Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000249348
Gene: UGDH-AS1 Gene type: lncRNA
Strand: + External links:
Genomic region: chr4:39528019-39594707 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_141600138 chr4:39495763-39588411 Sample_02_1416 Brain SF9402 138 15 2275 315 4 134 1254 UGDH,UGDH-AS1,SMIM14,RPL9,LOC401127,LIAS
SE_02_142800698 chr4:39498156-39566802 Sample_02_1428 Shoulder fibroblast_316 698 19 1683 245 4 131 1129 UGDH,UGDH-AS1,SMIM14,RPL9,LOC401127,LIAS
SE_02_142600425 chr4:39501028-39566967 Sample_02_1426 Shoulder fibroblast_341 425 13 1620 231 4 118 990 UGDH,UGDH-AS1,SMIM14,RPL9,LOC401127,LIAS
SE_02_076500414 chr4:39511359-39549547 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 414 12 961 150 3 47 480 UGDH,UGDH-AS1,LOC401127
SE_02_123300023 chr4:39511930-39549477 Sample_02_1233 Lung PC9_miR-4497 mimic 23 20 942 147 3 47 480 UGDH,UGDH-AS1,LOC401127
SE_02_098901227 chr4:39512775-39574757 Sample_02_0989 Kidney kidney cortex_WT 1227 17 1502 202 3 84 710 UGDH,UGDH-AS1,SMIM14,LOC401127
SE_02_085300307 chr4:39512806-39549849 Sample_02_0853 Mammary gland MCF7L-TamR 307 12 932 145 3 47 480 UGDH,UGDH-AS1,LOC401127
SE_02_052600106 chr4:39513776-39575002 Sample_02_0526 Mammary gland MCF7 TRPS1 KO 106 23 1485 200 3 84 710 UGDH,UGDH-AS1,SMIM14,LOC401127
SE_02_077700125 chr4:39514152-39549729 Sample_02_0777 Mammary gland MCF7_TAMR 125 7 894 135 3 44 466 UGDH,UGDH-AS1,LOC401127
SE_02_056800095 chr4:39514291-39574629 Sample_02_0568 Mammary gland MCF7L_E2_4h 95 19 1458 190 3 81 685 UGDH,UGDH-AS1,SMIM14,LOC401127
SE_02_056700181 chr4:39514323-39549548 Sample_02_0567 Mammary gland MCF7L-P_TAMR 181 13 885 133 3 44 453 UGDH,UGDH-AS1,LOC401127
SE_02_056600254 chr4:39514323-39549726 Sample_02_0566 Mammary gland MCF7L-P_E2_24h 254 17 889 133 3 44 453 UGDH,UGDH-AS1,LOC401127
SE_02_056400163 chr4:39514333-39549641 Sample_02_0564 Mammary gland MCF7L-P_E2_1h 163 17 887 133 3 44 452 UGDH,UGDH-AS1,LOC401127
SE_02_066700061 chr4:39514407-39549825 Sample_02_0667 Mammary gland MCF7_FA 61 11 889 133 3 44 448 UGDH,UGDH-AS1,LOC401127
SE_02_052700237 chr4:39514437-39549835 Sample_02_0527 Mammary gland MCF7_WT 237 12 888 133 3 44 448 UGDH,UGDH-AS1,LOC401127
SE_02_155100140 chr4:39525008-39545735 Sample_02_1551 Gastrointestinal Stromal MaMel 140 3 545 83 2 18 418 UGDH,UGDH-AS1,LOC401127
SE_02_049500045 chr4:39538948-39570446 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 45 8 709 87 2 45 186 UGDH-AS1,SMIM14,UGDH
SE_02_049400061 chr4:39539175-39570724 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 61 11 708 87 2 45 186 UGDH-AS1,SMIM14,UGDH
SE_02_052400384 chr4:39541247-39570472 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 384 10 663 83 2 45 186 UGDH-AS1,SMIM14,UGDH
SE_02_049300229 chr4:39541304-39570199 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 229 8 660 82 2 45 186 UGDH-AS1,SMIM14,UGDH
SE_02_052500406 chr4:39543063-39569755 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 406 6 596 71 2 45 186 UGDH-AS1,SMIM14,UGDH

Genomic distribution of SEs associated with UGDH-AS1

The strength of the tissue affected by the gene


Expression of UGDH-AS1