SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_001000860
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: A-498_emptyvector
Genomic region: chr6:73693953-73725466
Size: 31513
Super-enhancer rank 860
Number of SE elements: 6
ChIP density(Case|Control): 35943.7278|1285.7304
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CD109 ;
ROSE Overlap CD109 ;
ROSE Proximal SLC17A5 ;
ROSE Closest CD109 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CD109 ; LOC101928489 ; SLC17A5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_001000860 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers