SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000163359
Gene: COL6A3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr2:237324003-237414207 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_119900001 chr2:237117355-237476528 Sample_02_1199 Brain GBM35 1 113 10936 579 27 709 3921 COL6A3,COPS8,MLPH,MIR6811
SE_02_046600002 chr2:237117422-237450139 Sample_02_0466 Adipose visceral adipocytes 2 237 10144 485 22 654 3921 COL6A3,COPS8,MLPH,ACKR3
SE_02_142700001 chr2:237117451-237460831 Sample_02_1427 Shoulder fibroblast_343 1 113 10488 527 25 687 3921 COL6A3,COPS8,MLPH
SE_01_001800002 chr2:237117462-237442650 Sample_01_0018 Submandibular Salivary Gland ACC112 2 47 9878 452 20 654 3921 COL6A3,MLPH,COPS8
SE_02_017200001 chr2:237118279-237484093 Sample_02_0172 Lung IMR-90_quiescent 1 49 11133 616 28 711 3921 COL6A3,MLPH,COPS8
SE_02_056900002 chr2:237118918-237442021 Sample_02_0569 Periodontal ligament mesenchymal stem cell 2 159 9825 451 20 654 3921 COL6A3,COPS8,MLPH
SE_02_142800001 chr2:237120638-237483950 Sample_02_1428 Shoulder fibroblast_316 1 112 11069 611 28 711 3921 COL6A3,COPS8,MLPH,MIR6811
SE_02_017100001 chr2:237122116-237514017 Sample_02_0171 Lung IMR-90_proliferating 1 48 12079 726 29 737 4460 COL6A3,MLPH,COPS8
SE_02_144500005 chr2:237122483-237378863 Sample_02_1445 Adipose SW872_TAZ4SA 5 59 7903 376 17 464 3327 COL6A3,COPS8
SE_02_143600002 chr2:237126636-237509012 Sample_02_1436 Liver LSEC-Ctrl 2 117 11755 710 29 724 4290 MLPH,COL6A3,COPS8,MIR6811
SE_02_024300002 chr2:237140766-237362379 Sample_02_0243 Foreskin foreskin_HFFs 2 28 6745 313 16 375 2300 COL6A3
SE_02_028200001 chr2:237154353-237361906 Sample_02_0282 Lung IMR-90 1 38 6306 248 15 353 2282 COL6A3
SE_02_145400001 chr2:237155592-237363962 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 1 44 6346 244 16 355 2356 COL6A3
SE_02_145100004 chr2:237155753-237361861 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 4 50 6266 244 15 352 2278 COL6A3
SE_02_145200001 chr2:237170614-237361311 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 1 42 5834 205 13 329 2217 COL6A3
SE_02_091300214 chr2:237189604-237328014 Sample_02_0913 Heart left ventricle_DCM_LV1304 214 40 4202 127 7 211 192 COL6A3
SE_01_007300475 chr2:237190755-237327822 Sample_01_0073 Coronary artery coronary-artery 475 22 4160 127 7 206 192 COL6A3
SE_02_047400014 chr2:237196364-237354629 Sample_02_0474 Fibroblast umbilical cord Fibroblast 14 40 4889 143 12 292 1592 COL6A3
SE_02_063700001 chr2:237197766-237361616 Sample_02_0637 Fibroblast fibroblast_WT_GM07492 1 83 5089 147 13 311 2234 COL6A3
SE_02_105600100 chr2:237198915-237316324 Sample_02_1056 Esophagus ChTRT 100 18 3548 112 6 166 0 COL6A3
SE_02_086800022 chr2:237200262-237326883 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 22 72 3839 121 7 193 192 COL6A3
SE_02_046500053 chr2:237201340-237366054 Sample_02_0465 Adipose subcutaneous adipocytes 53 83 5153 147 14 319 2496 COL6A3
SE_02_061400061 chr2:237205681-237327685 Sample_02_0614 Liposarcoma MLPS_T2 61 40 3698 114 6 168 192 COL6A3
SE_02_132800016 chr2:237244502-237326643 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 16 24 2532 56 5 113 192 COL6A3
SE_02_139800076 chr2:237250944-237322509 Sample_02_1398 Bone U2OS_siNC 76 36 2248 46 5 91 0 COL6A3
SE_02_055200013 chr2:237252163-237344589 Sample_02_0552 Other SYO1 shCt 13 37 2906 64 6 164 969 COL6A3
SE_02_050000004 chr2:237252249-237362876 Sample_02_0500 Fetal lung IMR90_#2 4 72 3571 74 12 232 2300 COL6A3,MLPH,AC112721.1,AC112715.2
SE_02_111300020 chr2:237252286-237305752 Sample_02_1113 Bone U2OS 20 13 1678 32 4 78 0 COL6A3
SE_00_001500128 chr2:237252296-237265635 Sample_00_0015 Lung IMR-90 128 1 414 15 0 36 0 COL6A3
SE_02_044300080 chr2:237252327-237340983 Sample_02_0443 Bone MG63 80 56 2787 61 6 150 574 COL6A3
SE_02_007300015 chr2:237252395-237317666 Sample_02_0073 Other 90-8TL_DMSO 15 12 2052 41 4 86 0 COL6A3
SE_02_126300030 chr2:237252657-237323093 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 30 14 2222 45 5 91 0 COL6A3
SE_02_126400111 chr2:237252661-237316474 Sample_02_1264 Bone Im-GCT-4072_G34W KO 111 17 2002 38 4 86 0 COL6A3
SE_02_044800695 chr2:237252733-237265511 Sample_02_0448 Bone MNNG 695 5 401 13 0 36 0 COL6A3
SE_02_044600131 chr2:237252754-237360529 Sample_02_0446 Bone osteosarcoma tumor P2 131 55 3480 73 11 228 2165 COL6A3
SE_02_044400054 chr2:237252795-237362569 Sample_02_0444 Bone osteosarcoma tumor P10 54 50 3545 73 12 232 2300 COL6A3
SE_02_043700227 chr2:237252861-237315415 Sample_02_0437 Bone 143B 227 20 1961 37 4 82 0 COL6A3
SE_02_150600472 chr2:237253001-237265755 Sample_02_1506 Brain SHEP with tetracycline inducible MYC_DOX_6HR 472 6 396 13 0 36 0 COL6A3
SE_02_097200486 chr2:237253195-237327452 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 486 12 2326 46 5 111 192 COL6A3
SE_02_026400058 chr2:237253219-237325332 Sample_02_0264 Skeletal muscle 7250-empty 58 10 2276 45 5 104 144 COL6A3
