SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000118004
Gene: COLEC11 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:3594832-3644644 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_110700070 chr2:3560240-3611370 Sample_02_1107 Brain SK-N-AS 70 14 1629 219 1 64 1219 RNASEH1-AS1,COLEC11,RPS7,RNASEH1,ADI1,ALLC
SE_02_031200252 chr2:3567490-3634812 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 252 6 2322 253 2 73 1384 RPS7,COLEC11,ALLC,RNASEH1
SE_02_155600042 chr2:3569118-3610896 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 42 13 1322 151 1 59 1132 COLEC11,RPS7,RNASEH1-AS1,ALLC,ADI1,RNASEH1
SE_02_110600380 chr2:3569226-3616622 Sample_02_1106 Brain NGP 380 14 1610 193 1 66 1248 COLEC11,RPS7,RNASEH1-AS1,ALLC,ADI1,RNASEH1
SE_02_110800186 chr2:3569358-3611438 Sample_02_1108 Brain SK-N-BE_2_-C 186 13 1345 158 1 62 1132 COLEC11,RPS7,RNASEH1-AS1,ALLC,ADI1,RNASEH1
SE_02_054000153 chr2:3569426-3609736 Sample_02_0540 Brain SK-N-BE_2_-C_PI3K_engineered 153 11 1255 131 1 52 1132 COLEC11,RPS7,RNASEH1-AS1,ALLC,ADI1,RNASEH1
SE_02_034100037 chr2:3569885-3635972 Sample_02_0341 Autonomic ganglia SH-SY5Y_untreat 37 6 2308 246 2 72 1384 RPS7,COLEC11,ALLC,RNASEH1
SE_02_029700337 chr2:3569918-3619693 Sample_02_0297 Neuroblastoma CLB-CAR 337 7 1706 203 1 66 1318 RPS7,COLEC11,ALLC,RNASEH1
SE_02_124600125 chr2:3571659-3610826 Sample_02_1246 Brain LAN5_ATRA 125 15 1245 140 1 56 1132 COLEC11,RPS7,RNASEH1-AS1,RNASEH1,ALLC
SE_02_030400392 chr2:3574425-3609700 Sample_02_0304 Neuroblastoma N206 392 6 1112 113 1 52 1132 RPS7,COLEC11,ALLC,RNASEH1
SE_02_031100246 chr2:3574452-3609474 Sample_02_0311 Neuroblastoma SK-N-AS 246 4 1106 112 1 52 1132 RPS7,COLEC11,ALLC,RNASEH1
SE_02_030600144 chr2:3574502-3619912 Sample_02_0306 Autonomic ganglia SH-SY5Y 144 5 1587 188 1 66 1318 RPS7,COLEC11,ALLC,RNASEH1
SE_02_110400070 chr2:3574629-3619504 Sample_02_1104 Brain NB-69 70 19 1571 187 1 66 1318 COLEC11,RPS7,RNASEH1-AS1,RNASEH1,ALLC
SE_02_063200248 chr2:3575293-3609193 Sample_02_0632 Gastrointestinal Stromal GIST-48B_DMSO 248 8 1061 108 1 52 1087 COLEC11,RPS7,RNASEH1-AS1,RNASEH1,ALLC
SE_02_122901356 chr2:3575333-3605288 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1356 11 926 91 1 51 961 COLEC11,RPS7,RNASEH1-AS1,RNASEH1
SE_02_156400058 chr2:3575491-3604200 Sample_02_1564 Gastrointestinal Stromal GIST-430 58 13 880 90 1 43 829 COLEC11,RPS7,RNASEH1-AS1,RNASEH1
SE_02_063300271 chr2:3576913-3609172 Sample_02_0633 Gastrointestinal Stromal GIST-48B_Imatinib 271 7 998 104 1 40 853 COLEC11,RPS7,RNASEH1-AS1,RNASEH1,ALLC
SE_02_154900299 chr2:3577008-3605200 Sample_02_1549 Gastrointestinal Stromal GIST-430B 299 7 861 87 1 40 729 COLEC11,RPS7,RNASEH1-AS1,RNASEH1
SE_02_155700228 chr2:3577049-3604290 Sample_02_1557 Gastrointestinal Stromal GIST-6_KIT e11/16 228 5 826 85 1 32 651 COLEC11,RPS7,RNASEH1-AS1,RNASEH1
SE_02_041200350 chr2:3577205-3607206 Sample_02_0412 Liver TTC549_Doxycycline 350 5 912 89 1 40 843 RPS7,COLEC11,RNASEH1
