Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000119927
Gene: GPAM Gene type: protein_coding
Strand: - External links:
Genomic region: chr10:112149865-112215377 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_154300291 chr10:111745129-111765042 Sample_02_1543 Gastrointestinal Stromal GIST-48 291 7 612 11 4 41 0 GPAM
SE_02_152200035 chr10:111746999-111786523 Sample_02_1522 Skin A375 RTKi 35 6 1206 41 7 75 0 GPAM
SE_02_018000234 chr10:111754076-111777035 Sample_02_0180 melanoma CJM 234 5 690 29 5 53 0 GPAM
SE_02_152100640 chr10:111754622-111767837 Sample_02_1521 Skin A375 DMSO 640 4 417 14 3 34 0 GPAM
SE_02_097300442 chr10:111754945-111767998 Sample_02_0973 Brain H3.3K27M-KO_BT245-c4p6-Rx_R2_cells 442 2 409 14 2 34 0 GPAM
SE_02_018100474 chr10:111755064-111768186 Sample_02_0181 melanoma COLO679 474 2 409 14 2 34 0 GPAM
SE_02_057201134 chr10:111755203-111767938 Sample_02_0572 Brain LN229_1_mM_glucose 1134 5 396 14 2 34 0 GPAM
SE_02_098000331 chr10:111755806-111767577 Sample_02_0980 Brain BT245 331 6 368 11 2 34 0 GPAM
SE_02_155100618 chr10:111756680-111777216 Sample_02_1551 Gastrointestinal Stromal MaMel 618 7 614 27 4 53 0 GPAM
SE_02_075200998 chr10:111800751-111808425 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 998 2 235 5 1 20 0 GPAM
SE_02_154300090 chr10:111820247-111837899 Sample_02_1543 Gastrointestinal Stromal GIST-48 90 5 545 11 0 45 0 GPAM
SE_02_028100345 chr10:111870887-111887219 Sample_02_0281 Bone U2OS 345 1 533 17 0 40 0 GPAM
SE_02_113600904 chr10:111871481-111885026 Sample_02_1136 Bone U2OS-anaphase/telophase 904 7 439 11 0 37 0 GPAM
SE_02_140800347 chr10:111914935-111927634 Sample_02_1408 Prostate LNCaP_EtOH_vehicle_4h_MED19_OE 347 4 358 12 0 30 0 GPAM
SE_02_108400515 chr10:111920893-111927278 Sample_02_1084 Blood KBM7-derived near haploid cells 515 4 169 4 0 25 0 GPAM
SE_02_075500161 chr10:111981557-112002943 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 161 11 650 3 0 33 0 GPAM
SE_02_075200138 chr10:111982525-112004822 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 138 6 658 3 0 35 0 GPAM
SE_02_004300232 chr10:111983106-112002768 Sample_02_0043 Embryo endodermal CyT49_ES_D2 232 6 583 3 0 33 0 GPAM
SE_02_003800193 chr10:111983143-112001091 Sample_02_0038 Embryo DE 193 3 536 3 0 29 0 GPAM
SE_00_002400783 chr10:111983678-112002919 Sample_00_0024 Embryo mesendoderm 783 4 571 2 0 31 0 GPAM
SE_02_067201032 chr10:111993046-112004856 Sample_02_0672 Endometrium endometrium cancer_DSG 1032 3 359 1 0 16 0 GPAM
SE_02_067400948 chr10:111995392-112004396 Sample_02_0674 Endometrium E1_FA 948 5 262 0 0 9 0 GPAM
SE_02_154300313 chr10:112075309-112092874 Sample_02_1543 Gastrointestinal Stromal GIST-48 313 9 518 3 1 57 0 GPAM
SE_00_002000748 chr10:112146811-112192350 Sample_00_0020 Large intestine large-intestine_108d 748 7 1233 90 9 133 1436 GPAM
SE_00_003601152 chr10:112147078-112192227 Sample_00_0036 Small intestine small-intestine_108days 1152 6 1219 90 9 133 1436 GPAM
SE_02_032700095 chr10:112158366-112229382 Sample_02_0327 Liver hepatocytes_d6 95 14 1846 100 7 178 739 GPAM
SE_01_008200447 chr10:112159243-112229294 Sample_01_0082 Right lobe of liver right-lobe-of-liver 447 13 1817 98 7 177 719 GPAM
SE_02_046600371 chr10:112160981-112244730 Sample_02_0466 Adipose visceral adipocytes 371 40 2244 145 6 166 599 GPAM,TECTB
SE_02_157100061 chr10:112172483-112281693 Sample_02_1571 Fibroblast Fibroblast cells 61 25 3028 231 5 184 360 GPAM,MIR6715B,TECTB,MIR6715A
SE_02_131100567 chr10:112172560-112244833 Sample_02_1311 Bone marrow HDMSCs 567 10 1943 124 3 144 360 GPAM,TECTB
SE_02_093800038 chr10:112173679-112281334 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 38 20 2980 226 5 177 321 GPAM,MIR6715B,TECTB,MIR6715A