SE_02_126700011 chr2:237253274-237346754 Sample_02_1267 Bone Im-GCT-4072_G34W 11 18 2959 62 7 179 1138 COL6A3
SE_02_094300037 chr2:237253306-237306904 Sample_02_0943 Brain LNZ308 37 16 1686 30 4 74 0 COL6A3
SE_02_005500009 chr2:237253309-237363231 Sample_02_0055 Lung IMR-90_Nutlin-3a 9 13 3561 72 12 228 2324 COL6A3
SE_02_010700561 chr2:237253361-237317163 Sample_02_0107 Endometrium EEC16 561 6 2006 39 4 82 0 COL6A3
SE_02_011000640 chr2:237253372-237316811 Sample_02_0110 Ovaries IOE11 640 6 1994 38 4 82 0 COL6A3
SE_02_086700053 chr2:237253428-237361542 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 53 64 3488 72 11 224 2225 COL6A3
SE_02_005400009 chr2:237253464-237363152 Sample_02_0054 Lung IMR-90_DMSO_1 9 15 3552 72 12 228 2307 COL6A3
SE_02_126200604 chr2:237253493-237265624 Sample_02_1262 Bone Im-GCT-3504_G34W 604 3 376 13 0 32 0 COL6A3
SE_02_063800172 chr2:237253530-237300002 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 172 21 1423 29 3 73 0 COL6A3
SE_02_079300171 chr2:237253540-237292034 Sample_02_0793 Brain MES20 171 14 1163 29 2 68 0 COL6A3
SE_02_017300079 chr2:237253557-237316748 Sample_02_0173 Lung IMR-90_senescent 79 17 1983 38 4 82 0 COL6A3
SE_02_060600056 chr2:237253557-237327683 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 56 25 2324 47 5 109 192 COL6A3,MLPH,COPS8
SE_02_126100914 chr2:237253572-237265628 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 914 6 374 13 0 32 0 COL6A3
SE_01_006600008 chr2:237253592-237360196 Sample_01_0066 Smooth muscle smooth-muscle-cell 8 21 3435 72 11 224 2137 COL6A3
SE_02_030100111 chr2:237253609-237346881 Sample_02_0301 Neuroblastoma GIMEN 111 14 2947 62 7 179 1141 COL6A3
SE_02_143700016 chr2:237253626-237506933 Sample_02_1437 Liver LSEC-TNF 16 98 7981 411 25 573 4290 MLPH,COL6A3,MIR6811
SE_02_126000807 chr2:237253633-237265775 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 807 3 374 13 0 32 0 COL6A3
SE_02_157100021 chr2:237253633-237352456 Sample_02_1571 Fibroblast Fibroblast cells 21 31 3168 66 10 192 1477 COL6A3
SE_02_126801054 chr2:237253641-237265479 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 1054 3 368 12 0 32 0 COL6A3
SE_02_060500058 chr2:237253689-237327760 Sample_02_0605 Skin Skin Fibroblast_DMSO 58 22 2328 47 5 109 192 COL6A3,MLPH,COPS8
SE_02_083900137 chr2:237253706-237300779 Sample_02_0839 Embryo hNPCs_K755R/+ 137 17 1450 29 3 74 0 COL6A3
SE_02_030500047 chr2:237253793-237316802 Sample_02_0305 Neuroblastoma SH-EP 47 7 1978 37 4 82 0 COL6A3
SE_02_026300102 chr2:237253798-237327746 Sample_02_0263 Osteoblastic hFOB_undifferentiated 102 13 2323 46 5 109 192 COL6A3
SE_02_009100111 chr2:237253811-237264223 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 111 3 325 9 0 24 0 COL6A3
SE_02_137801267 chr2:237253841-237265640 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 1267 4 364 12 0 32 0 COL6A3
SE_02_049900022 chr2:237253842-237361860 Sample_02_0499 Fetal lung IMR90 IR Senescence 22 56 3482 71 11 226 2278 COL6A3,MLPH,AC112721.1,AC112715.2
SE_01_001900901 chr2:237253878-237266003 Sample_01_0019 Brain and spinal cord astrocyte 901 2 367 12 0 32 0 COL6A3
SE_02_008800034 chr2:237253881-237301588 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 34 10 1469 28 3 74 0 COL6A3
SE_02_044500214 chr2:237253911-237356737 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 214 34 3310 70 10 204 1788 COL6A3
SE_02_049700009 chr2:237253915-237295008 Sample_02_0497 Fetal lung IMR90_#1 9 12 1237 28 2 69 0 COL6A3,MLPH,AC112721.1,AC112715.2
SE_02_137701038 chr2:237253920-237265391 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 1038 3 354 11 0 32 0 COL6A3
SE_02_072700005 chr2:237253978-237503933 Sample_02_0727 Fetal lung IMR90_Etoposide 5 77 7859 400 24 573 4290 MLPH,COL6A3,MIR6811,AC112721.1,AC112715.2
SE_02_020900026 chr2:237253998-237361809 Sample_02_0209 Lung MRC-5_MRC5_1DPT 26 27 3478 71 11 226 2271 COL6A3
SE_02_044000051 chr2:237254022-237317448 Sample_02_0440 Bone LM7 51 29 1991 38 4 82 0 COL6A3
SE_02_017500036 chr2:237254072-237327615 Sample_02_0175 Lung IMR-90_Etoposide 36 18 2305 45 5 109 192 COL6A3
SE_02_113300569 chr2:237254190-237265425 Sample_02_1133 Liver Hepatic stellate cells 569 3 349 11 0 31 0 COL6A3
SE_02_045100019 chr2:237254364-237362366 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 19 37 3486 71 12 227 2300 COL6A3
SE_02_027400143 chr2:237254489-237324241 Sample_02_0274 Endometriosis hTERT_KD 143 9 2203 43 5 87 47 COL6A3
SE_02_017400179 chr2:237254495-237258232 Sample_02_0174 Lung IMR-90_DMSO_2 179 3 111 3 0 16 0 COL6A3
SE_02_135500690 chr2:237254525-237265268 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 690 2 337 11 0 30 0 COL6A3
SE_02_135600564 chr2:237254540-237265033 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 564 2 331 11 0 26 0 COL6A3
SE_02_009200179 chr2:237254565-237263783 Sample_02_0092 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_3 179 3 294 9 0 21 0 COL6A3
SE_02_008900244 chr2:237254715-237265358 Sample_02_0089 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3 244 5 337 11 0 30 0 COL6A3