SE_02_063400215 chr2:3577266-3609283 Sample_02_0634 Gastrointestinal Stromal GIST-48B_JQ1 215 7 990 101 1 40 843 COLEC11,RPS7,RNASEH1-AS1,RNASEH1,ALLC
SE_02_154600137 chr2:3577369-3597782 Sample_02_1546 Gastrointestinal Stromal GIST-430/654 137 7 574 61 0 31 420 COLEC11,RPS7,RNASEH1-AS1,RNASEH1
SE_01_011100217 chr2:3577796-3619201 Sample_01_0111 Brain SK-N-SH 217 11 1430 174 1 54 1011 COLEC11,RPS7,RNASEH1-AS1,RNASEH1,ALLC
SE_02_031900387 chr2:3583135-3619391 Sample_02_0319 Neuroblastoma NB-EBc1 387 5 1275 159 1 40 743 COLEC11,RPS7,ALLC,RNASEH1
SE_02_025100129 chr2:3583268-3619116 Sample_02_0251 Autonomic ganglia SH-SY5Y-MYCN-OFF 129 5 1259 157 1 40 743 COLEC11,RPS7,ALLC,RNASEH1
SE_02_030000376 chr2:3583353-3620215 Sample_02_0300 Neuroblastoma CLB-PE 376 4 1295 157 1 40 743 COLEC11,RPS7,ALLC,RNASEH1
SE_02_030800185 chr2:3583403-3606854 Sample_02_0308 Neuroblastoma SJNB1 185 5 700 64 1 26 557 COLEC11,RPS7,RNASEH1
SE_02_042100178 chr2:3583409-3611425 Sample_02_0421 Brain BE2C_3 178 5 888 108 1 36 557 COLEC11,RPS7,ALLC,RNASEH1
SE_02_025300216 chr2:3583632-3611150 Sample_02_0253 Brain BE2C_DMSO 216 3 869 104 1 35 557 COLEC11,RPS7,ALLC,RNASEH1
SE_02_150000480 chr2:3583783-3618599 Sample_02_1500 Brain KELLY_untreat 480 7 1231 153 1 40 743 COLEC11,RNASEH1-AS1,RNASEH1,ALLC,RPS7
SE_02_110500412 chr2:3584135-3613236 Sample_02_1105 Brain NBL-S 412 11 964 118 1 36 589 COLEC11,RNASEH1-AS1,RNASEH1,ALLC,RPS7
SE_00_002900057 chr2:3584210-3660089 Sample_00_0029 Ovary ovary 57 31 2777 247 8 91 1403 COLEC11,ALLC,RPS7,RNASEH1,DCDC2C
SE_02_110000100 chr2:3584345-3661431 Sample_02_1100 Brain COG-N-415 100 31 2812 247 8 91 1403 ALLC,COLEC11,RNASEH1-AS1,DCDC2C,RNASEH1,RPS7
SE_02_110900493 chr2:3585368-3612853 Sample_02_1109 Brain SK-N-FI 493 7 902 108 1 36 557 COLEC11,RNASEH1-AS1,RNASEH1,ALLC,RPS7
SE_02_104600414 chr2:3585408-3677815 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 414 31 3339 276 11 95 1496 ALLC,COLEC11,RNASEH1-AS1,DCDC2C,RNASEH1,RPS7
SE_02_123500298 chr2:3590817-3610782 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 298 6 626 74 1 27 557 COLEC11,RNASEH1-AS1,RNASEH1,ALLC,RPS7
SE_02_051600550 chr2:3591701-3662454 Sample_02_0516 Esophagus KYSE70 550 15 2638 227 8 89 1403 ALLC,COLEC11,RNASEH1-AS1,DCDC2C,RNASEH1,RPS7
SE_02_050500561 chr2:3591772-3662454 Sample_02_0505 Esophagus KYSE70_1 561 15 2638 227 8 89 1403 ALLC,COLEC11,RNASEH1-AS1,DCDC2C,RNASEH1,RPS7
SE_02_031500238 chr2:3593654-3609607 Sample_02_0315 Neuroblastoma TR14 238 4 526 51 1 24 557 COLEC11,RPS7,ALLC,RNASEH1
SE_02_034000368 chr2:3601659-3609605 Sample_02_0340 Brain BE2C_2 368 1 304 27 0 9 423 COLEC11,RPS7,ALLC,RNASEH1
SE_02_124400240 chr2:3603199-3613548 Sample_02_1244 Brain KCNR_ATRA 240 3 434 68 0 22 437 COLEC11,RNASEH1-AS1,RNASEH1,ALLC,RPS7
SE_02_021601381 chr2:3641813-3671251 Sample_02_0216 Skin NHEK_scramble 1381 4 1078 60 8 33 402 COLEC11,ALLC
Genomic distribution of SEs associated with COLEC11
Genome Browser

The strength of the tissue affected by the gene

Expression of COLEC11

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)