SE_02_093700260 chr10:112176720-112233298 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 260 12 1451 71 2 133 247 GPAM
SE_02_031200491 chr10:112182132-112233338 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 491 5 1306 63 2 111 161 GPAM
SE_02_137900100 chr10:112189695-112231761 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 100 29 1073 43 2 85 0 GPAM
SE_02_029700599 chr10:112198456-112228174 Sample_02_0297 Neuroblastoma CLB-CAR 599 4 738 24 2 66 0 GPAM
SE_02_031900629 chr10:112198550-112233055 Sample_02_0319 Neuroblastoma NB-EBc1 629 6 875 40 2 68 0 GPAM
SE_02_110400498 chr10:112198706-112232981 Sample_02_1104 Brain NB-69 498 7 868 40 2 68 0 GPAM
SE_02_010700376 chr10:112200549-112233233 Sample_02_0107 Endometrium EEC16 376 2 827 42 2 68 0 GPAM
SE_01_004000187 chr10:112201052-112234947 Sample_01_0040 Haematopoietic and lymphoid tissue Karpas-422 187 3 865 50 2 58 0 TECTB,GPAM
SE_02_018200068 chr10:112201105-112233116 Sample_02_0182 melanoma LOX-IMVI 68 5 818 42 2 56 0 GPAM
SE_02_011700189 chr10:112201372-112234841 Sample_02_0117 Haematopoietic and lymphoid tissue KARPAS-422 189 3 853 50 2 55 0 TECTB,GPAM
SE_02_093600169 chr10:112201933-112251396 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 169 19 1377 99 2 50 0 MIR6715B,TECTB,MIR6715A,GPAM
SE_02_026400856 chr10:112202423-112245565 Sample_02_0264 Skeletal muscle 7250-empty 856 8 1174 86 2 47 0 TECTB,GPAM
SE_02_034100430 chr10:112202621-112216958 Sample_02_0341 Autonomic ganglia SH-SY5Y_untreat 430 2 326 3 0 19 0 GPAM
SE_02_106500405 chr10:112202662-112234630 Sample_02_1065 Lymphoma KARPAS-422_DMSO_8d 405 7 806 49 2 47 0 TECTB,GPAM
SE_02_137400680 chr10:112202875-112244780 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 680 27 1138 85 2 47 0 TECTB,GPAM
SE_02_141800658 chr10:112202957-112231148 Sample_02_1418 Brain SF9427 658 12 705 30 2 47 0 GPAM
SE_02_029600525 chr10:112206948-112217429 Sample_02_0296 Neuroblastoma CLB-BER-Lud 525 1 282 4 0 19 0 GPAM
SE_02_032500396 chr10:112207037-112229192 Sample_02_0325 Liver hepatocytes_d1 396 4 602 28 2 45 0 GPAM
SE_02_046500323 chr10:112207240-112215375 Sample_02_0465 Adipose subcutaneous adipocytes 323 1 228 2 0 14 0 GPAM
SE_00_001400529 chr10:112207294-112229229 Sample_00_0014 Heart left ventricle heart-left-ventricle 529 3 599 28 2 45 0 GPAM
SE_02_042100483 chr10:112207454-112216761 Sample_02_0421 Brain BE2C_3 483 2 252 3 0 19 0 GPAM
SE_02_033900202 chr10:112207535-112216746 Sample_02_0339 Neuroblastoma NGP 202 2 251 3 0 19 0 GPAM
SE_02_022000194 chr10:112207857-112216773 Sample_02_0220 Brain BE2C_1 194 4 242 3 0 18 0 GPAM
SE_02_031300474 chr10:112208051-112217040 Sample_02_0313 Neuroblastoma SK-N-DZ 474 2 244 1 0 17 0 GPAM
SE_02_150000678 chr10:112208151-112216774 Sample_02_1500 Brain KELLY_untreat 678 4 233 1 0 17 0 GPAM
SE_02_006100030 chr10:112210185-112216333 Sample_02_0061 Adipose hMADS-3_white 30 2 162 1 0 11 0 GPAM
SE_02_006200048 chr10:112210575-112228331 Sample_02_0062 Adipose hMADS-3_brite 48 3 479 23 2 36 0 GPAM
SE_02_032600298 chr10:112210738-112229287 Sample_02_0326 Liver hepatocytes_d3 298 4 501 27 2 36 0 GPAM
SE_02_028600698 chr10:112210866-112229221 Sample_02_0286 Liver HuH7_IL-1alpha_1h 698 2 496 26 2 35 0 GPAM
SE_02_076300217 chr10:112219182-112237454 Sample_02_0763 Podocyte podocyte_DEX 217 1 497 49 2 26 0 TECTB,GPAM
SE_02_011100552 chr10:112220630-112232905 Sample_02_0111 Ovaries IOE4 552 1 327 29 1 24 0 GPAM
SE_02_028000573 chr10:112220726-112233070 Sample_02_0280 Mammary gland SUM159_DMSO_24h 573 1 327 28 1 24 0 GPAM
SE_02_032600965 chr10:112242388-112281291 Sample_02_0326 Liver hepatocytes_d3 965 8 1154 113 2 39 0 TECTB,GPAM

Genomic distribution of SEs associated with GPAM

The strength of the tissue affected by the gene


Expression of GPAM