Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000089057
Gene: SLC23A2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr20:4852356-5010293 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_006900060 chr20:4856437-5002276 Sample_01_0069 Adrenal gland adrenal-gland 60 30 4113 217 5 207 1372 SLC23A2,RASSF2
SE_02_108300008 chr20:4858507-5002487 Sample_02_1083 Macula macula 8 37 4053 217 5 192 1244 SLC23A2,RASSF2
SE_02_108200028 chr20:4858610-5002173 Sample_02_1082 Retina retina 28 74 4038 215 5 192 1244 SLC23A2,RASSF2,PRNP,PCNA
SE_00_005100054 chr20:4889167-5004931 Sample_00_0051 Adrenal gland adrenal gland 30y 54 101 3271 167 4 95 522 SLC23A2
SE_02_155400293 chr20:4893497-4950614 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 293 17 1597 67 2 43 299 SLC23A2
SE_02_008600932 chr20:4895755-4951894 Sample_02_0086 Pancreas CAPAN1 932 5 1587 68 2 43 299 SLC23A2
SE_02_063000283 chr20:4903853-4950004 Sample_02_0630 Gastrointestinal Stromal GIST-T1_Imatinib 283 13 1277 53 2 13 158 SLC23A2
SE_02_063100266 chr20:4904092-4949983 Sample_02_0631 Gastrointestinal Stromal GIST-T1_JQ1 266 16 1268 53 2 12 158 SLC23A2
SE_02_044500555 chr20:4910452-4999375 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 555 33 2516 122 4 38 218 SLC23A2
SE_02_078100118 chr20:4913093-5011048 Sample_02_0781 Lymphoma Pfeiffer_DMSO 118 28 2731 132 4 69 372 SLC23A2
SE_02_156400149 chr20:4916084-4950358 Sample_02_1564 Gastrointestinal Stromal GIST-430 149 17 959 36 2 14 69 SLC23A2
SE_02_004700816 chr20:4916700-4981810 Sample_02_0047 Pancreatic endoderm IIDP/donor790 816 12 1817 70 2 31 129 SLC23A2
SE_02_154900244 chr20:4916767-4952143 Sample_02_1549 Gastrointestinal Stromal GIST-430B 244 18 1000 38 2 14 69 SLC23A2
SE_02_003300648 chr20:4916997-4981795 Sample_02_0033 Pancreas pancreatic-islets-F 648 13 1811 70 2 31 129 SLC23A2
SE_02_062900313 chr20:4917092-4950032 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 313 12 921 34 2 7 69 SLC23A2
SE_02_156500267 chr20:4917121-4950556 Sample_02_1565 Gastrointestinal Stromal Gastrointestinal stromal tumor 267 8 930 35 2 14 69 SLC23A2
SE_02_056901069 chr20:4917123-4955248 Sample_02_0569 Periodontal ligament mesenchymal stem cell 1069 17 1061 39 2 14 69 SLC23A2
SE_00_000300043 chr20:4918167-4998936 Sample_00_0003 Adrenal gland adrenal-gland_97d 43 19 2282 111 3 33 129 SLC23A2
SE_01_010600027 chr20:4918401-4999314 Sample_01_0106 Adrenal gland adrenal gland 54y 27 25 2289 112 4 33 129 SLC23A2
SE_02_154200421 chr20:4921731-4949999 Sample_02_1542 Gastrointestinal Stromal GIST-T1 421 10 797 27 2 6 69 SLC23A2
SE_02_045100991 chr20:4924513-4951962 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 991 8 791 30 2 14 69 SLC23A2
SE_00_001500599 chr20:4925588-4951993 Sample_00_0015 Lung IMR-90 599 7 759 28 2 14 69 SLC23A2
SE_02_017201150 chr20:4925592-4978749 Sample_02_0172 Lung IMR-90_quiescent 1150 12 1502 56 2 30 129 SLC23A2
SE_01_010800021 chr20:4925744-4990362 Sample_01_0108 Adrenal gland adrenal gland_37y 21 19 1860 76 2 31 129 SLC23A2
SE_02_049901329 chr20:4926037-4974835 Sample_02_0499 Fetal lung IMR90 IR Senescence 1329 12 1385 52 2 27 129 SLC23A2,RASSF2
SE_02_078400423 chr20:4929408-5000254 Sample_02_0784 Blood OSU-CLL 423 11 2016 99 4 36 129 SLC23A2
SE_02_021100640 chr20:4936563-4979050 Sample_02_0211 Lung MRC-5_NFD_1DPT 640 9 1196 36 2 26 60 SLC23A2
SE_02_130200181 chr20:4937598-5001952 Sample_02_1302 Lymphoma RL DMSO 181 26 1804 86 4 55 223 SLC23A2
SE_02_130400079 chr20:4939635-5012646 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 79 22 2051 96 3 65 290 SLC23A2
SE_02_032000234 chr20:4939729-5001309 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 234 10 1739 85 3 45 92 SLC23A2
SE_02_032100181 chr20:4939863-5002411 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 181 6 1760 89 3 55 223 SLC23A2
SE_02_142900613 chr20:4941278-5001269 Sample_02_1429 Blood GM12878_WT 613 19 1690 85 3 41 79 SLC23A2,MCM8
SE_02_115500216 chr20:4941353-5002151 Sample_02_1155 Lymphoma RL_R1446C_gRNA1_KDAC005 216 10 1707 89 3 55 223 SLC23A2
SE_02_130300205 chr20:4941539-5001418 Sample_02_1303 Lymphoma RL_tazemetostat 205 24 1683 85 3 53 126 SLC23A2
SE_02_115200151 chr20:4941625-5001928 Sample_02_1152 Lymphoma RL_WT_gRNA1 151 11 1688 86 3 55 223 SLC23A2
SE_02_087801310 chr20:4941796-4998406 Sample_02_0878 Ovary SVOG3e cells_noDox_control 1310 8 1603 76 2 29 60 SLC23A2
SE_02_088100755 chr20:4941815-4999546 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 755 9 1635 80 3 29 60 SLC23A2
SE_02_115300228 chr20:4941836-5001926 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 228 9 1686 86 3 55 223 SLC23A2
SE_02_056100072 chr20:4941863-4978745 Sample_02_0561 Lung A549_1 72 17 1037 33 1 26 60 SLC23A2
SE_02_087901584 chr20:4941895-4999185 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 1584 12 1625 78 2 29 60 SLC23A2
SE_02_088000786 chr20:4941919-4999270 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 786 10 1629 80 3 29 60 SLC23A2
SE_02_115400220 chr20:4941921-5001897 Sample_02_1154 Lymphoma RL_R1446C_gRNA1_KDAC001 220 13 1683 86 3 55 223 SLC23A2
SE_02_088300896 chr20:4941923-4999369 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 896 11 1632 80 3 29 60 SLC23A2
SE_02_088200958 chr20:4941959-4999277 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 958 10 1629 80 3 29 60 SLC23A2
SE_02_077101094 chr20:4942005-4977514 Sample_02_0771 Ovary OVCA429_shGRHL2 1094 10 1003 33 1 23 60 SLC23A2
SE_04_000900542 chr20:4942028-4988711 Sample_04_0009 Lung A549 542 8 1366 50 1 27 60 SLC23A2
SE_02_056200059 chr20:4942042-4975452 Sample_02_0562 Lung A549_Dex-treated 59 14 949 31 1 23 60 SLC23A2
SE_02_011900131 chr20:4942702-4999612 Sample_02_0119 Haematopoietic and lymphoid tissue PFEIFFER 131 70 1614 80 2 29 60 SLC23A2
SE_02_076201157 chr20:4944490-4999290 Sample_02_0762 Podocyte podocyte_CTL 1157 15 1554 80 2 29 60 SLC23A2
SE_02_104902126 chr20:4945388-5008501 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 2126 20 1758 94 2 65 223 SLC23A2
SE_02_104301616 chr20:4947012-5004990 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1616 18 1627 92 2 60 223 SLC23A2
SE_02_032500379 chr20:4947126-4979229 Sample_02_0325 Liver hepatocytes_d1 379 9 899 34 0 25 60 SLC23A2
SE_02_032700424 chr20:4947253-4979102 Sample_02_0327 Liver hepatocytes_d6 424 8 888 34 0 25 60 SLC23A2
SE_00_001400419 chr20:4947491-4979156 Sample_00_0014 Heart left ventricle heart-left-ventricle 419 5 886 34 0 24 60 SLC23A2
SE_02_032600590 chr20:4947551-4978915 Sample_02_0326 Liver hepatocytes_d3 590 6 880 33 0 24 60 SLC23A2
SE_01_008200962 chr20:4947687-4979099 Sample_01_0082 Right lobe of liver right-lobe-of-liver 962 8 880 34 0 24 60 SLC23A2
SE_02_099900278 chr20:4949729-5001153 Sample_02_0999 Lymphoma OCI-LY1_966 278 27 1458 84 2 39 60 SLC23A2
SE_02_057500204 chr20:4950318-4999458 Sample_02_0575 Blood MOLM13_sgLKB1e2 204 13 1398 78 2 19 60 SLC23A2
SE_02_152300197 chr20:4955852-4974780 Sample_02_1523 Lung A549 DMSO 197 5 547 25 0 12 60 SLC23A2
SE_01_006700375 chr20:4956070-5001314 Sample_01_0067 Peritoneal effusion: derived from metastatic site: peritoneal cavity SUDHL6 375 6 1283 79 2 33 92 SLC23A2
SE_01_005300146 chr20:4956234-5001034 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 146 7 1275 79 2 29 60 SLC23A2
SE_02_025500537 chr20:4956242-4975624 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 537 6 557 25 0 11 60 SLC23A2
SE_02_057400286 chr20:4956448-4999340 Sample_02_0574 Blood MOLM-13_sgNeg2 286 12 1234 74 2 17 60 SLC23A2
SE_02_099500298 chr20:4956451-4999108 Sample_02_0995 Blood MOLM-13_empty vector 298 17 1226 72 1 17 60 SLC23A2
SE_02_058200715 chr20:4956468-4999278 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 715 11 1232 74 2 17 60 SLC23A2
SE_02_057800186 chr20:4956470-4999562 Sample_02_0578 Blood MOLM-13_sgSIK3e4 186 17 1235 74 2 17 60 SLC23A2
SE_02_058100666 chr20:4956484-4999310 Sample_02_0581 Blood MOLM13_empty_HG 666 9 1233 74 2 17 60 SLC23A2
SE_01_009600491 chr20:4956485-4995266 Sample_01_0096 B-cell lymphoma DOHH2 491 9 1129 67 1 17 60 SLC23A2
SE_02_099400258 chr20:4956505-4999168 Sample_02_0994 Blood MOLM13_SIK3TQ 258 16 1226 72 1 17 60 SLC23A2
SE_02_099300305 chr20:4956520-4978766 Sample_02_0993 Blood MOLM-13_empty 305 13 636 27 0 14 60 SLC23A2
SE_02_057700692 chr20:4956536-4999222 Sample_02_0577 Blood MOLM13_empty 692 8 1230 72 1 17 60 SLC23A2
SE_02_109800242 chr20:4956550-5008772 Sample_02_1098 Blood THP1_DMSO_noPMA 242 12 1468 88 2 53 223 SLC23A2
SE_02_099800276 chr20:4957978-4999484 Sample_02_0998 Lymphoma OCI-LY1_DMSO 276 31 1183 74 2 17 60 SLC23A2
SE_02_133100916 chr20:4958892-4987183 Sample_02_1331 Blood Molm13_CTRL 916 9 839 39 0 15 60 SLC23A2
SE_02_028600663 chr20:4959200-4974609 Sample_02_0286 Liver HuH7_IL-1alpha_1h 663 2 457 25 0 11 60 SLC23A2
SE_02_046400245 chr20:4959596-4974285 Sample_02_0464 Bone marrow MOLM-13 245 8 437 24 0 11 60 SLC23A2
SE_02_103500508 chr20:4965694-5037735 Sample_02_1035 Mammary gland HCC70_Vehicle 508 22 1998 102 2 53 290 SLC23A2
SE_02_073200399 chr20:4971630-4999659 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 399 8 795 56 2 7 0 SLC23A2
SE_02_073300406 chr20:4971657-4999542 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 406 8 789 56 2 7 0 SLC23A2
SE_02_072900436 chr20:4971680-4999399 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 436 6 789 56 2 7 0 SLC23A2
SE_02_073000238 chr20:4971746-5000314 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 238 5 806 60 2 10 0 SLC23A2
SE_02_028800472 chr20:4971768-4999793 Sample_02_0288 Tonsil CB5_H3K27Ac 472 4 792 57 2 7 0 SLC23A2
SE_02_073100216 chr20:4971776-5001517 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 216 4 832 61 2 33 89 SLC23A2
SE_02_011800276 chr20:4971839-4991560 Sample_02_0118 Haematopoietic and lymphoid tissue MINO 276 2 592 36 0 5 0 SLC23A2
SE_02_072800488 chr20:4971871-4999715 Sample_02_0728 Lymphoma I10_Mantle cell lymphoma tissue_DMSO 488 8 790 56 2 7 0 SLC23A2
SE_02_085800702 chr20:4972541-5010845 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 702 7 1056 65 2 43 230 SLC23A2
SE_02_075000403 chr20:4972629-4994393 Sample_02_0750 Lymphoma Rec-1_GSI 403 10 635 40 1 7 0 SLC23A2
SE_02_075100626 chr20:4972675-4991732 Sample_02_0751 Lymphoma Rec-1_WO 626 5 569 31 0 5 0 SLC23A2
SE_02_148100783 chr20:4973313-5023740 Sample_02_1481 Bone MIC 783 9 1439 80 2 42 230 SLC23A2
SE_02_073600181 chr20:4978503-4999365 Sample_02_0736 Blood Pt24_leukemia cell_THZ1 181 11 606 47 2 3 0 SLC23A2
SE_02_147600575 chr20:4993706-5024701 Sample_02_1476 Bone EW-1 575 8 888 46 1 36 230 SLC23A2
SE_02_085800169 chr20:5023911-5082316 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 169 10 1677 172 5 35 161 PCNA-AS1,SLC23A2,PCNA,CDS2,TMEM230
SE_02_152200162 chr20:5023913-5081816 Sample_02_1522 Skin A375 RTKi 162 13 1662 168 5 32 161 PCNA-AS1,SLC23A2,PCNA,CDS2,TMEM230
SE_02_092900338 chr20:5028678-5090811 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 338 31 1812 213 5 39 161 PCNA-AS1,SLC23A2,PCNA,CDS2,TMEM230
SE_02_131500160 chr20:5030534-5092816 Sample_02_1315 Brain hMGLs_INPP5D SNP 160 17 1831 224 5 40 161 PCNA-AS1,SLC23A2,PCNA,CDS2,TMEM230
SE_02_131800124 chr20:5030923-5091401 Sample_02_1318 Brain hMGLs_SORL1-A528T 124 17 1772 218 5 39 161 PCNA-AS1,SLC23A2,PCNA,CDS2,TMEM230
SE_02_094200255 chr20:5056026-5067062 Sample_02_0942 Brain LN229 255 4 316 42 3 12 0 SLC23A2,TMEM230

Genomic distribution of SEs associated with SLC23A2

The strength of the tissue affected by the gene


Expression of SLC23A2