Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000156535 |
| Gene: | CD109 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr6:73695785-73828316 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_030100207 | chr6:73639695-73735283 |
Sample_02_0301 | Neuroblastoma | GIMEN | 207 | 14 | 2445 | 203 | 10 | 111 | 787 | CD109,SLC17A5 |
| SE_02_105400132 | chr6:73660453-73725433 |
Sample_02_1054 | Esophagus | SKGT4 | 132 | 17 | 1652 | 118 | 3 | 96 | 468 | CD109,LOC101928489,SLC17A5 |
| SE_02_028000536 | chr6:73678841-73724016 |
Sample_02_0280 | Mammary gland | SUM159_DMSO_24h | 536 | 6 | 1170 | 81 | 1 | 89 | 468 | CD109,SLC17A5 |
| SE_02_031700589 | chr6:73690733-73725204 |
Sample_02_0317 | Neuroblastoma | GICAN | 589 | 6 | 856 | 72 | 1 | 83 | 468 | CD109,SLC17A5 |
| SE_02_011200855 | chr6:73690944-73705765 |
Sample_02_0112 | Connective tissue | HT1080_untreated | 855 | 3 | 383 | 22 | 1 | 45 | 444 | CD109,SLC17A5 |
| SE_02_026800766 | chr6:73693737-73725749 |
Sample_02_0268 | Kidney | A-498 | 766 | 8 | 788 | 71 | 1 | 83 | 464 | CD109,SLC17A5 |
| SE_02_002700405 | chr6:73693941-73725657 |
Sample_02_0027 | Umbilical vein | HUVEC_VEGF_4h | 405 | 7 | 780 | 70 | 1 | 83 | 436 | CD109,SLC17A5 |
| SE_03_001301005 | chr6:73693949-73716031 |
Sample_03_0013 | Lung | A549 | 1005 | 3 | 567 | 45 | 1 | 69 | 412 | CD109,SLC17A5 |
| SE_02_001000860 | chr6:73693953-73725466 |
Sample_02_0010 | Kidney | A-498_emptyvector | 860 | 6 | 774 | 69 | 1 | 83 | 436 | CD109,SLC17A5 |
| SE_02_040200217 | chr6:73694020-73733286 |
Sample_02_0402 | Mammary gland | SUM159PT-ZR-75-1 | 217 | 9 | 973 | 81 | 4 | 84 | 479 | CD109,SLC17A5 |
| SE_01_005601057 | chr6:73694034-73724146 |
Sample_01_0056 | Bone | osteoblast | 1057 | 4 | 747 | 67 | 1 | 83 | 426 | CD109,SLC17A5 |
| SE_02_018500920 | chr6:73694099-73706618 |
Sample_02_0185 | Skin | UACC257 | 920 | 2 | 331 | 21 | 1 | 47 | 393 | CD109,SLC17A5 |
| SE_01_004500390 | chr6:73694145-73723588 |
Sample_01_0045 | Mammary gland | mammary-epithelial-cell | 390 | 5 | 734 | 66 | 1 | 83 | 407 | CD109,SLC17A5 |
| SE_02_006300468 | chr6:73694153-73726307 |
Sample_02_0063 | Skin | Keratinocytes | 468 | 5 | 787 | 72 | 1 | 83 | 405 | CD109,SLC17A5 |
| SE_01_004100329 | chr6:73694193-73725651 |
Sample_01_0041 | Skin | keratinocyte | 329 | 5 | 768 | 70 | 1 | 83 | 400 | CD109,SLC17A5 |
| SE_01_003400341 | chr6:73694212-73715319 |
Sample_01_0034 | Colon | HCT116 | 341 | 4 | 540 | 43 | 1 | 69 | 376 | CD109,SLC17A5 |
| SE_02_017100830 | chr6:73694221-73733389 |
Sample_02_0171 | Lung | IMR-90_proliferating | 830 | 8 | 969 | 81 | 4 | 84 | 450 | CD109,SLC17A5 |
| SE_01_002600451 | chr6:73694299-73723806 |
Sample_01_0026 | Umbilical vein | endothelial-cell-of-umbilical-vein | 451 | 4 | 733 | 66 | 1 | 83 | 394 | CD109,SLC17A5 |
| SE_02_005700977 | chr6:73694389-73711571 |
Sample_02_0057 | Mammary gland | vHMEC | 977 | 4 | 437 | 35 | 1 | 49 | 359 | CD109,SLC17A5 |
| SE_02_018200731 | chr6:73694423-73724133 |
Sample_02_0182 | melanoma | LOX-IMVI | 731 | 4 | 732 | 67 | 1 | 82 | 381 | CD109,SLC17A5 |
| SE_02_033600483 | chr6:73694473-73729892 |
Sample_02_0336 | Haematopoietic and lymphoid tissue | SET2 | 483 | 4 | 875 | 77 | 3 | 82 | 378 | CD109,SLC17A5 |
| SE_02_017300181 | chr6:73694486-73736433 |
Sample_02_0173 | Lung | IMR-90_senescent | 181 | 10 | 1035 | 90 | 5 | 85 | 459 | CD109,SLC17A5 |
| SE_02_020900814 | chr6:73701091-73732858 |
Sample_02_0209 | Lung | MRC-5_MRC5_1DPT | 814 | 8 | 784 | 71 | 3 | 61 | 76 | CD109,SLC17A5 |
| SE_02_005500479 | chr6:73702101-73724187 |
Sample_02_0055 | Lung | IMR-90_Nutlin-3a | 479 | 3 | 552 | 56 | 0 | 57 | 24 | CD109,SLC17A5 |
| SE_02_017201286 | chr6:73788631-73814151 |
Sample_02_0172 | Lung | IMR-90_quiescent | 1286 | 4 | 698 | 80 | 1 | 41 | 294 | CD109 |
| SE_02_014000252 | chr6:74040752-74076386 |
Sample_02_0140 | Kidney | RT242 | 252 | 11 | 905 | 35 | 7 | 59 | 40 | CD109 |
| SE_02_011100489 | chr6:74064231-74076180 |
Sample_02_0111 | Ovaries | IOE4 | 489 | 1 | 324 | 15 | 1 | 50 | 40 | CD109 |
| SE_02_018200370 | chr6:74064733-74077624 |
Sample_02_0182 | melanoma | LOX-IMVI | 370 | 2 | 356 | 18 | 1 | 46 | 40 | CD109 |
| SE_02_017300735 | chr6:74247883-74270728 |
Sample_02_0173 | Lung | IMR-90_senescent | 735 | 5 | 749 | 61 | 1 | 86 | 0 | CD109 |
| SE_02_020901306 | chr6:74247885-74260719 |
Sample_02_0209 | Lung | MRC-5_MRC5_1DPT | 1306 | 4 | 456 | 42 | 1 | 42 | 0 | CD109 |
| SE_02_017200349 | chr6:74247887-74292307 |
Sample_02_0172 | Lung | IMR-90_quiescent | 349 | 7 | 1371 | 72 | 3 | 119 | 0 | CD109 |
| SE_02_021001059 | chr6:74256273-74290623 |
Sample_02_0210 | Lung | MRC-5_N_1DPT | 1059 | 5 | 975 | 39 | 3 | 93 | 0 | CD109 |
Genomic distribution of SEs associated with CD109