SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000109689
Gene: STIM2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr4:26857601-27025381 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_154400430 chr4:26738887-26769232 Sample_02_1544 Gastrointestinal Stromal GIST-882 430 11 679 19 0 100 158 TBC1D19,STIM2
SE_02_154600105 chr4:26740466-26769340 Sample_02_1546 Gastrointestinal Stromal GIST-430/654 105 16 642 16 0 96 142 TBC1D19,STIM2
SE_02_062900133 chr4:26741398-26807690 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 133 14 1582 33 2 182 142 TBC1D19,STIM2
SE_02_154300177 chr4:26741809-26769274 Sample_02_1543 Gastrointestinal Stromal GIST-48 177 10 613 16 0 95 142 TBC1D19,STIM2
SE_02_154200413 chr4:26748510-26768382 Sample_02_1542 Gastrointestinal Stromal GIST-T1 413 12 444 12 0 80 105 TBC1D19,STIM2
SE_02_088500136 chr4:26775151-26839586 Sample_02_0885 Blood NALM6_2 136 13 1733 42 3 202 0 STIM2
SE_02_064801173 chr4:26778047-26789253 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1173 8 284 7 1 33 0 STIM2
SE_02_112100905 chr4:26778444-26789823 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 905 7 280 7 1 33 0 STIM2
SE_02_065201155 chr4:26778518-26789258 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1155 7 270 7 1 33 0 STIM2
SE_02_042000456 chr4:26779209-26822728 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 456 7 1164 20 3 132 0 STIM2
SE_02_155500188 chr4:26779483-26827592 Sample_02_1555 Gastrointestinal Stromal GIST-4_KIT e9 188 15 1295 25 3 150 0 STIM2
SE_02_143201381 chr4:26779840-26841492 Sample_02_1432 Bone A673 STAG2 WT 1381 18 1672 46 3 206 0 STIM2
SE_02_109700109 chr4:26779997-26868231 Sample_02_1097 Haematopoietic and lymphoid tissue 697 109 41 2363 134 3 320 265 STIM2
SE_02_130300158 chr4:26780051-26892859 Sample_02_1303 Lymphoma RL_tazemetostat 158 36 3040 183 8 354 265 STIM2
SE_02_073900272 chr4:26780260-26840631 Sample_02_0739 Blood Nalm6 272 18 1635 42 3 202 0 STIM2
SE_02_125200038 chr4:26780386-26860571 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 38 26 2146 119 3 267 17 STIM2
SE_02_156400175 chr4:26785982-26806611 Sample_02_1564 Gastrointestinal Stromal GIST-430 175 6 531 5 1 48 0 STIM2
SE_02_057300042 chr4:26786111-26840012 Sample_02_0573 Blood Nalm6_1 42 16 1468 35 2 179 0 STIM2
SE_02_074000836 chr4:26787370-26822967 Sample_02_0740 Muscle RH3 836 8 969 15 2 107 0 STIM2
SE_02_036200036 chr4:26802138-26842420 Sample_02_0362 Haematopoietic and lymphoid tissue REH 36 7 1135 41 1 156 0 STIM2
SE_02_105900957 chr4:26802377-26841245 Sample_02_1059 Bone A673_WT 957 7 1087 35 1 155 0 STIM2
SE_02_147300961 chr4:26802377-26841245 Sample_02_1473 Bone A-673 961 7 1087 35 1 155 0 STIM2
SE_02_125100079 chr4:26802453-26839821 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 79 20 1038 30 1 149 0 STIM2
SE_02_124900066 chr4:26802588-26841171 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 66 21 1081 34 1 155 0 STIM2
SE_02_125000070 chr4:26802747-26839874 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 70 14 1032 30 1 149 0 STIM2
SE_02_075800027 chr4:26802764-26886807 Sample_02_0758 Peripheral blood REH 27 24 2253 156 5 304 265 STIM2
SE_02_105800835 chr4:26802895-26841269 Sample_02_1058 Bone A673_SA2 Rescue 835 11 1073 35 1 155 0 STIM2
SE_02_078100263 chr4:26803507-26908806 Sample_02_0781 Lymphoma Pfeiffer_DMSO 263 36 2832 204 8 305 265 STIM2
SE_02_130400216 chr4:26806049-26916936 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 216 38 2968 225 9 323 265 STIM2
SE_02_106500277 chr4:26806058-26832771 Sample_02_1065 Lymphoma KARPAS-422_DMSO_8d 277 4 748 18 1 98 0 STIM2
SE_02_062900688 chr4:26821600-26843963 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 688 5 626 37 0 90 0 STIM2
SE_02_028800583 chr4:26822043-26833410 Sample_02_0288 Tonsil CB5_H3K27Ac 583 2 318 10 0 49 0 STIM2
SE_02_121800219 chr4:26822202-26860556 Sample_02_1218 Bone marrow Daudi 219 13 1028 100 0 149 9 STIM2
SE_01_005500389 chr4:26825085-26841385 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 389 3 447 22 0 69 0 STIM2
SE_02_011900330 chr4:26825783-26842339 Sample_02_0119 Haematopoietic and lymphoid tissue PFEIFFER 330 11 462 25 0 70 0 STIM2
SE_02_123700883 chr4:26843756-26860579 Sample_02_1237 Skin MKL2_virus_positive 883 4 419 64 0 61 18 STIM2
SE_02_023200559 chr4:26848809-26890190 Sample_02_0232 Tonsil ILC3 559 10 1112 103 4 140 265 STIM2
SE_02_082601151 chr4:26848875-26887155 Sample_02_0826 Stomach gastric tumor 1151 14 1013 96 4 140 265 STIM2
SE_02_123600306 chr4:26853597-26860575 Sample_02_1236 Skin MKL1_virus_positive 306 4 183 27 0 40 18 STIM2
SE_02_064801156 chr4:26853619-26863261 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1156 4 253 35 0 77 265 STIM2
SE_02_064701378 chr4:26853643-26862056 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 1378 3 231 33 0 71 265 STIM2
SE_02_085700859 chr4:26854405-26896021 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 859 7 1130 93 6 127 265 STIM2
SE_02_023400477 chr4:26855707-26917418 Sample_02_0234 Tonsil Th17 477 14 1604 132 8 158 265 STIM2
SE_00_000800343 chr4:26856279-26888298 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 343 4 825 62 4 122 265 STIM2
SE_01_008501161 chr4:26856395-26887656 Sample_01_0085 Stomach stomach 1161 4 802 61 4 122 265 STIM2
SE_01_008400604 chr4:26856422-26893291 Sample_01_0084 Spleen spleen 604 9 995 78 5 122 265 STIM2
SE_00_004400255 chr4:26856528-26893854 Sample_00_0044 Cord blood T-cell 255 8 1007 79 5 122 265 STIM2
SE_02_155600661 chr4:26856545-26865806 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 661 3 239 26 0 81 265 STIM2
SE_00_000700456 chr4:26856549-26888047 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 456 5 812 62 4 122 265 STIM2
SE_01_002000335 chr4:26856575-26894077 Sample_01_0020 Blood B-cell 335 7 1013 80 5 122 265 STIM2
SE_02_023100065 chr4:26856576-26918072 Sample_02_0231 Tonsil ILC1 65 12 1603 131 8 158 265 STIM2
SE_00_003900643 chr4:26856587-26868466 Sample_00_0039 Spleen spleen_3y 643 3 308 28 0 93 265 STIM2,STI2
SE_00_002700245 chr4:26856592-26893354 Sample_00_0027 Blood natural-killer-cell 245 7 992 78 5 122 265 STIM2
SE_02_013100884 chr4:26856607-26890145 Sample_02_0131 Lung 1015_PT 884 8 883 66 4 122 265 STIM2
SE_00_000900277 chr4:26856612-26893666 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 277 7 1000 78 5 122 265 STIM2
SE_02_013200913 chr4:26856628-26890597 Sample_02_0132 Lung 1015_CL 913 9 894 68 4 122 265 STIM2
SE_01_007901038 chr4:26856669-26887820 Sample_01_0079 Peyers patch Peyers-patch 1038 5 802 62 4 122 265 STIM2
SE_02_036200598 chr4:26856729-26867114 Sample_02_0362 Haematopoietic and lymphoid tissue REH 598 1 271 26 0 81 265 STIM2
SE_02_155400384 chr4:26856745-26886911 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 384 10 774 58 4 122 265 STIM2
SE_02_023300438 chr4:26856747-26887946 Sample_02_0233 Tonsil Th1 438 7 803 62 4 122 265 STIM2
SE_00_004000593 chr4:26856776-26886996 Sample_00_0040 Spleen spleen_30y 593 8 776 58 4 121 265 STIM2,STI2
SE_02_073900958 chr4:26856783-26869993 Sample_02_0739 Blood Nalm6 958 6 347 29 0 94 265 STIM2
SE_02_062900603 chr4:26856787-26866437 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 603 2 250 26 0 80 265 STIM2
SE_02_061700114 chr4:26856801-26887687 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 114 4 795 61 4 121 265 STIM2
SE_02_045500551 chr4:26856805-26888060 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 551 10 808 62 4 121 265 STIM2
SE_00_005500806 chr4:26856809-26887039 Sample_00_0055 Spleen spleen 34y 806 7 777 59 4 121 265 STIM2
SE_01_010401098 chr4:26856826-26868128 Sample_01_0104 Lung upper lobe of left lung 1098 2 297 27 0 87 265 STIM2
SE_02_045400662 chr4:26856830-26888225 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 662 10 811 62 4 121 265 STIM2
SE_02_155900615 chr4:26856838-26884779 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 615 11 726 54 4 119 265 STIM2
SE_02_081601202 chr4:26856839-26886813 Sample_02_0816 Ovary Clear cell ovarian cancer 1202 11 771 58 4 121 265 STIM2
SE_02_070900753 chr4:26856845-26865904 Sample_02_0709 Pancreas hT85_organoid 753 3 236 26 0 80 265 STIM2
SE_02_002600290 chr4:26856856-26887719 Sample_02_0026 Blood CD4donorE 290 9 796 62 4 121 265 STIM2
SE_02_044500152 chr4:26856856-26942530 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 152 32 2114 164 10 170 291 STIM2
SE_02_014800154 chr4:26856869-26887791 Sample_02_0148 Blood CD8_T_cells 154 6 797 62 4 121 265 STIM2
SE_02_061200554 chr4:26856882-26887066 Sample_02_0612 Liposarcoma DDLPS_T2 554 11 775 58 4 121 265 STIM2
SE_02_064501186 chr4:26856898-26863195 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1186 4 159 19 0 70 265 STIM2
SE_02_115200428 chr4:26856929-26888018 Sample_02_1152 Lymphoma RL_WT_gRNA1 428 7 805 61 4 120 265 STIM2
SE_02_045600585 chr4:26856947-26888745 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 585 10 823 63 4 120 265 STIM2
SE_02_076600935 chr4:26856949-26879240 Sample_02_0766 Ovary PEO1 935 14 588 42 0 111 265 STIM2
SE_02_005700555 chr4:26856951-26879635 Sample_02_0057 Mammary gland vHMEC 555 5 601 42 0 111 265 STIM2
SE_02_154400227 chr4:26856956-26868683 Sample_02_1544 Gastrointestinal Stromal GIST-882 227 3 304 27 0 91 265 STIM2
SE_02_156001240 chr4:26856965-26886920 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 1240 12 772 57 4 120 265 STIM2
SE_02_002200154 chr4:26856968-26887713 Sample_02_0022 Blood CD8donorA 154 10 795 61 4 120 265 STIM2
SE_02_049401270 chr4:26856970-26860567 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 1270 2 89 11 0 33 15 STIM2
SE_02_115300455 chr4:26856978-26898273 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 455 9 1117 87 6 123 265 STIM2
SE_02_057300535 chr4:26856982-26869373 Sample_02_0573 Blood Nalm6_1 535 4 327 28 0 93 265 STIM2
SE_02_106900433 chr4:26856983-26887607 Sample_02_1069 Bone marrow Bone marrow aspirate 433 10 790 60 4 120 265 STIM2
SE_02_151501005 chr4:26857002-26879499 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 1005 8 593 41 0 111 265 STIM2
SE_02_059300190 chr4:26857003-26887659 Sample_02_0593 Fetal spleenocytes fetal naive T cells 190 7 790 59 4 120 265 STIM2
SE_02_071000864 chr4:26857005-26868369 Sample_02_0710 Pancreas hN34_organoid 864 5 298 25 0 89 265 STIM2
SE_02_155700226 chr4:26857042-26868409 Sample_02_1557 Gastrointestinal Stromal GIST-6_KIT e11/16 226 8 298 25 0 89 265 STIM2
SE_02_088001234 chr4:26857042-26879858 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1234 4 604 41 0 112 265 STIM2
SE_02_097800644 chr4:26857081-26865810 Sample_02_0978 Brain 2168_IDH1 644 5 231 24 0 79 265 STIM2
SE_02_143000792 chr4:26857091-26886901 Sample_02_1430 Blood Kasumi-3_mock-infected 792 5 770 56 4 120 265 STIM2
SE_02_065000820 chr4:26857121-26863387 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 820 4 159 18 0 71 265 STIM2
SE_02_156100084 chr4:26857140-26868047 Sample_02_1561 Gastrointestinal Stromal GIST-10_PDGFRA e1 84 2 289 25 0 86 265 STIM2
SE_02_146001136 chr4:26857144-26886556 Sample_02_1460 Blood Mutz-3 1136 5 759 56 4 120 265 STIM2
SE_02_005600793 chr4:26857183-26880114 Sample_02_0056 Mammary gland HMEC 793 6 614 41 0 112 265 STIM2
SE_02_149600324 chr4:26857228-26888160 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 324 11 805 60 4 120 265 STIM2
SE_02_141001445 chr4:26857269-26879441 Sample_02_1410 Brain GSC6 1445 4 587 41 0 111 265 STIM2
SE_02_096500572 chr4:26857360-26869364 Sample_02_0965 Brain H3.3K27M_HSJ031-C3-Rx_cells 572 4 318 26 0 93 265 STIM2
SE_02_156300190 chr4:26857808-26865621 Sample_02_1563 Gastrointestinal Stromal GIST-12_SDHC deletion 190 4 207 19 0 63 265 STIM2
SE_02_154300105 chr4:26857811-26869174 Sample_02_1543 Gastrointestinal Stromal GIST-48 105 2 301 23 0 77 265 STIM2
SE_02_156400100 chr4:26858003-26884769 Sample_02_1564 Gastrointestinal Stromal GIST-430 100 13 696 48 4 100 265 STIM2
SE_02_154900754 chr4:26858204-26880151 Sample_02_1549 Gastrointestinal Stromal GIST-430B 754 10 590 37 0 94 265 STIM2
SE_02_154600036 chr4:26861853-26917385 Sample_02_1546 Gastrointestinal Stromal GIST-430/654 36 15 1449 111 8 94 0 STIM2
SE_02_002400392 chr4:26872655-26913140 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 392 14 1063 86 7 40 0 STIM2
SE_02_002300401 chr4:26872880-26887589 Sample_02_0023 Blood CD8donorC 401 9 362 26 4 22 0 STIM2
SE_00_000500501 chr4:26881668-26888499 Sample_00_0005 Blood B-cell 501 2 172 18 4 6 0 STIM2
SE_02_028800532 chr4:26881800-26887074 Sample_02_0288 Tonsil CB5_H3K27Ac 532 1 129 12 4 6 0 STIM2
SE_02_002500322 chr4:26881937-26888070 Sample_02_0025 Blood CD19donorA 322 4 158 15 4 5 0 STIM2
SE_02_141000633 chr4:26959622-27010461 Sample_02_1410 Brain GSC6 633 9 1282 101 2 116 225 STIM2
SE_02_044500991 chr4:26963877-27013709 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 991 21 1253 99 1 108 225 STIM2
SE_01_002000195 chr4:26976701-26996220 Sample_01_0020 Blood B-cell 195 3 477 33 0 40 33 STIM2
SE_02_002500209 chr4:26976770-26995898 Sample_02_0025 Blood CD19donorA 209 5 469 33 0 40 33 STIM2
SE_00_000500440 chr4:26978219-26996116 Sample_00_0005 Blood B-cell 440 3 433 29 0 37 33 STIM2
SE_02_021300756 chr4:26984579-27010615 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 756 4 612 46 1 86 225 STIM2
SE_02_154400369 chr4:26985245-27012059 Sample_02_1544 Gastrointestinal Stromal GIST-882 369 14 629 49 1 82 225 STIM2
SE_02_154600089 chr4:26985563-27020411 Sample_02_1546 Gastrointestinal Stromal GIST-430/654 89 15 790 60 1 82 316 STIM2
SE_02_028800577 chr4:26990900-27007666 Sample_02_0288 Tonsil CB5_H3K27Ac 577 2 388 26 1 48 133 STIM2
SE_02_154300172 chr4:26994193-27013642 Sample_02_1543 Gastrointestinal Stromal GIST-48 172 6 450 35 1 62 225 STIM2
SE_02_003601460 chr4:27121254-27127908 Sample_02_0036 Embryo H7 1460 2 210 4 1 22 0 STIM2
Genomic distribution of SEs associated with STIM2
Genome Browser

The strength of the tissue affected by the gene

Expression of STIM2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)