SE_02_049800026 chr2:237254871-237316374 Sample_02_0498 Fetal lung IMR90 Senescent_1 26 38 1934 36 4 81 0 COL6A3,MLPH,AC112721.1,AC112715.2
SE_02_026500233 chr2:237254967-237327381 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 233 14 2274 45 5 108 192 COL6A3
SE_02_086900621 chr2:237255556-237259494 Sample_02_0869 Fibroblast VH10_NO_UV 621 1 133 3 0 6 0 COL6A3
SE_00_005300201 chr2:237255632-237300114 Sample_00_0053 Embryo trophoblast cell originated from H1 201 13 1375 28 3 63 0 COL6A3
SE_02_023000390 chr2:237255641-237263764 Sample_02_0230 Umbilical cord ID60 390 8 268 9 0 11 0 COL6A3
SE_02_095100016 chr2:237255643-237360560 Sample_02_0951 HMSCs hMSCs 16 49 3400 71 11 213 2165 COL6A3
SE_02_114500230 chr2:237256111-237384705 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 230 31 4175 78 13 331 3527 COL6A3
SE_01_009300913 chr2:237256146-237327901 Sample_01_0093 Aorta ascending aorta 913 20 2268 46 5 98 192 COL6A3
SE_02_037600464 chr2:237256569-237265373 Sample_02_0376 Skeletal muscle RMS237 464 3 287 10 0 20 0 COL6A3
SE_02_152700109 chr2:237256849-237326783 Sample_02_1527 Embryo naive embryonic stem cell 109 33 2205 44 5 98 192 COL6A3
SE_02_039500279 chr2:237262493-237296702 Sample_02_0395 Mammary gland BT-549 279 8 1036 19 3 49 0 COL6A3
SE_02_144400024 chr2:237276261-237325771 Sample_02_1444 Adipose SW872_Empty Vector 24 12 1592 23 5 56 172 COL6A3
SE_02_063200299 chr2:237276299-237300945 Sample_02_0632 Gastrointestinal Stromal GIST-48B_DMSO 299 9 772 6 3 24 0 COL6A3
SE_02_055400125 chr2:237276798-237321809 Sample_02_0554 Other Aska shSSX 125 14 1461 20 5 35 0 COL6A3
SE_02_036600168 chr2:237276884-237327658 Sample_02_0366 Skeletal muscle NCI0082 168 8 1628 23 5 59 192 COL6A3
SE_02_024400005 chr2:237277035-237354002 Sample_02_0244 Foreskin foreskin_D11 5 18 2533 43 10 151 1592 COL6A3
SE_02_144900106 chr2:237277102-237316519 Sample_02_1449 Adipose SW872_YAP_TFE3 106 9 1272 14 4 32 0 COL6A3
SE_02_144700040 chr2:237277248-237326607 Sample_02_1447 Adipose SW872_CAMTA1 40 12 1585 22 5 59 192 COL6A3
SE_02_088900863 chr2:237277678-237328349 Sample_02_0889 Heart left ventricle_LV1183 863 15 1628 24 5 59 192 COL6A3
SE_01_009200014 chr2:237277777-237515380 Sample_01_0092 Vagina vagina 14 55 7568 411 25 536 4460 COL6A3,MLPH
SE_02_141500102 chr2:237277788-237323405 Sample_02_1415 Brain DIPGIV 102 17 1480 20 5 37 0 COL6A3
SE_02_086900844 chr2:237277791-237280290 Sample_02_0869 Fibroblast VH10_NO_UV 844 1 85 0 0 1 0 COL6A3
SE_01_011100663 chr2:237277799-237300663 Sample_01_0111 Brain SK-N-SH 663 8 723 5 3 24 0 COL6A3
SE_01_009100273 chr2:237277819-237362772 Sample_01_0091 Uterus uterus 273 13 2799 48 12 178 2300 COL6A3
SE_01_007800033 chr2:237277829-237450691 Sample_01_0078 Heart left ventricle heart-left-ventricle 33 22 5458 155 18 453 3921 COL6A3,MLPH
SE_01_011700137 chr2:237277831-237327683 Sample_01_0117 Lung fibroblast of lung 137 14 1598 23 5 59 192 COL6A3,MLPH,AC112715.2
SE_02_045200016 chr2:237277846-237442170 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 16 47 5164 121 16 453 3921 COL6A3,MLPH
SE_02_044100029 chr2:237277859-237316289 Sample_02_0441 Bone M112 29 20 1242 13 4 32 0 COL6A3
SE_02_144800073 chr2:237277880-237316389 Sample_02_1448 Adipose SW872_YAP5SA 73 11 1243 13 4 32 0 COL6A3
SE_02_026100900 chr2:237277881-237326725 Sample_02_0261 Osteoblastic hFOB_differentiated 900 6 1566 22 5 59 192 COL6A3
SE_02_090301152 chr2:237277887-237327724 Sample_02_0903 Heart left ventricle_DCM_LV1009 1152 13 1601 23 5 59 192 COL6A3
SE_01_008900150 chr2:237277922-237362440 Sample_01_0089 Transverse colon transverse-colon 150 9 2786 48 12 178 2300 COL6A3
SE_01_007500477 chr2:237277923-237361988 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 477 23 2771 48 11 176 2294 COL6A3
SE_02_144600096 chr2:237277945-237305687 Sample_02_1446 Adipose SW872_TAZ_CAMTA1 96 7 903 6 4 24 0 COL6A3
SE_01_008300459 chr2:237277990-237333685 Sample_01_0083 Sigmoid colon sigmoid-colon 459 8 1759 32 5 67 242 COL6A3
SE_02_147200012 chr2:237277993-237483715 Sample_02_1472 Fetal lung IMR-90 12 51 6440 283 24 510 3921 COL6A3,MLPH,MIR6811,AC112721.1,AC112715.2
SE_02_118600752 chr2:237278009-237321991 Sample_02_1186 Brain GBM15 752 13 1430 20 5 35 0 COL6A3
SE_02_037200057 chr2:237278026-237317636 Sample_02_0372 Skeletal muscle RMS008 57 5 1281 15 4 32 0 COL6A3
SE_02_084000185 chr2:237278038-237332900 Sample_02_0840 Embryo hNPCs_R1159Q/+ 185 15 1735 32 5 65 192 COL6A3
SE_01_007400469 chr2:237278056-237331054 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 469 8 1699 32 5 59 192 COL6A3
SE_01_010900195 chr2:237278057-237361757 Sample_01_0109 Colon transverse colon_54y 195 32 2758 48 11 175 2255 COL6A3
SE_02_135501058 chr2:237278062-237301223 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 1058 4 734 5 3 24 0 COL6A3
SE_01_007700450 chr2:237278064-237333790 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 450 8 1764 32 5 67 248 COL6A3
SE_02_113300242 chr2:237278066-237316776 Sample_02_1133 Liver Hepatic stellate cells 242 7 1253 14 4 32 0 COL6A3,COPS8
SE_02_044700469 chr2:237278070-237318426 Sample_02_0447 Lung lung metastasis from primary osteosarcoma tumor M2 469 21 1307 16 4 32 0 COL6A3
SE_02_081600730 chr2:237278073-237327581 Sample_02_0816 Ovary Clear cell ovarian cancer 730 24 1587 22 5 59 192 COL6A3
SE_01_010700817 chr2:237278078-237361797 Sample_01_0107 Esophagus esophagus squamous epithelium 817 29 2760 48 11 176 2268 COL6A3
SE_02_090601096 chr2:237278085-237327721 Sample_02_0906 Heart left ventricle_DCM_LV1072 1096 14 1596 23 5 59 192 COL6A3
SE_02_135601056 chr2:237278130-237300877 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 1056 4 721 5 3 24 0 COL6A3
SE_02_158300030 chr2:237278157-237441943 Sample_02_1583 Fetal lung IMR90_empty_GM 30 63 5147 121 16 453 3921 COL6A3,MLPH,AC112721.1,AC112715.2
SE_02_067100428 chr2:237278172-237326308 Sample_02_0671 Mammary gland breast cancer_DSG 428 15 1544 22 5 57 192 COL6A3
SE_02_088600179 chr2:237278175-237330951 Sample_02_0886 Skin foreskin_ p63KLF4 179 17 1689 32 5 59 192 COL6A3
SE_01_003700914 chr2:237278178-237301172 Sample_01_0037 Liver hepatocyte 914 4 728 5 3 24 0 COL6A3
SE_02_006100137 chr2:237278194-237291611 Sample_02_0061 Adipose hMADS-3_white 137 3 415 5 2 15 0 COL6A3
SE_02_138000116 chr2:237278199-237361983 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 116 45 2763 48 11 176 2294 COL6A3
SE_01_002900018 chr2:237278204-237361842 Sample_01_0029 Lung fibroblast-of-lung 18 24 2756 48 11 176 2276 COL6A3
SE_02_137400005 chr2:237278217-237476440 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 5 99 6221 246 23 508 3921 COL6A3,MLPH,MIR6811
SE_02_091101192 chr2:237278239-237326690 Sample_02_0911 Heart left ventricle_DCM_LV1290 1192 11 1555 22 5 59 192 COL6A3
SE_00_001500193 chr2:237278244-237284750 Sample_00_0015 Lung IMR-90 193 1 207 3 1 9 0 COL6A3
SE_02_091700601 chr2:237278276-237328102 Sample_02_0917 Heart left ventricle_DCM_LV1433 601 17 1603 23 5 59 192 COL6A3
SE_02_088201111 chr2:237278310-237316587 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1111 9 1231 14 4 32 0 COL6A3
SE_02_139900327 chr2:237278317-237308459 Sample_02_1399 Bone U2OS_siMLL3.1 327 20 978 6 4 24 0 COL6A3
SE_02_137700006 chr2:237278318-237483382 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 6 80 6420 281 24 510 3921 COL6A3,MLPH,MIR6811
SE_02_091400507 chr2:237278319-237327845 Sample_02_0914 Heart left ventricle_DCM_LV1342 507 21 1593 23 5 59 192 COL6A3
SE_01_011000627 chr2:237278321-237327779 Sample_01_0110 Aorta thoracic aorta_37y 627 16 1589 23 5 59 192 COL6A3
SE_02_137500003 chr2:237278341-237483493 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 3 107 6425 282 24 510 3921 COL6A3,MLPH,MIR6811
SE_00_002500438 chr2:237278362-237331025 Sample_00_0025 Muscle of leg muscle-of-leg 438 9 1688 32 5 59 192 COL6A3
SE_02_009100264 chr2:237278363-237301290 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 264 4 727 5 3 24 0 COL6A3
SE_02_007400248 chr2:237278365-237315886 Sample_02_0074 Other 90-8TL_PDJQ 248 8 1212 13 4 32 0 COL6A3
SE_02_141900243 chr2:237278373-237307012 Sample_02_1419 Brain hNSC 243 10 937 6 4 24 0 COL6A3
SE_02_126800252 chr2:237278407-237306564 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 252 6 914 6 4 24 0 COL6A3
SE_02_112800183 chr2:237278442-237327225 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 183 27 1564 22 5 59 192 COL6A3
SE_02_088001249 chr2:237278458-237316276 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1249 8 1222 13 4 32 0 COL6A3
SE_02_126000218 chr2:237278462-237315779 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 218 12 1202 13 4 32 0 COL6A3
SE_02_150600043 chr2:237278466-237327029 Sample_02_1506 Brain SHEP with tetracycline inducible MYC_DOX_6HR 43 25 1556 22 5 59 192 COL6A3
SE_02_125900799 chr2:237278468-237315911 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 799 12 1207 13 4 32 0 COL6A3
SE_02_043800151 chr2:237278472-237316427 Sample_02_0438 Bone HOS 151 17 1224 13 4 32 0 COL6A3
SE_02_126100436 chr2:237278474-237306191 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 436 10 898 6 4 24 0 COL6A3
SE_02_124100097 chr2:237278484-237316631 Sample_02_1241 Skin MCC26_virus_negative 97 11 1226 14 4 32 0 COL6A3
SE_02_088301001 chr2:237278486-237316286 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 1001 8 1220 13 4 32 0 COL6A3
SE_02_126601204 chr2:237278502-237316317 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 1204 7 1220 13 4 32 0 COL6A3
SE_02_150400040 chr2:237278508-237326003 Sample_02_1504 Brain SHEP with tetracycline inducible MYCN_0HR 40 20 1528 22 5 56 192 COL6A3
SE_02_015800633 chr2:237278516-237316056 Sample_02_0158 Brain U87_EGFRvIII_erlotinib 633 10 1212 13 4 32 0 COL6A3
SE_02_137800207 chr2:237278538-237361403 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 207 29 2728 48 11 174 2225 COL6A3
SE_02_017400044 chr2:237278561-237292397 Sample_02_0174 Lung IMR-90_DMSO_2 44 6 426 5 2 18 0 COL6A3
SE_02_150500036 chr2:237278619-237326812 Sample_02_1505 Brain SHEP with tetracycline inducible MYC_DOX_2HR 36 22 1543 22 5 59 192 COL6A3
SE_02_009200291 chr2:237278629-237300755 Sample_02_0092 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_3 291 8 699 5 3 24 0 COL6A3
SE_02_041900971 chr2:237278641-237315864 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 971 12 1200 13 4 32 0 COL6A3
SE_01_001900139 chr2:237278676-237326012 Sample_01_0019 Brain and spinal cord astrocyte 139 6 1524 22 5 56 192 COL6A3
SE_02_030700039 chr2:237278736-237328330 Sample_02_0307 Neuroblastoma SJNB12 39 7 1596 24 5 59 192 COL6A3
SE_02_094100034 chr2:237278741-237326189 Sample_02_0941 Brain T98G 34 14 1525 22 5 57 192 COL6A3
SE_02_126200138 chr2:237278810-237315301 Sample_02_1262 Bone Im-GCT-3504_G34W 138 7 1178 12 4 27 0 COL6A3
SE_02_127200509 chr2:237278844-237306860 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 509 10 916 6 4 24 0 COL6A3
SE_02_113700405 chr2:237278958-237316021 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 405 14 1200 13 4 32 0 COL6A3
SE_02_023000375 chr2:237278971-237291464 Sample_02_0230 Umbilical cord ID60 375 7 387 5 2 12 0 COL6A3
SE_02_044800354 chr2:237278989-237311047 Sample_02_0448 Bone MNNG 354 13 1031 8 4 24 0 COL6A3
SE_00_005600945 chr2:237279017-237328494 Sample_00_0056 Sigmoid colon sigmoid colon 3y 945 31 1595 24 5 59 192 COL6A3
SE_02_022900282 chr2:237279042-237292207 Sample_02_0229 Umbilical cord ID01 282 9 409 5 2 18 0 COL6A3
SE_00_004300127 chr2:237279086-237328778 Sample_00_0043 Stomach stomach_96d 127 9 1599 24 5 59 192 COL6A3
SE_02_106700203 chr2:237279114-237315123 Sample_02_1067 Bone SJSA-1 203 11 1166 11 4 25 0 COL6A3
SE_02_077100956 chr2:237279163-237305735 Sample_02_0771 Ovary OVCA429_shGRHL2 956 17 872 6 4 24 0 COL6A3
SE_02_087901227 chr2:237279223-237316414 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 1227 9 1199 13 4 32 0 COL6A3
SE_02_066900162 chr2:237279254-237334194 Sample_02_0669 Prostate prostate cancer_DSG 162 23 1739 32 5 67 248 COL6A3
SE_02_082400058 chr2:237279359-237305408 Sample_02_0824 Stomach LMSU 58 8 847 6 4 24 0 COL6A3
SE_01_011501059 chr2:237279382-237316398 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 1059 11 1197 13 4 32 0 COL6A3
SE_02_156800830 chr2:237279461-237295309 Sample_02_1568 Heart Cardiac progenitor cells 830 4 482 5 2 19 0 COL6A3
SE_02_008900376 chr2:237279523-237301026 Sample_02_0089 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3 376 6 681 5 3 23 0 COL6A3
SE_02_137900398 chr2:237279543-237316439 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 398 16 1191 13 4 31 0 COL6A3
SE_02_092400422 chr2:237279697-237328139 Sample_02_0924 Heart fetal heart_PCW10_12569 422 15 1558 23 5 58 192 COL6A3
SE_00_002300589 chr2:237279768-237316842 Sample_00_0023 Embryo mesenchymal-stem-cell 589 6 1193 14 4 31 0 COL6A3
SE_02_092200480 chr2:237280521-237330551 Sample_02_0922 Heart fetal heart_PCW10_12434 480 16 1601 31 5 56 192 COL6A3
SE_02_092300527 chr2:237280741-237330312 Sample_02_0923 Heart fetal heart_PCW10_12522 527 15 1580 31 5 56 192 COL6A3
SE_02_019700021 chr2:237281304-237316991 Sample_02_0197 Stomach SNU1750 21 10 1156 15 4 29 0 COL6A3
SE_02_031600543 chr2:237281345-237326895 Sample_02_0316 Neuroblastoma CHP212 543 9 1459 22 5 56 192 COL6A3
SE_02_016100149 chr2:237281457-237307083 Sample_02_0161 Brain U87 149 5 843 6 4 21 0 COL6A3
SE_02_053300744 chr2:237287759-237327658 Sample_02_0533 Blood vessel Circle of Willis_54y 744 14 1279 19 3 50 192 COL6A3
SE_02_092100544 chr2:237290033-237333140 Sample_02_0921 Heart embryonic heart_CS22 544 19 1368 27 3 56 192 COL6A3
SE_00_002900163 chr2:237290438-237328291 Sample_00_0029 Ovary ovary 163 26 1232 19 3 50 192 COL6A3
SE_02_053400853 chr2:237306476-237327545 Sample_02_0534 Blood vessel Circle of Willis_60y 853 9 661 16 1 35 192 COL6A3
SE_02_091501074 chr2:237308796-237334253 Sample_02_0915 Heart left ventricle_DCM_LV1371 1074 10 783 26 1 43 248 COL6A3
SE_02_045300170 chr2:237310087-237415094 Sample_02_0453 Neuroblastoma SJNB3 170 52 3337 60 10 394 3921 COL6A3
SE_00_001500576 chr2:237312581-237319743 Sample_00_0015 Lung IMR-90 576 1 253 8 1 9 0 COL6A3
SE_02_156000946 chr2:237313318-237362109 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 946 11 1642 37 7 152 2300 COL6A3
SE_00_005300398 chr2:237313923-237327554 Sample_00_0053 Embryo trophoblast cell originated from H1 398 6 436 11 1 35 192 COL6A3
SE_01_007200157 chr2:237314382-237452516 Sample_01_0072 Breast epithelium breast-epithelium 157 37 4356 150 14 429 3921 COL6A3,MLPH
SE_02_142600645 chr2:237314463-237361847 Sample_02_1426 Shoulder fibroblast_341 645 29 1585 37 7 152 2276 COL6A3
SE_02_083901168 chr2:237314567-237327250 Sample_02_0839 Embryo hNPCs_K755R/+ 1168 4 399 11 1 35 192 COL6A3
SE_02_066800372 chr2:237316123-237328246 Sample_02_0668 Prostate prostate cancer FA 372 4 381 10 1 27 192 COL6A3
SE_00_001500329 chr2:237319766-237329971 Sample_00_0015 Lung IMR-90 329 1 303 10 0 26 192 COL6A3
SE_02_063700109 chr2:237375350-237442116 Sample_02_0637 Fibroblast fibroblast_WT_GM07492 109 24 1920 70 3 203 763 COL6A3,MLPH
SE_01_008900361 chr2:237377353-237450484 Sample_01_0089 Transverse colon transverse-colon 361 9 2151 102 5 200 672 COL6A3,MLPH
SE_01_006600041 chr2:237378066-237443168 Sample_01_0066 Smooth muscle smooth-muscle-cell 41 18 1881 70 3 198 657 COL6A3,MLPH
SE_02_138000004 chr2:237378846-237503061 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 4 65 3768 321 11 260 963 MLPH,COL6A3,MIR6811
SE_02_024300501 chr2:237379383-237415532 Sample_02_0243 Foreskin foreskin_HFFs 501 6 1018 13 1 146 543 COL6A3
SE_02_142500118 chr2:237379545-237441414 Sample_02_1425 Shoulder fibroblast_384 118 13 1778 67 3 179 538 COL6A3,MLPH
SE_02_047400444 chr2:237379577-237441990 Sample_02_0474 Fibroblast umbilical cord Fibroblast 444 20 1790 67 3 179 538 COL6A3,MLPH
SE_02_131000188 chr2:237379617-237484555 Sample_02_1310 Bone marrow ASMSCs 188 21 3101 235 11 236 538 COL6A3,MLPH,MIR6811
SE_02_088600111 chr2:237379885-237503669 Sample_02_0886 Skin foreskin_ p63KLF4 111 20 3761 322 11 247 907 MLPH,COL6A3,MIR6811
SE_02_142600269 chr2:237381282-237460679 Sample_02_1426 Shoulder fibroblast_341 269 16 2363 142 8 204 452 COL6A3,MLPH
SE_01_005600063 chr2:237382736-237484203 Sample_01_0056 Bone osteoblast 63 13 2999 232 11 222 394 COL6A3,MLPH
SE_01_007500857 chr2:237382886-237450663 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 857 12 1994 100 5 165 394 COL6A3,MLPH
SE_02_046500979 chr2:237383053-237422130 Sample_02_0465 Adipose subcutaneous adipocytes 979 20 1099 18 1 138 394 COL6A3
SE_02_145400085 chr2:237383135-237484007 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 85 34 2982 229 11 222 394 COL6A3,MLPH,MIR6811
SE_02_145100117 chr2:237383268-237442130 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 117 19 1689 66 3 165 394 COL6A3,MLPH
SE_01_007700668 chr2:237383280-237450634 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 668 9 1982 100 5 165 394 COL6A3,MLPH
SE_01_009100209 chr2:237383324-237452999 Sample_01_0091 Uterus uterus 209 12 2065 107 5 165 394 COL6A3,MLPH
SE_02_145200182 chr2:237383366-237441991 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 182 16 1682 66 3 165 394 COL6A3,MLPH
SE_02_017500346 chr2:237383532-237442109 Sample_02_0175 Lung IMR-90_Etoposide 346 15 1683 66 3 165 394 COL6A3,MLPH
SE_02_131100160 chr2:237383560-237484582 Sample_02_1311 Bone marrow HDMSCs 160 22 2991 234 11 222 394 COL6A3,MLPH,MIR6811
SE_02_005400043 chr2:237383578-237504199 Sample_02_0054 Lung IMR-90_DMSO_1 43 17 3674 323 11 235 763 COL6A3,MLPH
SE_02_155200355 chr2:237383603-237442942 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 355 21 1709 68 3 165 394 COL6A3,MLPH
SE_02_156600050 chr2:237383635-237484079 Sample_02_1566 Dermal Dermal fibroblast 50 31 2967 231 11 222 394 COL6A3,MLPH,MIR6811,AC112721.1,AC112715.2
SE_02_145500361 chr2:237383646-237414891 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 361 15 884 12 1 128 394 COL6A3
SE_02_026500257 chr2:237384020-237442654 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 257 9 1684 66 3 162 394 COL6A3,MLPH
SE_01_007400626 chr2:237384159-237450702 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 626 7 1961 100 5 162 394 COL6A3,MLPH
SE_02_124600310 chr2:237384281-237476110 Sample_02_1246 Brain LAN5_ATRA 310 24 2723 188 10 216 394 COL6A3,MLPH,MIR6811
SE_02_044600177 chr2:237384439-237484388 Sample_02_0446 Bone osteosarcoma tumor P2 177 37 2960 232 11 218 394 COL6A3,MLPH,MIR6811
SE_02_044400146 chr2:237384699-237503111 Sample_02_0444 Bone osteosarcoma tumor P10 146 42 3597 319 11 231 763 MLPH,COL6A3,MIR6811
SE_02_137800191 chr2:237384707-237442435 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 191 30 1658 66 3 161 394 COL6A3,MLPH
SE_02_086700092 chr2:237387763-237484099 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 92 46 2845 231 11 205 335 COL6A3,MLPH,MIR6811
SE_02_058600046 chr2:237389069-237484917 Sample_02_0586 Chordal patient-derived chordoma MGH_4 46 32 2828 237 11 167 251 COL6A3,MLPH,MIR6811
SE_01_008300616 chr2:237389898-237450613 Sample_01_0083 Sigmoid colon sigmoid-colon 616 7 1781 100 5 108 251 COL6A3,MLPH
SE_02_126700169 chr2:237391016-237441936 Sample_02_1267 Bone Im-GCT-4072_G34W 169 8 1456 64 3 104 251 COL6A3,MLPH
SE_02_044500389 chr2:237391393-237484571 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 389 25 2764 232 11 157 251 COL6A3,MLPH,MIR6811
SE_02_037500312 chr2:237399210-237422389 Sample_02_0375 Skeletal muscle RMS216 312 6 644 14 1 50 98 COL6A3
SE_02_024400199 chr2:237399483-237415107 Sample_02_0244 Foreskin foreskin_D11 199 2 440 8 1 42 98 COL6A3
SE_02_060500217 chr2:237400304-237476079 Sample_02_0605 Skin Skin Fibroblast_DMSO 217 24 2274 184 10 131 98 COL6A3,MLPH,MIR6811,LRRFIP1,PRLH
SE_02_060600217 chr2:237400305-237476087 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 217 23 2274 184 10 131 98 COL6A3,MLPH,MIR6811,LRRFIP1,PRLH
SE_02_126300214 chr2:237400508-237441520 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 214 8 1193 62 3 75 98 COL6A3,MLPH
SE_02_063800602 chr2:237401047-237415005 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 602 9 407 8 1 40 98 COL6A3
SE_01_008801310 chr2:237402078-237483840 Sample_01_0088 Tibial nerve tibial-nerve 1310 11 2453 223 11 132 98 COL6A3,MLPH
SE_02_030700162 chr2:237402110-237436370 Sample_02_0307 Neuroblastoma SJNB12 162 5 1027 49 2 75 98 COL6A3
SE_02_151700394 chr2:237402428-237437013 Sample_02_1517 Mammary gland non-transformed human mammary epithelial cell 394 6 1037 51 2 75 98 COL6A3,MLPH,AC112721.1
SE_02_010700145 chr2:237402479-237442974 Sample_02_0107 Endometrium EEC16 145 4 1189 63 3 75 98 COL6A3,MLPH
SE_01_002900362 chr2:237402549-237435256 Sample_01_0029 Lung fibroblast-of-lung 362 8 976 44 2 65 98 COL6A3
SE_02_037200494 chr2:237402557-237414885 Sample_02_0372 Skeletal muscle RMS008 494 3 363 7 1 40 98 COL6A3
SE_00_001500573 chr2:237402590-237415126 Sample_00_0015 Lung IMR-90 573 2 367 7 1 40 98 COL6A3
SE_02_091300800 chr2:237402736-237456855 Sample_02_0913 Heart left ventricle_DCM_LV1304 800 20 1655 119 6 91 98 COL6A3,MLPH
SE_02_063600290 chr2:237402874-237442200 Sample_02_0636 Skin BJ5ta 290 12 1159 61 3 75 98 COL6A3,MLPH
SE_02_023400781 chr2:237403487-237459312 Sample_02_0234 Tonsil Th17 781 7 1710 128 6 95 98 COL6A3,MLPH
SE_00_002500734 chr2:237405021-237436933 Sample_00_0025 Muscle of leg muscle-of-leg 734 4 970 50 2 73 98 COL6A3
SE_02_039900064 chr2:237405163-237484857 Sample_02_0399 Mammary gland SUM159PT-BT-474 64 14 2408 232 11 130 98 COL6A3,MLPH
SE_02_045100225 chr2:237405272-237442005 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 225 9 1083 61 3 73 98 COL6A3,MLPH
SE_02_081601118 chr2:237405484-237442737 Sample_02_0816 Ovary Clear cell ovarian cancer 1118 10 1101 63 3 73 98 COL6A3,MLPH
SE_02_158401486 chr2:237407362-237414782 Sample_02_1584 Brain U87 GBM_Mock 1486 1 233 6 1 32 98 COL6A3
SE_02_026400072 chr2:237407434-237476975 Sample_02_0264 Skeletal muscle 7250-empty 72 10 2113 188 10 124 98 COL6A3,MLPH
SE_02_127901496 chr2:237407447-237415293 Sample_02_1279 Bone Mesenchymal stem cells 1496 1 245 6 1 32 98 COL6A3
SE_02_127800554 chr2:237407561-237436579 Sample_02_1278 Chordoma UCH1_DMSO_48h 554 5 881 48 1 67 98 COL6A3,MLPH
SE_02_027400970 chr2:237407720-237436995 Sample_02_0274 Endometriosis hTERT_KD 970 5 892 50 1 67 98 COL6A3
SE_02_061100510 chr2:237407909-237456393 Sample_02_0611 Liposarcoma DDLPS_T1 510 12 1498 115 5 72 98 COL6A3,MLPH
SE_02_132801273 chr2:237408004-237422177 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 1273 4 413 12 0 37 98 COL6A3
SE_02_020900253 chr2:237408036-237483945 Sample_02_0209 Lung MRC-5_MRC5_1DPT 253 16 2294 223 10 121 98 COL6A3,MLPH
SE_02_007300462 chr2:237408108-237436461 Sample_02_0073 Other 90-8TL_DMSO 462 5 866 48 1 64 98 COL6A3
SE_01_011700689 chr2:237408137-237433691 Sample_01_0117 Lung fibroblast of lung 689 7 765 37 1 52 98 COL6A3,MLPH,AC112721.1,AC112715.2
SE_02_094100208 chr2:237408173-237435641 Sample_02_0941 Brain T98G 208 6 837 44 1 54 98 COL6A3,PRLH
SE_02_086800131 chr2:237408194-237483426 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 131 31 2277 220 10 121 98 COL6A3,MLPH,MIR6811
SE_02_141500333 chr2:237408227-237435787 Sample_02_1415 Brain DIPGIV 333 9 843 46 1 55 98 COL6A3
SE_02_088300926 chr2:237408254-237475936 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 926 9 2063 182 9 119 98 COL6A3,MLPH,MIR6811,AC112721.1
SE_02_104801603 chr2:237408262-237437954 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1603 10 903 52 1 64 98 COL6A3,MLPH
SE_02_028200083 chr2:237408478-237476128 Sample_02_0282 Lung IMR-90 83 15 2050 182 9 119 98 COL6A3,MLPH
SE_02_127200521 chr2:237408621-237433943 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 521 11 752 37 1 43 98 COL6A3
SE_02_157900063 chr2:237408623-237484110 Sample_02_1579 Renal 786-M1A 63 17 2276 225 10 112 98 COL6A3,MLPH,MIR6811
SE_02_151600399 chr2:237408754-237442471 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 399 11 995 60 2 55 98 COL6A3,MLPH
SE_02_137601143 chr2:237409377-237414249 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 1143 1 153 5 0 15 67 COL6A3
SE_02_049800303 chr2:237409710-237441524 Sample_02_0498 Fetal lung IMR90 Senescent_1 303 15 941 60 2 55 98 COL6A3,MLPH,AC112721.1,AC112715.2
SE_02_086900556 chr2:237409910-237416062 Sample_02_0869 Fibroblast VH10_NO_UV 556 1 176 7 0 21 98 COL6A3
SE_02_028000137 chr2:237410199-237484239 Sample_02_0280 Mammary gland SUM159_DMSO_24h 137 9 2233 226 10 110 98 COL6A3,MLPH
SE_02_057200638 chr2:237410212-237436656 Sample_02_0572 Brain LN229_1_mM_glucose 638 9 799 48 1 53 98 COL6A3,MLPH
SE_02_081500105 chr2:237410256-237484302 Sample_02_0815 Mammary gland SUM159PT 105 15 2230 226 10 110 98 COL6A3,MLPH,MIR6811
SE_02_150500293 chr2:237410307-237441956 Sample_02_1505 Brain SHEP with tetracycline inducible MYC_DOX_2HR 293 7 927 60 2 53 98 COL6A3,MLPH
SE_02_135500845 chr2:237410319-237442395 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 845 4 943 60 2 53 98 COL6A3,MLPH
SE_02_132200390 chr2:237410322-237436027 Sample_02_1322 Connective Tissue HT1080_WT 390 5 783 48 1 51 98 COL6A3
SE_02_132000296 chr2:237410325-237438033 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 296 6 834 52 1 53 98 COL6A3,MLPH
SE_02_043800166 chr2:237410326-237483747 Sample_02_0438 Bone HOS 166 19 2215 222 10 110 98 COL6A3,MLPH,MIR6811
SE_02_043700261 chr2:237410342-237441284 Sample_02_0437 Bone 143B 261 8 913 60 2 53 98 COL6A3,MLPH
SE_02_126400347 chr2:237410395-237437484 Sample_02_1264 Bone Im-GCT-4072_G34W KO 347 5 822 51 1 53 98 COL6A3,MLPH
SE_02_150600489 chr2:237410396-237441488 Sample_02_1506 Brain SHEP with tetracycline inducible MYC_DOX_6HR 489 7 915 60 2 53 98 COL6A3,MLPH
SE_02_057100559 chr2:237410407-237442143 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 559 10 931 60 2 53 98 COL6A3,MLPH
SE_02_105600344 chr2:237410427-237436853 Sample_02_1056 Esophagus ChTRT 344 4 800 48 1 53 98 COL6A3,MLPH
SE_02_102100449 chr2:237410587-237441947 Sample_02_1021 Mammary gland SUM159R 449 8 916 60 2 53 98 COL6A3,MLPH
SE_02_126800143 chr2:237411089-237436537 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 143 5 776 47 1 53 98 COL6A3,MLPH
SE_02_126200871 chr2:237411675-237436601 Sample_02_1262 Bone Im-GCT-3504_G34W 871 5 754 47 1 50 98 COL6A3,MLPH
SE_02_137900796 chr2:237411684-237436761 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 796 7 758 47 1 50 98 COL6A3,MLPH
SE_02_037600198 chr2:237411809-237417432 Sample_02_0376 Skeletal muscle RMS237 198 2 176 7 0 16 98 COL6A3
SE_02_022900251 chr2:237411842-237435704 Sample_02_0229 Umbilical cord ID01 251 7 724 44 1 41 98 COL6A3
SE_02_114500438 chr2:237412023-237455737 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 438 23 1341 110 4 50 98 COL6A3,MLPH
SE_01_001900456 chr2:237421238-237442346 Sample_01_0019 Brain and spinal cord astrocyte 456 3 629 48 2 31 0 MLPH,COL6A3
SE_02_153600306 chr2:237421359-237435879 Sample_02_1536 Mammary gland MDA-MB-231_ER?_L540Q_0min 306 6 462 34 1 19 0 COL6A3
SE_02_153400497 chr2:237421370-237436478 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 497 3 475 36 1 28 0 MLPH,COL6A3
SE_02_105700500 chr2:237421682-237436782 Sample_02_1057 Esophagus GihTRT 500 4 477 36 1 27 0 MLPH,COL6A3
SE_02_127500742 chr2:237421817-237437434 Sample_02_1275 Prostate PC3_Vorinostat 742 10 497 39 1 27 0 MLPH,COL6A3
SE_02_158500012 chr2:237421834-237475817 Sample_02_1585 Blood SupB15 DMSO 12 20 1662 170 9 82 0 MLPH,MIR6811,COL6A3
SE_02_138600737 chr2:237421859-237442385 Sample_02_1386 Peripheral blood Karpas-299_ALK+ 737 9 615 48 2 27 0 MLPH,COL6A3
SE_02_139000277 chr2:237427324-237442092 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 277 7 449 37 1 23 0 MLPH,COL6A3
SE_02_113700201 chr2:237427560-237439839 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 201 1 384 31 0 23 0 MLPH,COL6A3
SE_00_004500464 chr2:237427849-237443667 Sample_00_0045 Thymus thymus 464 4 490 43 1 23 0 MLPH,COL6A3,AC112721.1
SE_02_158401390 chr2:237428645-237436602 Sample_02_1584 Brain U87 GBM_Mock 1390 1 266 19 0 23 0 MLPH,COL6A3
SE_02_108500624 chr2:237429457-237442333 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 624 6 385 29 1 23 0 MLPH,COL6A3
SE_02_138800540 chr2:237429986-237442739 Sample_02_1388 Peripheral blood JB6_ALK+ 540 4 386 31 1 23 0 MLPH,COL6A3
SE_02_016100263 chr2:237430145-237441927 Sample_02_0161 Brain U87 263 4 357 28 1 23 0 MLPH,COL6A3
SE_01_006300416 chr2:237430220-237437052 Sample_01_0063 Skeletal muscle skeletal-muscle-myoblast 416 1 240 18 0 23 0 COL6A3
SE_02_044800205 chr2:237430755-237438058 Sample_02_0448 Bone MNNG 205 1 248 20 0 23 0 MLPH,COL6A3
SE_02_111300968 chr2:237430821-237437228 Sample_02_1113 Bone U2OS 968 3 231 19 0 23 0 MLPH,COL6A3
SE_01_011501315 chr2:237430900-237442215 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 1315 5 353 28 1 23 0 MLPH,COL6A3
SE_02_137601152 chr2:237431666-237436007 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 1152 1 165 14 0 20 0 COL6A3
SE_02_143801403 chr2:237431695-237438784 Sample_02_1438 Liver LSEC 1403 1 237 21 0 22 0 MLPH,COL6A3
SE_02_132100840 chr2:237431716-237436639 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 840 1 179 15 0 22 0 MLPH,COL6A3
SE_02_158600014 chr2:237431917-237475215 Sample_02_1586 Blood SupB15 ACY1035 14 22 1353 148 8 77 0 MLPH,MIR6811,COL6A3
SE_02_155700234 chr2:237435098-237475959 Sample_02_1557 Gastrointestinal Stromal GIST-6_KIT e11/16 234 11 1250 140 8 65 0 MLPH,MIR6811,COL6A3
SE_02_131900162 chr2:237459487-237484130 Sample_02_1319 Connective Tissue HT1080_DDIT3 162 8 714 99 5 37 0 MLPH,MIR6811,COL6A3
Genomic distribution of SEs associated with COL6A3
Genome Browser

The strength of the tissue affected by the gene

Expression of COL6A3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)