SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000132128
Gene: LRRC41 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:46261196-46303608 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_146700498 chr1:46262839-46308786 Sample_02_1467 Blood HUDEP-2_LRFKO 498 11 1074 50 3 236 1733 RAD54L,LRRC41,UQCRH,NSUN4,POMGNT1
SE_02_146600629 chr1:46263067-46308784 Sample_02_1466 Blood HUDEP-2_BCL11AKO 629 11 1068 50 3 236 1733 RAD54L,LRRC41,UQCRH,NSUN4,POMGNT1
SE_02_111200531 chr1:46269682-46318151 Sample_02_1112 T lymphocyte THP-6 T-ALL 531 14 1196 57 2 243 1870 RAD54L,LRRC41,UQCRH,NSUN4,POMGNT1
SE_02_103500161 chr1:46270062-46315473 Sample_02_1035 Mammary gland HCC70_Vehicle 161 18 1122 51 2 242 1797 RAD54L,LRRC41,UQCRH,NSUN4,POMGNT1
SE_02_074700284 chr1:46273505-46308652 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 284 17 848 35 2 216 1431 RAD54L,LRRC41,UQCRH,NSUN4
SE_02_051700435 chr1:46274757-46308738 Sample_02_0517 Esophagus TE5 435 11 814 35 2 200 1228 RAD54L,LRRC41,UQCRH,NSUN4
SE_02_050600445 chr1:46274757-46308739 Sample_02_0506 Esophagus TE5_1 445 10 814 35 2 200 1228 RAD54L,LRRC41,UQCRH,NSUN4
SE_02_074600203 chr1:46275682-46308625 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 203 10 790 34 1 200 1206 RAD54L,LRRC41,UQCRH,NSUN4
SE_02_038100610 chr1:46277079-46309378 Sample_02_0381 Heart purified cardiomyocyte WT 610 4 766 34 1 203 1245 UQCRH,LRRC41,RAD54L,NSUN4
SE_04_000200352 chr1:46278075-46309053 Sample_04_0002 Blood cold shocked K562 352 6 744 32 1 188 1152 RAD54L,LRRC41,UQCRH,NSUN4
SE_02_046600682 chr1:46278465-46310110 Sample_02_0466 Adipose visceral adipocytes 682 15 762 32 1 185 1166 RAD54L,LRRC41,UQCRH,NSUN4
SE_02_046500469 chr1:46279221-46312646 Sample_02_0465 Adipose subcutaneous adipocytes 469 18 817 40 1 168 1065 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_143200438 chr1:46279321-46308714 Sample_02_1432 Bone A673 STAG2 WT 438 10 712 30 1 155 901 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_138100345 chr1:46279357-46309830 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 345 12 737 32 1 158 949 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_143300439 chr1:46280312-46308843 Sample_02_1433 Bone A673 STAG2 null 439 10 694 30 1 149 780 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_012800425 chr1:46280888-46304454 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 425 6 593 23 1 133 711 UQCRH,LRRC41,RAD54L,NSUN4
SE_02_130000374 chr1:46281677-46308915 Sample_02_1300 Blood KARPAS-45 374 6 660 27 0 125 612 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_122900383 chr1:46282069-46310398 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 383 5 685 29 0 136 737 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_038200908 chr1:46282895-46309172 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 908 4 630 27 0 126 631 UQCRH,LRRC41,RAD54L,NSUN4
SE_02_158300577 chr1:46283601-46316547 Sample_02_1583 Fetal lung IMR90_empty_GM 577 16 824 45 0 135 768 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_103300126 chr1:46284107-46308959 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 126 4 592 25 0 124 618 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_049901112 chr1:46284226-46315645 Sample_02_0499 Fetal lung IMR90 IR Senescence 1112 8 778 40 0 135 750 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_145200471 chr1:46284418-46304376 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 471 4 489 20 0 120 612 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_145400551 chr1:46284420-46307987 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 551 4 557 25 0 124 612 UQCRH,LRRC41,NSUN4,RAD54L
SE_01_003900339 chr1:46284550-46306347 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 339 5 513 21 0 122 612 UQCRH,LRRC41,RAD54L,NSUN4
SE_02_145500313 chr1:46284564-46304889 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 313 3 489 20 0 122 612 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_084001202 chr1:46284707-46304272 Sample_02_0840 Embryo hNPCs_R1159Q/+ 1202 4 480 20 0 120 612 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_145100478 chr1:46285154-46304700 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 478 3 474 19 0 120 571 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_055500135 chr1:46285543-46309703 Sample_02_0555 Other HAP1_WT 135 4 570 26 0 121 549 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_108000651 chr1:46285553-46304408 Sample_02_1080 Muscle JR1 shCtrl 651 3 459 19 0 113 508 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_108400311 chr1:46285609-46309607 Sample_02_1084 Blood KBM7-derived near haploid cells 311 11 568 26 0 118 537 UQCRH,LRRC41,NSUN4,RAD54L
SE_01_009500558 chr1:46285715-46304327 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 558 3 451 19 0 107 479 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_061500629 chr1:46285771-46306155 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 629 4 481 20 0 109 470 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_131900145 chr1:46285863-46306147 Sample_02_1319 Connective Tissue HT1080_DDIT3 145 5 477 20 0 108 449 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_045201085 chr1:46286978-46315584 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 1085 6 717 38 0 98 462 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_077501980 chr1:46287101-46304659 Sample_02_0775 Pancreas EndoC-BH1_SE 1980 4 427 18 0 83 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_010700809 chr1:46287576-46305668 Sample_02_0107 Endometrium EEC16 809 2 425 16 0 85 324 UQCRH,LRRC41,RAD54L,NSUN4
SE_02_127901462 chr1:46287618-46316415 Sample_02_1279 Bone Mesenchymal stem cells 1462 5 712 39 0 98 466 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_055701040 chr1:46287830-46304348 Sample_02_0557 iPSCs WT hiPSC#1 1040 2 401 16 0 83 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_027400515 chr1:46287862-46304419 Sample_02_0274 Endometriosis hTERT_KD 515 2 402 16 0 83 324 UQCRH,LRRC41,RAD54L,NSUN4
SE_02_141600623 chr1:46287937-46316539 Sample_02_1416 Brain SF9402 623 7 709 40 0 98 480 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_064700784 chr1:46288012-46315812 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 784 4 687 37 0 98 462 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_137600895 chr1:46288145-46304344 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 895 3 396 15 0 83 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_064800798 chr1:46288165-46304332 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 798 3 396 15 0 83 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_137500742 chr1:46288169-46304321 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 742 5 395 15 0 83 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_064900671 chr1:46288201-46303325 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 671 3 370 15 0 72 213 LRRC41,UQCRH,NSUN4,RAD54L
SE_02_142800633 chr1:46288218-46304470 Sample_02_1428 Shoulder fibroblast_316 633 3 398 15 0 83 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_048001240 chr1:46288219-46315715 Sample_02_0480 Gingival epithelial HGEP 1240 7 683 35 0 98 462 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_132100804 chr1:46288254-46305288 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 804 2 407 15 0 85 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_065200804 chr1:46288329-46303645 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 804 3 380 15 0 80 255 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_076000446 chr1:46288351-46308043 Sample_02_0760 Ovary BIN-67_SMARCA4 446 4 465 20 0 87 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_113800767 chr1:46288374-46304847 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 767 2 400 15 0 85 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_132000670 chr1:46288415-46304986 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 670 3 402 15 0 85 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_095001224 chr1:46288424-46305315 Sample_02_0950 Umbilical vein HUVEC_WT 1224 3 405 15 0 85 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_084900171 chr1:46288427-46315589 Sample_02_0849 iPSCs iPSC_CBP-30 171 4 680 35 0 98 462 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_077101027 chr1:46288471-46308894 Sample_02_0771 Ovary OVCA429_shGRHL2 1027 8 486 20 0 87 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_138000643 chr1:46288501-46304226 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 643 2 391 15 0 83 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_113000400 chr1:46288562-46308500 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 400 6 473 20 0 87 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_142200119 chr1:46288582-46307579 Sample_02_1422 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_0h 119 3 453 19 0 85 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_050500425 chr1:46288851-46308876 Sample_02_0505 Esophagus KYSE70_1 425 5 479 19 0 86 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_051600428 chr1:46288851-46308876 Sample_02_0516 Esophagus KYSE70 428 6 479 19 0 86 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_137400660 chr1:46289159-46308793 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 660 3 466 19 0 86 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_147101016 chr1:46289313-46305146 Sample_02_1471 Blood Outgrowth Endothelia BOEC 1016 2 382 14 0 84 324 UQCRH,LRRC41,NSUN4,RAD54L
SE_02_147200319 chr1:46289336-46315676 Sample_02_1472 Fetal lung IMR-90 319 4 661 34 0 97 462 UQCRH,LRRC41,NSUN4,RAD54L
SE_01_006900961 chr1:46297490-46304642 Sample_01_0069 Adrenal gland adrenal-gland 961 2 154 5 0 81 307 UQCRH,LRRC41,RAD54L,NSUN4
SE_02_090401230 chr1:46297967-46307501 Sample_02_0904 Heart left ventricle_DCM_LV1028 1230 3 201 9 0 77 273 UQCRH,LRRC41,NSUN4
SE_01_007800967 chr1:46298113-46305476 Sample_01_0078 Heart left ventricle heart-left-ventricle 967 2 149 5 0 77 271 UQCRH,LRRC41,NSUN4
SE_02_140700535 chr1:46298115-46305643 Sample_02_1407 Prostate LNCaP_R1881 4h 535 4 154 5 0 77 271 UQCRH,LRRC41,NSUN4
SE_01_009801033 chr1:46298227-46305165 Sample_01_0098 Heart left ventricle_51y 1033 2 144 5 0 77 260 UQCRH,LRRC41,NSUN4
SE_02_085700928 chr1:46298440-46304795 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 928 2 134 5 0 75 228 UQCRH,LRRC41,NSUN4
SE_02_142700336 chr1:46298463-46304821 Sample_02_1427 Shoulder fibroblast_343 336 2 134 5 0 76 225 UQCRH,LRRC41,NSUN4
SE_02_091801213 chr1:46298505-46304563 Sample_02_0918 Heart left ventricle_DCM_LV1437 1213 2 132 5 0 74 223 UQCRH,LRRC41,NSUN4
SE_02_142600251 chr1:46298536-46304844 Sample_02_1426 Shoulder fibroblast_341 251 2 134 5 0 76 221 UQCRH,LRRC41,NSUN4
SE_02_034700349 chr1:46299958-46305565 Sample_02_0347 Blood AML11 349 1 120 5 0 76 218 UQCRH,LRRC41,NSUN4
SE_01_003700822 chr1:46300212-46304549 Sample_01_0037 Liver hepatocyte 822 1 104 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_097200612 chr1:46300224-46304773 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 612 1 105 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_134900362 chr1:46300269-46304908 Sample_02_1349 Leukophereses leukophereses_p411 362 1 107 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_010800709 chr1:46300333-46304581 Sample_02_0108 Fallopian tube FT246 709 1 103 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_009300528 chr1:46300345-46304284 Sample_02_0093 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_6 528 1 98 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_043500224 chr1:46300345-46305325 Sample_02_0435 Kidney HEK293A_WT-MEF2B_DMSO_6h 224 1 111 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_003900993 chr1:46300365-46304488 Sample_02_0039 Embryo AFG 993 1 101 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_043600135 chr1:46300401-46305759 Sample_02_0436 Kidney HEK293A_empty-vector_DMSO_6h 135 1 120 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_081800807 chr1:46300442-46306057 Sample_02_0818 Ovary High-grade serous ovarian cancer 807 1 124 6 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_036900640 chr1:46300497-46305583 Sample_02_0369 Skeletal muscle RD 640 1 109 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_037900640 chr1:46300497-46305583 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 640 1 109 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_118501049 chr1:46300501-46305132 Sample_02_1185 Brain GBM14 1049 1 100 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_120000587 chr1:46300506-46304774 Sample_02_1200 Brain GBM36 587 1 97 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_119700635 chr1:46300536-46304335 Sample_02_1197 Brain GBM33 635 1 92 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_081600950 chr1:46300554-46305699 Sample_02_0816 Ovary Clear cell ovarian cancer 950 2 110 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_119900498 chr1:46300571-46304882 Sample_02_1199 Brain GBM35 498 1 95 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_039500558 chr1:46300577-46306236 Sample_02_0395 Mammary gland BT-549 558 1 119 6 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_117400983 chr1:46300580-46304733 Sample_02_1174 Brain GBM02 983 2 94 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_119601071 chr1:46300591-46304441 Sample_02_1196 Brain GBM32 1071 1 90 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_01_010400991 chr1:46300619-46304460 Sample_01_0104 Lung upper lobe of left lung 991 1 91 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_121000373 chr1:46300631-46304318 Sample_02_1210 Brain GBM17 373 1 88 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_035900570 chr1:46300652-46305356 Sample_02_0359 Colon Colo741 570 1 101 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_119301384 chr1:46300659-46304356 Sample_02_1193 Brain GBM27 1384 1 89 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_095500425 chr1:46300666-46304138 Sample_02_0955 Brain IDH1_2469 425 1 86 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_096900872 chr1:46300666-46304337 Sample_02_0969 Brain H3.3K27M_PL637 872 1 89 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_070100473 chr1:46300672-46304603 Sample_02_0701 Bone David_TC32 473 1 93 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_097600511 chr1:46300681-46305286 Sample_02_0976 Brain H3.3K27M-KO_DIPGXIII-c5p5-Rx_R1_cells_h3k27ac 511 1 101 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_035500398 chr1:46300684-46306277 Sample_02_0355 Colon HCT15 398 1 120 6 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_096500556 chr1:46300689-46304319 Sample_02_0965 Brain H3.3K27M_HSJ031-C3-Rx_cells 556 1 88 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_083900998 chr1:46300692-46304400 Sample_02_0839 Embryo hNPCs_K755R/+ 998 1 90 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_01_011200170 chr1:46300694-46304348 Sample_01_0112 Embryonic kidney HEK293_encode 170 1 89 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_096200706 chr1:46300694-46305503 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 706 1 105 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_117600646 chr1:46300699-46304622 Sample_02_1176 Brain GBM04 646 1 93 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_01_004700195 chr1:46300702-46304652 Sample_01_0047 Embryo mid-neurogenesis-radial-glial-cells 195 1 93 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_132500288 chr1:46300703-46304305 Sample_02_1325 Hindbrain Hindbrain derived neural stem cells_NS19_H3.3K27M_WT 288 1 88 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_01_010901039 chr1:46300706-46305138 Sample_01_0109 Colon transverse colon_54y 1039 1 97 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_158400825 chr1:46300709-46304373 Sample_02_1584 Brain U87 GBM_Mock 825 1 89 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_110700696 chr1:46300710-46306151 Sample_02_1107 Brain SK-N-AS 696 2 118 6 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_061400791 chr1:46300715-46304390 Sample_02_0614 Liposarcoma MLPS_T2 791 1 89 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_01_006000113 chr1:46300720-46304617 Sample_01_0060 Embryo radial-glial-cell 113 1 92 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_064000316 chr1:46300734-46306134 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 316 1 118 6 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_098200597 chr1:46300737-46305212 Sample_02_0982 Brain H3.3K27M-KO_BT245-C2P3 597 1 98 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_142500267 chr1:46300753-46304613 Sample_02_1425 Shoulder fibroblast_384 267 1 91 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_074500535 chr1:46300754-46304377 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 535 1 88 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_01_011700773 chr1:46300757-46304378 Sample_01_0117 Lung fibroblast of lung 773 2 88 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_093100403 chr1:46300761-46304378 Sample_02_0931 Embryo H9 UTXKO 403 1 86 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_061000745 chr1:46300772-46305626 Sample_02_0610 Liposarcoma MLS 1765-92 745 1 102 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_085400421 chr1:46300774-46304809 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 421 1 91 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_096800351 chr1:46300783-46304841 Sample_02_0968 Brain H3.3K27M_pcGBM2p18_cells 351 1 91 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_049300921 chr1:46300785-46304698 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 921 1 89 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_147400392 chr1:46300799-46305236 Sample_02_1474 Bone CHLA-10 392 1 95 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_109500781 chr1:46300802-46305443 Sample_02_1095 Blood CD34 Erythroid cells_Don002 781 1 98 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_068500226 chr1:46300804-46304645 Sample_02_0685 Lung NCI-H1048_no infection 226 1 89 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_118900642 chr1:46300805-46304251 Sample_02_1189 Brain GBM22 642 1 84 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_049400637 chr1:46300805-46304260 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 637 1 84 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_070200284 chr1:46300817-46305886 Sample_02_0702 Bone David_TC71 284 2 109 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_097800646 chr1:46300818-46304358 Sample_02_0978 Brain 