SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900339
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr1:46284550-46306347
Size: 21797
Super-enhancer rank 339
Number of SE elements: 5
ChIP density(Case|Control): 34524.2683|3053.7597
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LRRC41 ;
ROSE Overlap UQCRH ; LRRC41 ;
ROSE Proximal RAD54L ; NSUN4 ;
ROSE Closest LRRC41 ;
Lasso ;
PreSTIGE LRRC41 ; NSUN4 ; RAD54L ; UQCRH ;
ABC ;
BETA RAD54L ; LURAP1 ; NSUN4 ; POMGNT1 ; LRRC41 ; UQCRH ; FAAH ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900339 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers