SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000188452
Gene: CERKL Gene type: protein_coding
Strand: - External links:
Genomic region: chr2:181536672-181680665 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_003300830 chr2:181565977-181598190 Sample_02_0033 Pancreas pancreatic-islets-F 830 4 798 74 3 92 46 CERKL
SE_02_031000564 chr2:181566127-181588924 Sample_02_0310 Neuroblastoma SJNB8 564 4 569 58 2 79 34 CERKL
SE_02_086300348 chr2:181570836-181598226 Sample_02_0863 Malignant rhaboid tumor TTC1240_empty 348 13 689 60 3 60 27 CERKL
SE_02_077600005 chr2:181570844-181695382 Sample_02_0776 Pancreas EndoC-BH1 5 23 3172 191 12 548 665 NEUROD1,CERKL
SE_02_086200486 chr2:181570991-181597987 Sample_02_0862 Malignant rhaboid tumor TTC1240_SMARCB1 FL 486 7 676 60 3 59 27 CERKL
SE_02_025200021 chr2:181571156-181684802 Sample_02_0252 Neuroblastoma IMR5-75-shMYCN-MYCN_high 21 15 2921 176 9 520 665 CERKL,NEUROD1
SE_02_086600471 chr2:181571330-181598107 Sample_02_0866 Malignant rhaboid tumor TTC1240_SMARCB1_delCC 471 5 679 59 3 58 27 CERKL
SE_02_068900013 chr2:181571408-181696145 Sample_02_0689 Lung NCI-H446_no infection 13 48 3186 193 12 546 665 NEUROD1,CERKL
SE_02_086500500 chr2:181571450-181597719 Sample_02_0865 Malignant rhaboid tumor TTC1240_SMARCB1_R377H 500 7 660 58 3 58 27 CERKL
SE_02_069100006 chr2:181572878-181687018 Sample_02_0691 Lung NCI-H524_no infection 6 42 2919 170 7 537 665 NEUROD1,CERKL
SE_02_144300177 chr2:181574176-181660529 Sample_02_1443 Lung H69M 177 31 2274 134 5 224 239 CERKL,NEUROD1
SE_02_077500834 chr2:181575082-181630983 Sample_02_0775 Pancreas EndoC-BH1_SE 834 14 1446 79 3 143 57 CERKL,NEUROD1
SE_02_106100062 chr2:181601256-181656634 Sample_02_1061 Bone TC71_WT 62 18 1446 78 2 158 69 CERKL,NEUROD1
SE_02_148800062 chr2:181601256-181656634 Sample_02_1488 Bone TC-71 62 18 1446 78 2 158 69 CERKL,NEUROD1
SE_02_147900091 chr2:181604314-181657321 Sample_02_1479 Bone EW-7 91 28 1394 76 2 156 199 CERKL,NEUROD1
SE_02_150800061 chr2:181607470-181644682 Sample_02_1508 Brain NGPz_untreat 61 15 950 44 1 143 17 CERKL,NEUROD1
SE_02_028400380 chr2:181608171-181659735 Sample_02_0284 Pelvis patient 119 380 8 1376 75 3 161 199 CERKL,NEUROD1
SE_02_031000013 chr2:181611142-181680682 Sample_02_0310 Neuroblastoma SJNB8 13 4 1799 104 5 376 543 CERKL,NEUROD1
SE_02_003300034 chr2:181611506-181694871 Sample_02_0033 Pancreas pancreatic-islets-F 34 4 2133 119 8 468 598 CERKL,NEUROD1
SE_02_030200009 chr2:181611678-181682108 Sample_02_0302 Neuroblastoma IMR32 9 4 1826 104 5 399 598 CERKL,NEUROD1
SE_02_128800009 chr2:181612009-181686541 Sample_02_1288 Lung NCI-H524_p8-15 9 31 1914 106 5 443 598 NEUROD1,CERKL
SE_02_108300092 chr2:181612043-181694500 Sample_02_1083 Macula macula 92 22 2108 119 8 468 598 NEUROD1,CERKL
SE_02_106800102 chr2:181612156-181644298 Sample_02_1068 Brain NGP_ctrl 102 12 829 40 1 127 17 CERKL,NEUROD1
SE_02_033800207 chr2:181612536-181643671 Sample_02_0338 Neuroblastoma BE2 207 5 807 39 1 126 17 CERKL,NEUROD1
SE_02_106000181 chr2:181612904-181656641 Sample_02_1060 Bone TC71_SA2 KO 181 13 1160 67 2 138 31 CERKL,NEUROD1
SE_02_025400163 chr2:181613019-181685802 Sample_02_0254 Neuroblastoma IMR5-75 163 23 1886 103 5 442 598 CERKL,NEUROD1
SE_02_004700128 chr2:181613021-181689411 Sample_02_0047 Pancreatic endoderm IIDP/donor790 128 24 1975 110 7 464 598 CERKL,NEUROD1
SE_02_128600006 chr2:181613096-181686731 Sample_02_1286 Lung NCI-H378_p8-15 6 32 1893 103 5 446 598 NEUROD1,CERKL
SE_02_069300152 chr2:181613105-181694840 Sample_02_0693 Lung NCI-H69_no infection 152 37 2094 116 8 468 598 NEUROD1,CERKL
SE_02_147400299 chr2:181614030-181651661 Sample_02_1474 Bone CHLA-10 299 14 983 55 2 134 17 CERKL,NEUROD1
SE_02_007000054 chr2:181614247-181659222 Sample_02_0070 Lung NCI-H69_DMSO 54 14 1212 69 3 148 199 CERKL,NEUROD1
SE_02_052300328 chr2:181614558-181687641 Sample_02_0523 Lung NCIH810 328 28 1881 103 5 464 598 NEUROD1,CERKL
SE_02_147500666 chr2:181614888-181655904 Sample_02_1475 Bone CHLA-25 666 17 1081 62 2 138 17 CERKL,NEUROD1
SE_02_049401128 chr2:181614936-181643659 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 1128 8 743 36 1 126 17 CERKL,NEUROD1
SE_02_049500469 chr2:181615293-181643880 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 469 6 737 36 1 126 17 CERKL,NEUROD1
SE_02_148100489 chr2:181628231-181658865 Sample_02_1481 Bone MIC 489 13 818 58 3 87 182 CERKL,NEUROD1
SE_01_004000243 chr2:181631111-181691082 Sample_01_0040 Haematopoietic and lymphoid tissue Karpas-422 243 5 1522 95 7 382 581 CERKL,NEUROD1
SE_01_002100642 chr2:181631290-181644004 Sample_01_0021 Skin bipolar-neuron 642 2 310 19 0 42 0 CERKL,NEUROD1
SE_02_129300041 chr2:181631538-181643447 Sample_02_1293 Lung JHU-LX22-SCLC PDX 41 2 292 19 0 42 0 CERKL,NEUROD1
SE_02_011700237 chr2:181631798-181690140 Sample_02_0117 Haematopoietic and lymphoid tissue KARPAS-422 237 5 1480 92 6 380 581 CERKL,NEUROD1
SE_02_013300052 chr2:181742628-181793219 Sample_02_0133 Thymus TC-797_JQ1_4h 52 12 1377 45 3 172 0 NEUROD1,CERKL
SE_02_080000121 chr2:181743102-181783229 Sample_02_0800 Brain 3679 121 7 1100 44 3 151 0 NEUROD1,CERKL
SE_02_143201649 chr2:181744591-181791261 Sample_02_1432 Bone A673 STAG2 WT 1649 12 1278 44 3 158 0 NEUROD1,CERKL
Genomic distribution of SEs associated with CERKL
Genome Browser

The strength of the tissue affected by the gene

Expression of CERKL

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)