2168_IDH1 646 1 85 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_132700131 chr1:46300822-46304268 Sample_02_1327 Hindbrain Hindbrain derived neural stem cells_NS13_H3.3K27M_WT 131 1 82 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_051100354 chr1:46300823-46306063 Sample_02_0511 Prostate LNCaP95_shARv7_ETOH 354 1 112 6 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_094100310 chr1:46300831-46304682 Sample_02_0941 Brain T98G 310 1 87 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_138400436 chr1:46300836-46304058 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 436 1 79 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_046100650 chr1:46300846-46305298 Sample_02_0461 Blood MV-4-11-B cells 650 1 95 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_067300417 chr1:46300873-46305836 Sample_02_0673 Prostate LNCAP_FA 417 1 107 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_050900316 chr1:46300877-46305888 Sample_02_0509 Prostate LNCaP95_shGFP_ETOH 316 2 108 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_080100525 chr1:46300883-46304322 Sample_02_0801 Brain 2235 525 1 82 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_051300108 chr1:46300886-46304196 Sample_02_0513 Prostate LNCaP95_shARfl_ETOH 108 2 81 5 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_001500595 chr1:46300886-46305306 Sample_02_0015 Liver HepG2_shNS 595 1 95 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_064500325 chr1:46300894-46305104 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 325 1 91 5 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_095900160 chr1:46300913-46304429 Sample_02_0959 Brain H3.3K27M_BT245p6_cells 160 1 82 4 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_097400100 chr1:46300916-46304969 Sample_02_0974 Brain H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells 100 1 89 4 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_146900757 chr1:46300921-46305671 Sample_02_1469 Umbilical Vein HUVEC 757 1 101 4 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_098500081 chr1:46300972-46305005 Sample_02_0985 Brain H3.3K27M-DIPGXIII-C14 81 1 89 4 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_065000307 chr1:46300976-46304368 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 307 1 81 4 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_125900625 chr1:46300982-46304167 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 625 1 77 4 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_093400353 chr1:46301018-46304150 Sample_02_0934 Embryo H7-WT 353 1 77 4 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_098300155 chr1:46301061-46304194 Sample_02_0983 Brain H3.3K27M_BT245-C1P5 155 1 77 4 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_098000165 chr1:46301068-46304194 Sample_02_0980 Brain BT245 165 1 77 4 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_043900892 chr1:46301078-46304209 Sample_02_0439 Bone Hu09 892 1 77 4 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_114900319 chr1:46301081-46304072 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 319 1 74 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_068600401 chr1:46301099-46304398 Sample_02_0686 Lung NCI-H128_no infection 401 1 78 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_001400236 chr1:46301101-46304515 Sample_02_0014 Liver HepG2_shBRG1 236 1 81 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_055901009 chr1:46301102-46303470 Sample_02_0559 iPSCs FX52 iPSCs dC-T 1009 1 58 3 0 68 128 LRRC41,UQCRH,NSUN4
SE_02_109400137 chr1:46301107-46304762 Sample_02_1094 Embryo H9_0Dox 137 1 82 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_054600278 chr1:46301112-46305663 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 278 1 96 3 0 75 218 UQCRH,LRRC41,NSUN4
SE_01_010600484 chr1:46301116-46304224 Sample_01_0106 Adrenal gland adrenal gland 54y 484 1 75 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_010600140 chr1:46301118-46303846 Sample_02_0106 Skin NHEK_M 140 1 69 3 0 73 180 UQCRH,LRRC41,NSUN4
SE_02_126701539 chr1:46301120-46304333 Sample_02_1267 Bone Im-GCT-4072_G34W 1539 1 77 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_064600175 chr1:46301131-46304747 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 175 1 82 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_083800382 chr1:46301137-46304324 Sample_02_0838 Embryo hNPCs_WT 382 1 76 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_093300334 chr1:46301143-46304215 Sample_02_0933 Embryo H7 UTXKO 334 1 74 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_132200507 chr1:46301144-46305252 Sample_02_1322 Connective Tissue HT1080_WT 507 1 87 3 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_049500940 chr1:46301150-46303650 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 940 1 61 3 0 70 149 UQCRH,LRRC41,NSUN4
SE_02_079500390 chr1:46301150-46304168 Sample_02_0795 Brain 1953 390 1 73 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_102000394 chr1:46301154-46304294 Sample_02_1020 Mammary gland SUM159 394 1 75 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_107100174 chr1:46301156-46303565 Sample_02_1071 Blood Jurkat_WT 174 1 58 3 0 69 139 LRRC41,UQCRH,NSUN4
SE_02_102700540 chr1:46301174-46304809 Sample_02_1027 Esophagus KYSE180_1 540 1 82 3 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_128300538 chr1:46301176-46304621 Sample_02_1283 Lung NCI-H2107_p8-15 538 1 80 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_093200562 chr1:46301183-46304154 Sample_02_0932 Embryo H9 WT_1 562 1 73 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_096400132 chr1:46301197-46304467 Sample_02_0964 Brain H3.3K27M_HSJ019-Tumor-Rx_brain 132 1 78 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_096100467 chr1:46301204-46303706 Sample_02_0961 Brain H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells 467 1 62 3 0 73 157 UQCRH,LRRC41,NSUN4
SE_02_048600119 chr1:46301207-46303284 Sample_02_0486 Bone marrow HSCe_66y_CD34+,CD38-,Lineage- 119 1 46 3 0 56 96 LRRC41,UQCRH,NSUN4
SE_02_065100220 chr1:46301210-46304296 Sample_02_0651 Tracheobronchial epithelial HTBE_H3N2_18h 220 1 74 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_147700670 chr1:46301215-46304249 Sample_02_1477 Bone EW-22 670 1 74 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_051400113 chr1:46301218-46304105 Sample_02_0514 Prostate LNCaP95_shARfl_DHT 113 1 71 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_074400607 chr1:46301219-46303658 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 607 1 60 3 0 70 151 UQCRH,LRRC41,NSUN4
SE_02_126200340 chr1:46301221-46304229 Sample_02_1262 Bone Im-GCT-3504_G34W 340 1 73 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_052500741 chr1:46301222-46304124 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 741 1 71 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_048700148 chr1:46301223-46304438 Sample_02_0487 Bone marrow HSCe_71y_CD34+,CD38-,Lineage- 148 1 76 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_055800542 chr1:46301225-46303367 Sample_02_0558 iPSCs FX52 iPSCs mock 542 1 52 3 0 64 117 LRRC41,UQCRH,NSUN4
SE_02_064400334 chr1:46301245-46304322 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 334 1 74 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_01_002200260 chr1:46301253-46304292 Sample_01_0022 Prostate C4-2B 260 1 74 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_077400359 chr1:46301253-46304478 Sample_02_0774 Prostate 22Rv1_delSite1_Clone11/12-D8 359 1 78 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_102500696 chr1:46301257-46305686 Sample_02_1025 Esophagus KYSE150 696 1 95 3 0 75 218 UQCRH,LRRC41,NSUN4
SE_02_126000323 chr1:46301262-46304316 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 323 1 74 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_135400865 chr1:46301270-46304310 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 865 1 74 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_130901121 chr1:46301275-46304495 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 1121 1 78 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_114800174 chr1:46301281-46303880 Sample_02_1148 Kidney WT 9-12_control_vehicle 174 1 67 3 0 73 186 UQCRH,LRRC41,NSUN4
SE_02_132600043 chr1:46301292-46303294 Sample_02_1326 Hindbrain Hindbrain derived neural stem cells_NS13_H3.3K27M 43 1 46 3 0 56 98 LRRC41,UQCRH,NSUN4
SE_02_136300638 chr1:46301298-46304591 Sample_02_1363 Blood Hudep2 638 1 79 3 0 73 218 UQCRH,LRRC41,NSUN4
SE_02_107000222 chr1:46301309-46303610 Sample_02_1070 Blood SupT1_WT 222 1 58 3 0 69 147 LRRC41,UQCRH,NSUN4
SE_02_048500281 chr1:46301343-46303303 Sample_02_0485 Bone marrow HSCe_65y_CD34+,CD38-,Lineage- 281 1 49 3 0 59 101 LRRC41,UQCRH,NSUN4
SE_02_103600188 chr1:46301343-46303448 Sample_02_1036 Mammary gland HCC70_XY018 188 1 56 3 0 68 128 LRRC41,UQCRH,NSUN4
SE_02_152000374 chr1:46301353-46303293 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 374 1 46 3 0 56 98 LRRC41,UQCRH,NSUN4
SE_02_103700603 chr1:46301433-46305428 Sample_02_1037 Pharynx FaDu Control 603 1 87 3 0 75 218 UQCRH,LRRC41,NSUN4
Genomic distribution of SEs associated with LRRC41
Genome Browser

The strength of the tissue affected by the gene

Expression of LRRC41

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)