Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000043514 |
| Gene: | TRIT1 | Gene type: | protein_coding |
| Strand: | - | External links: |
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| Genomic region: | chr1:39838110-39883511 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_128700001 | chr1:39814757-39901739 |
Sample_02_1287 | Lung | NCI-H510_p8-15 | 1 | 33 | 2294 | 276 | 8 | 409 | 1592 | MYCL,TRIT1,OXCT2,BMP8B |
| SE_02_069000001 | chr1:39815680-39879362 |
Sample_02_0690 | Lung | NCI-H510A_no infection | 1 | 22 | 1739 | 209 | 6 | 203 | 582 | TRIT1,OXCT2,BMP8B,MYCL |
| SE_02_129200024 | chr1:39816901-39860051 |
Sample_02_1292 | Lung | JHU-LX110-SCLC PDX | 24 | 24 | 1177 | 150 | 6 | 195 | 582 | TRIT1,OXCT2,BMP8B,MYCL |
| SE_02_124800097 | chr1:39816969-39860068 |
Sample_02_1248 | Bladder | RT4 | 97 | 10 | 1172 | 149 | 6 | 195 | 582 | TRIT1,OXCT2,BMP8B,MYCL |
| SE_02_128200001 | chr1:39818217-39860348 |
Sample_02_1282 | Lung | NCI-H1092_p8-15 | 1 | 15 | 1135 | 146 | 6 | 181 | 582 | TRIT1,OXCT2,BMP8B,MYCL |
| SE_01_002400579 | chr1:39832383-39908901 |
Sample_01_0024 | Blood | CD14-positive-monocyte | 579 | 10 | 1947 | 221 | 6 | 400 | 1722 | TRIT1,MYCL1,BMP8B,MFSD2A |
| SE_02_123900532 | chr1:39832397-39853185 |
Sample_02_1239 | Skin | Waga_virus_positive | 532 | 14 | 550 | 57 | 3 | 114 | 440 | TRIT1,BMP8B,MYCL |
| SE_02_129100003 | chr1:39836029-39860298 |
Sample_02_1291 | Lung | NCI-H889_p8-15 | 3 | 10 | 619 | 72 | 3 | 134 | 582 | TRIT1,BMP8B,MYCL |
| SE_02_123700512 | chr1:39836195-39852826 |
Sample_02_1237 | Skin | MKL2_virus_positive | 512 | 6 | 426 | 42 | 3 | 102 | 419 | TRIT1,BMP8B,MYCL |
| SE_01_002100077 | chr1:39839600-39871237 |
Sample_01_0021 | Skin | bipolar-neuron | 77 | 3 | 866 | 98 | 1 | 130 | 582 | TRIT1,MYCL1 |
| SE_02_021100820 | chr1:39841478-39847890 |
Sample_02_0211 | Lung | MRC-5_NFD_1DPT | 820 | 2 | 155 | 11 | 1 | 72 | 258 | TRIT1 |
| SE_02_068600161 | chr1:39841689-39853269 |
Sample_02_0686 | Lung | NCI-H128_no infection | 161 | 9 | 303 | 25 | 1 | 94 | 382 | TRIT1,MYCL |
| SE_02_128600011 | chr1:39842427-39843765 |
Sample_02_1286 | Lung | NCI-H378_p8-15 | 11 | 2 | 34 | 4 | 0 | 4 | 0 | TRIT1 |
| SE_02_129400210 | chr1:39843379-39859967 |
Sample_02_1294 | Lung | JHU-LX44-SCLC PDX | 210 | 8 | 434 | 49 | 0 | 114 | 487 | TRIT1,MYCL |
| SE_02_129500041 | chr1:39843404-39853798 |
Sample_02_1295 | Lung | JHU-LX48-SCLC PDX | 41 | 7 | 286 | 27 | 0 | 92 | 373 | TRIT1,MYCL |
| SE_02_016900277 | chr1:39849797-39879764 |
Sample_02_0169 | Prostate | LNCaP_R1881 | 277 | 5 | 807 | 95 | 0 | 59 | 258 | TRIT1,MYCL1 |
| SE_02_017000393 | chr1:39849817-39893457 |
Sample_02_0170 | Prostate | LNCaP_R1881_DOX | 393 | 6 | 1156 | 143 | 0 | 115 | 372 | TRIT1,MYCL1 |
| SE_02_016800480 | chr1:39850011-39893725 |
Sample_02_0168 | Prostate | LNCaP | 480 | 5 | 1152 | 142 | 0 | 115 | 363 | TRIT1,MYCL1 |
| SE_02_076400561 | chr1:39850235-39893217 |
Sample_02_0764 | Prostate | LNCaP_DHT_DMSO_6h | 561 | 11 | 1137 | 140 | 0 | 106 | 333 | TRIT1,MYCL |
| SE_02_145900228 | chr1:39865888-39878925 |
Sample_02_1459 | Pancreas | THP1+PANC1_shCTCF | 228 | 1 | 347 | 40 | 0 | 7 | 0 | TRIT1,MYCL |
| SE_02_012400635 | chr1:39870051-39913070 |
Sample_02_0124 | Embryo | Embryonic-stem-cells_Naive | 635 | 7 | 1024 | 107 | 3 | 257 | 1140 | TRIT1,MYCL1,MFSD2A |
| SE_02_145800219 | chr1:39871732-39881100 |
Sample_02_1458 | Pancreas | THP1+PANC1_shNC | 219 | 1 | 231 | 30 | 0 | 8 | 0 | TRIT1,MYCL |
| SE_02_003800687 | chr1:39872071-39902590 |
Sample_02_0038 | Embryo | DE | 687 | 5 | 711 | 78 | 2 | 253 | 1140 | TRIT1,MYCL1 |
| SE_02_131300356 | chr1:39874775-39908753 |
Sample_02_1313 | Brain | hMGLs_CD33_SNP | 356 | 11 | 799 | 87 | 3 | 257 | 1140 | MYCL,TRIT1,MFSD2A |
| SE_02_128200005 | chr1:39875181-39879163 |
Sample_02_1282 | Lung | NCI-H1092_p8-15 | 5 | 5 | 89 | 7 | 0 | 7 | 0 | TRIT1,MYCL |
| SE_02_010100661 | chr1:39875327-39908754 |
Sample_02_0101 | Peripheral blood | Macrophages_GM-CSF_72h_IFN-y | 661 | 5 | 784 | 86 | 3 | 257 | 1140 | TRIT1,MYCL1,MFSD2A |
| SE_02_095600746 | chr1:39875755-39899971 |
Sample_02_0956 | Brain | IDH1_2658 | 746 | 8 | 579 | 72 | 2 | 155 | 605 | MYCL,TRIT1 |
| SE_02_006500574 | chr1:39876956-39900234 |
Sample_02_0065 | Embryo | KO2-Late_G1 | 574 | 3 | 557 | 69 | 2 | 154 | 646 | TRIT1,MYCL1 |
| SE_02_069500191 | chr1:39876958-39881639 |
Sample_02_0695 | Lung | NCI-H889_no infection | 191 | 3 | 132 | 22 | 0 | 7 | 0 | TRIT1,MYCL |
| SE_02_128600002 | chr1:39877088-39900213 |
Sample_02_1286 | Lung | NCI-H378_p8-15 | 2 | 8 | 555 | 69 | 2 | 154 | 646 | MYCL,TRIT1 |
| SE_02_003900394 | chr1:39877333-39902135 |
Sample_02_0039 | Embryo | AFG | 394 | 7 | 590 | 69 | 2 | 241 | 1118 | TRIT1,MYCL1 |
| SE_00_001000146 | chr1:39877342-39901986 |
Sample_00_0010 | Embryo | endodermal-cell | 146 | 4 | 587 | 69 | 2 | 226 | 1076 | TRIT1,MYCL1 |
| SE_02_123900434 | chr1:39877558-39901744 |
Sample_02_1239 | Skin | Waga_virus_positive | 434 | 8 | 574 | 69 | 2 | 210 | 1010 | MYCL,TRIT1 |
| SE_02_003601040 | chr1:39878127-39902866 |
Sample_02_0036 | Embryo | H7 | 1040 | 6 | 581 | 68 | 2 | 247 | 1140 | TRIT1,MYCL1 |
| SE_02_103300794 | chr1:39880550-39902474 |
Sample_02_1033 | Haematopoietic and lymphoid tissue bone marrow | K562 | 794 | 4 | 505 | 51 | 2 | 244 | 1140 | MYCL,TRIT1,BMP8B,RLF,CAP1 |
| SE_01_005000099 | chr1:39881105-39900160 |
Sample_01_0050 | Embryo | neural-cell | 99 | 3 | 439 | 49 | 2 | 147 | 640 | TRIT1,MYCL1 |
| SE_02_006400478 | chr1:39882682-39900993 |
Sample_02_0064 | Embryo | DN-Early_G1 | 478 | 4 | 409 | 42 | 2 | 173 | 797 | TRIT1,MYCL1 |
| SE_02_004600677 | chr1:39882924-39902586 |
Sample_02_0046 | Embryo endodermal | CyT49_ES_D10 | 677 | 6 | 429 | 42 | 2 | 242 | 1140 | TRIT1,MYCL1 |
| SE_02_093100618 | chr1:39885798-39899672 |
Sample_02_0931 | Embryo | H9 UTXKO | 618 | 4 | 294 | 33 | 2 | 136 | 459 | MYCL,TRIT1 |
| SE_02_093300348 | chr1:39886039-39899215 |
Sample_02_0933 | Embryo | H7 UTXKO | 348 | 3 | 276 | 32 | 2 | 125 | 435 | MYCL,TRIT1 |
Genomic distribution of SEs associated with TRIT1