Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000215162 |
| Gene: | LINC00269 | Gene type: | lncRNA |
| Strand: | + | External links: |
|
| Genomic region: | chrX:69179557-69209924 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_044600514 | chrX:69180801-69263505 |
Sample_02_0446 | Bone | osteosarcoma tumor P2 | 514 | 23 | 1734 | 55 | 6 | 366 | 520 | LINC00269,PJA1 |
| SE_02_055500639 | chrX:69255431-69286635 |
Sample_02_0555 | Other | HAP1_WT | 639 | 6 | 678 | 8 | 0 | 245 | 0 | LINC00269,PJA1 |
| SE_02_093200663 | chrX:69255647-69286998 |
Sample_02_0932 | Embryo | H9 WT_1 | 663 | 6 | 679 | 8 | 0 | 239 | 0 | LINC00269 |
| SE_02_148100158 | chrX:69255686-69324073 |
Sample_02_1481 | Bone | MIC | 158 | 20 | 1545 | 23 | 1 | 403 | 0 | LINC00269,PJA1 |
| SE_02_108400097 | chrX:69255768-69286079 |
Sample_02_1084 | Blood | KBM7-derived near haploid cells | 97 | 15 | 649 | 7 | 0 | 228 | 0 | LINC00269 |
| SE_02_093400437 | chrX:69256028-69286649 |
Sample_02_0934 | Embryo | H7-WT | 437 | 6 | 657 | 8 | 0 | 228 | 0 | LINC00269 |
| SE_02_047600135 | chrX:69267679-69319504 |
Sample_02_0476 | iPSCs | hiPSC derived hepatocyte-like cells | 135 | 18 | 1164 | 15 | 1 | 265 | 0 | LINC00269,PJA1 |
| SE_02_147500199 | chrX:69273013-69319838 |
Sample_02_1475 | Bone | CHLA-25 | 199 | 12 | 1056 | 15 | 1 | 264 | 0 | LINC00269,PJA1 |
| SE_02_105800334 | chrX:69277471-69323743 |
Sample_02_1058 | Bone | A673_SA2 Rescue | 334 | 19 | 1045 | 16 | 1 | 249 | 0 | LINC00269,PJA1 |
| SE_02_147800141 | chrX:69277477-69320926 |
Sample_02_1478 | Bone | EW-3 | 141 | 12 | 987 | 14 | 1 | 243 | 0 | LINC00269,PJA1 |
| SE_02_143300870 | chrX:69277604-69324254 |
Sample_02_1433 | Bone | A673 STAG2 null | 870 | 16 | 1053 | 17 | 1 | 259 | 0 | LINC00269 |
| SE_02_148500340 | chrX:69277655-69319683 |
Sample_02_1485 | Bone | SK-ES-1 | 340 | 13 | 951 | 14 | 1 | 235 | 0 | LINC00269,PJA1 |
| SE_02_148900151 | chrX:69277673-69319636 |
Sample_02_1489 | Bone | TC-106 | 151 | 22 | 950 | 14 | 1 | 235 | 0 | LINC00269,PJA1 |
| SE_02_143200696 | chrX:69277724-69324439 |
Sample_02_1432 | Bone | A673 STAG2 WT | 696 | 19 | 1048 | 17 | 1 | 259 | 0 | LINC00269 |
| SE_02_105900661 | chrX:69277759-69306486 |
Sample_02_1059 | Bone | A673_WT | 661 | 7 | 646 | 9 | 0 | 171 | 0 | LINC00269,PJA1 |
| SE_02_147300665 | chrX:69277759-69306486 |
Sample_02_1473 | Bone | A-673 | 665 | 7 | 646 | 9 | 0 | 171 | 0 | LINC00269,PJA1 |
| SE_02_147700015 | chrX:69277790-69320658 |
Sample_02_1477 | Bone | EW-22 | 15 | 21 | 968 | 14 | 1 | 243 | 0 | LINC00269 |
| SE_02_148300122 | chrX:69277992-69320642 |
Sample_02_1483 | Bone | RD-ES | 122 | 13 | 965 | 14 | 1 | 236 | 0 | LINC00269,PJA1 |
| SE_02_147600195 | chrX:69278148-69325260 |
Sample_02_1476 | Bone | EW-1 | 195 | 17 | 1059 | 17 | 1 | 260 | 0 | LINC00269,PJA1 |
| SE_02_106100237 | chrX:69278171-69323765 |
Sample_02_1061 | Bone | TC71_WT | 237 | 20 | 1034 | 16 | 1 | 240 | 0 | LINC00269,PJA1 |
| SE_02_148800238 | chrX:69278171-69323765 |
Sample_02_1488 | Bone | TC-71 | 238 | 21 | 1034 | 16 | 1 | 240 | 0 | LINC00269,PJA1 |
| SE_02_148000275 | chrX:69278221-69303820 |
Sample_02_1480 | Bone | MHH-ES-1 | 275 | 8 | 569 | 9 | 0 | 156 | 0 | LINC00269,PJA1 |
| SE_02_147400034 | chrX:69278343-69320879 |
Sample_02_1474 | Bone | CHLA-10 | 34 | 8 | 966 | 14 | 1 | 221 | 0 | LINC00269 |
| SE_02_106000338 | chrX:69278358-69306526 |
Sample_02_1060 | Bone | TC71_SA2 KO | 338 | 12 | 637 | 9 | 0 | 147 | 0 | LINC00269,PJA1 |
| SE_02_148600521 | chrX:69278401-69298040 |
Sample_02_1486 | Bone | SK-N-MC | 521 | 8 | 433 | 8 | 0 | 116 | 0 | LINC00269 |
| SE_02_155000157 | chrX:69278503-69319872 |
Sample_02_1550 | Bone | EWS502 | 157 | 20 | 941 | 14 | 1 | 202 | 0 | LINC00269,PJA1 |
| SE_02_070100112 | chrX:69280241-69318117 |
Sample_02_0701 | Bone | David_TC32 | 112 | 16 | 855 | 10 | 1 | 178 | 0 | LINC00269,PJA1 |
| SE_02_128000966 | chrX:69284609-69302906 |
Sample_02_1280 | Bone | Mesenchymal stem cells_SPC_mutation_ EF1 | 966 | 5 | 432 | 9 | 0 | 81 | 0 | LINC00269,PJA1 |
| SE_02_148700136 | chrX:69286382-69302931 |
Sample_02_1487 | Bone | TC-32 | 136 | 9 | 388 | 7 | 0 | 73 | 0 | LINC00269,PJA1 |
| SE_02_148400314 | chrX:69288865-69299963 |
Sample_02_1484 | Bone | Rh1 | 314 | 6 | 256 | 5 | 0 | 58 | 0 | LINC00269 |
Genomic distribution of SEs associated with LINC00269