57970059-57984710 14651 162 6 434 35 0 12 0 FLNB
SE_01_006200236 chr4:15894193-15921600 27407 236 4 862 44 3 7 0 FGFBP1,FGFBP2
SE_01_006200046 chr4:74407799-74440498 32699 46 8 237 90 2 92 0 AREG,EREG
SE_01_006200147 chr4:88599569-88623574 24005 147 4 624 41 10 36 84 HERC3
SE_01_006200001 chr5:1315732-1331438 15706 1 2 589 29 12 24 901 CLPTM1L,TERT
SE_01_006200089 chr5:134502782-134527774 24992 89 3 593 56 5 313 814 PHF15
SE_01_006200024 chr5:135993384-136037929 44545 24 9 1246 55 11 156 246 TGFBI,VTRNA2,LECT2
SE_01_006200174 chr5:14184227-14191710 7483 174 2 221 10 0 15 0 TRIO
SE_01_006200158 chr5:143234740-143246425 11685 158 2 297 7 1 27 0 NR3C1
SE_01_006200094 chr5:148964687-148987795 23108 94 4 622 58 1 71 487 SH3TC2
SE_01_006200229 chr5:150472398-150498834 26436 229 5 726 56 0 121 108 NDST1,RPS14
SE_01_006200150 chr5:172765834-172778725 12891 150 3 401 28 1 135 574 DUSP1
SE_01_006200100 chr5:172859523-172872133 12610 100 2 390 13 2 10 875 ERGIC1
SE_01_006200170 chr5:172897470-172906012 8542 170 3 274 9 1 43 111 ERGIC1,LOC100268168
SE_01_006200156 chr5:251195-263735 12540 156 2 303 80 1 8 284 SDHA,CCDC127,AHRR,PDCD6
SE_01_006200049 chr5:53321638-53344406 22768 49 4 612 27 3 123 0 FST
SE_01_006200247 chr5:53359388-53364229 4841 247 1 137 14 1 32 0 FST
SE_01_006200193 chr5:57823409-57842934 19525 193 3 510 10 2 45 0 ACTBL2
SE_01_006200072 chr5:65190580-65210328 19748 72 4 495 18 0 80 47 ADAMTS6
SE_01_006200087 chr5:67247951-67270061 22110 87 3 622 5 0 76 0 CD180
SE_01_006200077 chr5:73636778-73656017 19239 77 3 450 28 0 52 0 RGNEF
SE_01_006200211 chr5:74631133-74643689 12556 211 3 292 31 0 155 718 ENC1,HEXB
SE_01_006200131 chr6:105591202-105601766 10564 131 2 249 4 2 43 0 PREP
SE_01_006200232 chr6:117439489-117450064 10575 232 3 355 60 2 5 0 ROS1,DCBLD1
SE_01_006200180 chr6:11765384-11772883 7499 180 3 226 11 2 16 161 C6ORF105
SE_01_006200192 chr6:150254794-150273787 18993 192 5 534 44 3 24 0 IYD,PPP1R14C
SE_01_006200255 chr6:35726231-35733410 7179 255 2 209 11 0 99 616 FKBP5,LOC285847,C6ORF126,C6ORF81,C6ORF127
SE_01_006200043 chr6:44033341-44073469 40128 43 5 1114 68 6 171 0 C6ORF223
SE_01_006200028 chr7:130886371-130918198 31827 28 8 998 59 4 101 118 LOC646329,MIR29A,MIR29B1
SE_01_006200113 chr7:43635139-43659396 24257 113 4 635 103 0 0 368 C7ORF44,STK17A
SE_01_006200190 chr7:5418801-5429891 11090 190 4 332 3 0 243 846 TNRC18
SE_01_006200209 chr7:55051460-55074667 23207 209 4 689 44 5 75 0 EGFR
SE_01_006200205 chr8:102745483-102771449 25966 205 5 715 15 1 31 0 KLF10
SE_01_006200069 chr8:127205440-127226284 20844 69 6 586 5 1 105 360 POU5F1B,LOC727677
SE_01_006200201 chr8:127390051-127401844 11793 201 4 327 18 5 71 0 POU5F1B,LOC727677
SE_01_006200159 chr8:127734010-127743672 9662 159 2 268 2 0 96 684 MYC
SE_01_006200058 chr8:143935519-143957294 21775 58 5 721 64 1 209 1757 PLEC,MIR661,GRINA,PARP10
SE_01_006200208 chr8:38925201-38939084 13883 208 3 393 18 0 0 51 PLEKHA2,HTRA4
SE_01_006200198 chr8:66521305-66536796 15491 198 2 451 18 0 37 0 C8ORF46,MYBL1
SE_01_006200086 chr9:127545157-127575049 29892 86 6 837 120 3 110 220 FAM129B,STXBP1
SE_01_006200152 chr9:128890224-128914133 23909 152 4 646 52 1 135 427 LRRC8A,PHYHD1,CCBL1,NUP188,DOLK
SE_01_006200082 chr9:21549857-21591897 42040 82 9 1201 18 7 104 166 LOC554202,MIR31
SE_01_006200070 chr9:21674975-21689914 14939 70 8 576 39 10 65 0 MTAP
SE_01_006200230 chr9:33158677-33166263 7586 230 3 164 17 0 48 0 B4GALT1
SE_01_006200202 chr9:35510100-35520231 10131 202 3 202 17 1 0 0 RUSC2,FAM166B
SE_01_006200121 chr9:37937390-37975607 38217 121 7 1123 102 4 100 304 SHB,MCART1
SE_01_006200145 chr9:38005856-38028248 22392 145 5 666 60 7 80 93 SHB
SE_01_006200126 chr9:673793-698391 24598 126 5 986 128 7 60 219 KANK1

SE annotation visualization


Information description of sample and annotation

Case ID: Name:ENCSR987PNT
Input ID: Name:ENCSR394DWD
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb